RNA–Protein interactions for RNA: YDR092W

UBC13, Transcript of E2 ubiquitin-conjugating enzyme, yeastyeast

Gene UBC13, Length 462 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC13YDR092W PDA1P16387 420 aaKnown RBP3.34□□□□□ -1.87
UBC13YDR092W SEC62P21825 274 aa3.34□□□□□ -1.87
UBC13YDR092W PAH1P32567 862 aa3.34□□□□□ -1.87
UBC13YDR092W ECM15P35195 104 aa3.34□□□□□ -1.87
UBC13YDR092W MDM31P38880 579 aa3.34□□□□□ -1.87
UBC13YDR092W YER130CP39959 443 aa3.34□□□□□ -1.87
UBC13YDR092W VID27P40157 782 aa3.34□□□□□ -1.87
UBC13YDR092W TMA108P40462 946 aa3.34□□□□□ -1.87
UBC13YDR092W VID30P53076 958 aa3.34□□□□□ -1.87
UBC13YDR092W DUO1P53168 247 aaKnown RBP3.34□□□□□ -1.87
UBC13YDR092W PPT2Q12036 173 aa3.34□□□□□ -1.87
UBC13YDR092W KAR3P17119 729 aa3.33□□□□□ -1.88
UBC13YDR092W KGD1P20967 1014 aaKnown RBP3.33□□□□□ -1.88
UBC13YDR092W POL4P25615 582 aa3.33□□□□□ -1.88
UBC13YDR092W SYN8P31377 255 aa3.33□□□□□ -1.88
UBC13YDR092W MUD2P36084 527 aaKnown RBP3.33□□□□□ -1.88
UBC13YDR092W SNG1P46950 547 aa3.33□□□□□ -1.88
UBC13YDR092W IKS1P47042 667 aa3.33□□□□□ -1.88
UBC13YDR092W YPL014WQ02606 381 aa3.33□□□□□ -1.88
UBC13YDR092W RPM2Q02773 1202 aa3.33□□□□□ -1.88
UBC13YDR092W HCR1Q05775 265 aaKnown RBP3.33□□□□□ -1.88
UBC13YDR092W DIC1Q06143 298 aa3.33□□□□□ -1.88
UBC13YDR092W YEH1Q07804 573 aa3.33□□□□□ -1.88
UBC13YDR092W RCN2Q12044 265 aa3.33□□□□□ -1.88
UBC13YDR092W SPE4Q12455 300 aa3.33□□□□□ -1.88
UBC13YDR092W YMR230W-AQ3E7B5 62 aa3.33□□□□□ -1.88
UBC13YDR092W ART10P18634 518 aaKnown RBP3.32□□□□□ -1.88
UBC13YDR092W SGF29P25554 259 aa3.32□□□□□ -1.88
UBC13YDR092W YHR210CP38893 341 aa3.32□□□□□ -1.88
UBC13YDR092W DHH1P39517 506 aaKnown RBP3.32□□□□□ -1.88
UBC13YDR092W ALK1P43633 760 aaKnown RBP3.32□□□□□ -1.88
UBC13YDR092W YGR066CP53242 292 aa3.32□□□□□ -1.88
UBC13YDR092W RBA50Q04418 439 aa3.32□□□□□ -1.88
UBC13YDR092W YBR298C-AQ8TGK4 73 aa3.32□□□□□ -1.88
UBC13YDR092W CAR1P00812 333 aaKnown RBP3.31□□□□□ -1.88
UBC13YDR092W MTF1P14908 341 aaKnown RBP3.31□□□□□ -1.88
UBC13YDR092W GFD2P25370 566 aaKnown RBP3.31□□□□□ -1.88
UBC13YDR092W SEF1P34228 1148 aa3.31□□□□□ -1.88
UBC13YDR092W UBP11P36026 717 aa3.31□□□□□ -1.88
UBC13YDR092W YBP1P38315 674 aa3.31□□□□□ -1.88
UBC13YDR092W ALG5P40350 334 aa3.31□□□□□ -1.88
UBC13YDR092W YJR154WP47181 346 aa3.31□□□□□ -1.88
UBC13YDR092W MSC1Q03104 513 aa3.31□□□□□ -1.88
UBC13YDR092W ERP1Q05359 219 aaKnown RBP3.31□□□□□ -1.88
UBC13YDR092W BRR1Q99177 341 aaPredicted RBP3.31□□□□□ -1.88
UBC13YDR092W YPT6Q99260 215 aa3.31□□□□□ -1.88
UBC13YDR092W APE1P14904 514 aa3.3□□□□□ -1.88
UBC13YDR092W EXO70P19658 623 aa3.3□□□□□ -1.88
UBC13YDR092W RPS2P25443 254 aaKnown RBP3.3□□□□□ -1.88
UBC13YDR092W BUD14P27637 709 aa3.3□□□□□ -1.88
UBC13YDR092W PAP1P29468 568 aaKnown RBP3.3□□□□□ -1.88
UBC13YDR092W NDC1P32500 655 aa3.3□□□□□ -1.88
UBC13YDR092W SIP2P34164 415 aaKnown RBP3.3□□□□□ -1.88
UBC13YDR092W OSH3P38713 996 aaKnown RBP3.3□□□□□ -1.88
UBC13YDR092W DSD1P53095 428 aa3.3□□□□□ -1.88
UBC13YDR092W TOF2Q02208 771 aa3.3□□□□□ -1.88
UBC13YDR092W FIN1Q03898 291 aa3.3□□□□□ -1.88
UBC13YDR092W SCW10Q04951 389 aa3.3□□□□□ -1.88
UBC13YDR092W YDR056CQ12025 205 aa3.3□□□□□ -1.88
UBC13YDR092W YJR112W-AQ3E743 109 aa3.3□□□□□ -1.88
UBC13YDR092W MRS3P10566 314 aa3.29□□□□□ -1.88
UBC13YDR092W PTR2P32901 601 aa3.29□□□□□ -1.88
UBC13YDR092W SHP1P34223 423 aa3.29□□□□□ -1.88
UBC13YDR092W CCT6P39079 546 aa3.29□□□□□ -1.88
UBC13YDR092W ROK1P45818 564 aaPredicted RBP3.29□□□□□ -1.88
UBC13YDR092W RTT101P47050 842 aa3.29□□□□□ -1.88
UBC13YDR092W YDL057WQ07379 328 aa3.29□□□□□ -1.88
UBC13YDR092W YOR365CQ08844 703 aa3.29□□□□□ -1.88
UBC13YDR092W CTI6Q08923 506 aa3.29□□□□□ -1.88
UBC13YDR092W NCE102Q12207 173 aaRIP-Chip data3.29□□□□□ -1.88not detected
UBC13YDR092W YDL009CQ12210 107 aa3.29□□□□□ -1.88
UBC13YDR092W RPL15AP05748 204 aaKnown RBP3.28□□□□□ -1.88
UBC13YDR092W EST1P17214 699 aaPredicted RBP3.28□□□□□ -1.88
UBC13YDR092W YCR007CP25354 239 aa3.28□□□□□ -1.88
UBC13YDR092W TIF3P34167 436 aaKnown RBP3.28□□□□□ -1.88
UBC13YDR092W REG2P38232 338 aa3.28□□□□□ -1.88
UBC13YDR092W MSR1P38714 643 aa3.28□□□□□ -1.88
UBC13YDR092W YJL132WP47014 750 aa3.28□□□□□ -1.88
UBC13YDR092W LCL3P53153 274 aa3.28□□□□□ -1.88
UBC13YDR092W RBG2P53295 368 aaKnown RBP3.28□□□□□ -1.88
UBC13YDR092W IPI3P53877 555 aa3.28□□□□□ -1.88
UBC13YDR092W IMP4P53941 290 aaKnown RBP3.28□□□□□ -1.88
UBC13YDR092W NGL3Q03210 505 aa3.28□□□□□ -1.88
UBC13YDR092W BNA5Q05979 453 aa3.28□□□□□ -1.88
UBC13YDR092W VPS74Q06385 345 aa3.28□□□□□ -1.88
UBC13YDR092W SYO1Q07395 620 aa3.28□□□□□ -1.88
UBC13YDR092W LSP1Q12230 341 aaKnown RBP3.28□□□□□ -1.88
UBC13YDR092W AVL9Q12500 764 aa3.28□□□□□ -1.88
UBC13YDR092W SET6Q12529 373 aa3.28□□□□□ -1.88
UBC13YDR092W HSH49Q99181 213 aaPredicted RBP3.28□□□□□ -1.88
UBC13YDR092W SGS1P35187 1447 aa3.27□□□□□ -1.89
UBC13YDR092W PEP4P07267 405 aaKnown RBP3.27□□□□□ -1.89
UBC13YDR092W DFR1P07807 211 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
UBC13YDR092W MRP13P12686 339 aa3.27□□□□□ -1.89
UBC13YDR092W HSC82P15108 705 aaKnown RBP3.27□□□□□ -1.89
UBC13YDR092W AAC3P18238 307 aa3.27□□□□□ -1.89
UBC13YDR092W SAN1P22470 610 aa3.27□□□□□ -1.89
UBC13YDR092W CPR3P25719 182 aa3.27□□□□□ -1.89
UBC13YDR092W PEP3P27801 918 aa3.27□□□□□ -1.89
UBC13YDR092W IMP2'P32351 346 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms