RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C DSS4P32601 143 aa1.8□□□□□ -2.12
MSH6YDR097C TIF3P34167 436 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C YHR054CP38780 354 aa1.8□□□□□ -2.12
MSH6YDR097C MAM1P40065 302 aa1.8□□□□□ -2.12
MSH6YDR097C ATF1P40353 525 aa1.8□□□□□ -2.12
MSH6YDR097C SEC24P40482 926 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C MPS3P47069 682 aa1.8□□□□□ -2.12
MSH6YDR097C YJR154WP47181 346 aa1.8□□□□□ -2.12
MSH6YDR097C MUP1P50276 574 aa1.8□□□□□ -2.12
MSH6YDR097C MRK1P50873 501 aa1.8□□□□□ -2.12
MSH6YDR097C RPT4P53549 437 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C BNI5P53890 448 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C HEL2Q05580 639 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C RBS1Q05672 457 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C TMA10Q06177 86 aa1.8□□□□□ -2.12
MSH6YDR097C CUE5Q08412 411 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C BUD7Q08754 746 aa1.8□□□□□ -2.12
MSH6YDR097C CHS5Q12114 671 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C RRP36Q12481 300 aaPredicted RBP1.8□□□□□ -2.12
MSH6YDR097C BUD5P25300 642 aaPredicted RBP1.79□□□□□ -2.12
MSH6YDR097C RRP7P25368 297 aaPredicted RBP1.79□□□□□ -2.12
MSH6YDR097C NUP133P36161 1157 aa1.79□□□□□ -2.12
MSH6YDR097C WSS1P38838 269 aa1.79□□□□□ -2.12
MSH6YDR097C RPS10BP46784 105 aaKnown RBP1.79□□□□□ -2.12
MSH6YDR097C NPA3P47122 385 aa1.79□□□□□ -2.12
MSH6YDR097C YGL036WP53185 909 aaPredicted RBP1.79□□□□□ -2.12
MSH6YDR097C DAK1P54838 584 aaKnown RBP1.79□□□□□ -2.12
MSH6YDR097C RPN9Q04062 393 aaKnown RBP1.79□□□□□ -2.12
MSH6YDR097C YDR109CQ04585 715 aa1.79□□□□□ -2.12
MSH6YDR097C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
MSH6YDR097C RPN5Q12250 445 aaKnown RBP1.79□□□□□ -2.12
MSH6YDR097C YLR358CO13565 187 aa1.79□□□□□ -2.12
MSH6YDR097C YBR085C-AO43137 85 aa1.79□□□□□ -2.12
MSH6YDR097C CLB1P24868 471 aa1.79□□□□□ -2.12
MSH6YDR097C NTR2P36118 322 aaPredicted RBP1.79□□□□□ -2.12
MSH6YDR097C ARO9P38840 513 aaPredicted RBP1.79□□□□□ -2.12
MSH6YDR097C EXO1P39875 702 aa1.79□□□□□ -2.12
MSH6YDR097C PKP1P40530 394 aa1.79□□□□□ -2.12
MSH6YDR097C PAN2P53010 1115 aaPredicted RBP1.79□□□□□ -2.12
MSH6YDR097C VPS73P53142 486 aaKnown RBP1.79□□□□□ -2.12
MSH6YDR097C NCS2P53923 493 aaPredicted RBP1.79□□□□□ -2.12
MSH6YDR097C PIG1Q06216 648 aa1.79□□□□□ -2.12
MSH6YDR097C APL5Q08951 932 aaKnown RBP1.79□□□□□ -2.12
MSH6YDR097C SWT1Q12104 458 aa1.79□□□□□ -2.12
MSH6YDR097C MRH1Q12117 320 aaPredicted RBP1.79□□□□□ -2.12
MSH6YDR097C USV1Q12132 391 aa1.79□□□□□ -2.12
MSH6YDR097C YDR061WQ12298 539 aa1.79□□□□□ -2.12
MSH6YDR097C YMR084WA2P2R3 262 aa1.79□□□□□ -2.12
MSH6YDR097C VMA16P23968 213 aa1.79□□□□□ -2.12
MSH6YDR097C GSH1P32477 678 aa1.79□□□□□ -2.12
MSH6YDR097C YME1P32795 747 aa1.79□□□□□ -2.12
MSH6YDR097C PMT1P33775 817 aa1.79□□□□□ -2.12
MSH6YDR097C PHO11P35842 467 aa1.79□□□□□ -2.12
MSH6YDR097C AUR1P36107 401 aaPredicted RBP1.79□□□□□ -2.12
MSH6YDR097C PXL1P36166 706 aa1.79□□□□□ -2.12
MSH6YDR097C PHO12P38693 467 aa1.79□□□□□ -2.12
MSH6YDR097C UBA4P38820 440 aa1.79□□□□□ -2.12
MSH6YDR097C CDC40P40968 455 aaPredicted RBP1.79□□□□□ -2.12
MSH6YDR097C PTR3P43606 678 aa1.79□□□□□ -2.12
MSH6YDR097C VID30P53076 958 aa1.79□□□□□ -2.12
MSH6YDR097C YGR066CP53242 292 aa1.79□□□□□ -2.12
MSH6YDR097C CWC22P53333 577 aaKnown RBP1.79□□□□□ -2.12
MSH6YDR097C ARX1Q03862 593 aaKnown RBP1.79□□□□□ -2.12
MSH6YDR097C RSF1Q05043 376 aa1.79□□□□□ -2.12
MSH6YDR097C MDM30Q05930 598 aa1.79□□□□□ -2.12
MSH6YDR097C YLR040CQ07988 224 aa1.79□□□□□ -2.12
MSH6YDR097C RTC1Q08281 1341 aa1.79□□□□□ -2.12
MSH6YDR097C HKR1P41809 1802 aa1.78□□□□□ -2.12
MSH6YDR097C ILV2P07342 687 aaKnown RBP1.78□□□□□ -2.12
MSH6YDR097C MGM1P32266 881 aa1.78□□□□□ -2.12
MSH6YDR097C SSE2P32590 693 aaKnown RBP1.78□□□□□ -2.12
MSH6YDR097C GYP6P32806 458 aa1.78□□□□□ -2.12
MSH6YDR097C SPC34P36131 295 aa1.78□□□□□ -2.12
MSH6YDR097C VID24P38263 362 aa1.78□□□□□ -2.12
MSH6YDR097C YMR160WQ03823 816 aa1.78□□□□□ -2.12
MSH6YDR097C RBA50Q04418 439 aa1.78□□□□□ -2.12
MSH6YDR097C ADE13Q05911 482 aaKnown RBP1.78□□□□□ -2.12
MSH6YDR097C PML1Q07930 204 aaPredicted RBP1.78□□□□□ -2.12
MSH6YDR097C IRC13Q08630 104 aa1.78□□□□□ -2.12
MSH6YDR097C AFT2Q08957 416 aa1.78□□□□□ -2.12
MSH6YDR097C MDY2Q12285 212 aa1.78□□□□□ -2.12
MSH6YDR097C PFK27Q12471 397 aaPredicted RBP1.78□□□□□ -2.12
MSH6YDR097C YER175W-AQ8TGU4 54 aa1.78□□□□□ -2.12
MSH6YDR097C RAV1P47104 1357 aa1.78□□□□□ -2.12
MSH6YDR097C TY1B-AO13527 1196 aaKnown RBP1.78□□□□□ -2.12
MSH6YDR097C POT1P27796 417 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
MSH6YDR097C GAC1P28006 793 aa1.78□□□□□ -2.12
MSH6YDR097C AFG1P32317 509 aa1.78□□□□□ -2.12
MSH6YDR097C NTH1P32356 751 aa1.78□□□□□ -2.12
MSH6YDR097C MTR2P34232 184 aaKnown RBP1.78□□□□□ -2.12
MSH6YDR097C LOT5P34234 306 aa1.78□□□□□ -2.12
MSH6YDR097C MIA40P36046 403 aa1.78□□□□□ -2.12
MSH6YDR097C GLG1P36143 616 aa1.78□□□□□ -2.12
MSH6YDR097C PIG2P40187 538 aa1.78□□□□□ -2.12
MSH6YDR097C ASG1P40467 964 aa1.78□□□□□ -2.12
MSH6YDR097C IME4P41833 600 aa1.78□□□□□ -2.12
MSH6YDR097C THI6P41835 540 aa1.78□□□□□ -2.12
MSH6YDR097C CTK2P46962 323 aa1.78□□□□□ -2.12
MSH6YDR097C LYS20P48570 428 aaKnown RBP1.78□□□□□ -2.12
MSH6YDR097C MLC1P53141 149 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms