RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C MNT2P53059 558 aa4.54□□□□□ -1.68
CDC48YDL126C ESBP6P53918 673 aa4.54□□□□□ -1.68
CDC48YDL126C MRPL13Q02204 264 aa4.54□□□□□ -1.68
CDC48YDL126C ABZ2Q03266 374 aa4.54□□□□□ -1.68
CDC48YDL126C CRR1Q05790 422 aa4.54□□□□□ -1.68
CDC48YDL126C OSW2Q12202 724 aa4.54□□□□□ -1.68
CDC48YDL126C STF1P01098 86 aa4.53□□□□□ -1.68
CDC48YDL126C PRE10P21242 288 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
CDC48YDL126C ISY1P21374 235 aaPredicted RBP4.53□□□□□ -1.68
CDC48YDL126C YCK2P23292 546 aaKnown RBP4.53□□□□□ -1.68
CDC48YDL126C DMC1P25453 334 aa4.53□□□□□ -1.68
CDC48YDL126C YCR016WP25617 290 aaKnown RBP4.53□□□□□ -1.68
CDC48YDL126C IMG2P25642 146 aaPredicted RBP4.53□□□□□ -1.68
CDC48YDL126C PDB1P32473 366 aaKnown RBP4.53□□□□□ -1.68
CDC48YDL126C ATP3P38077 311 aaKnown RBP4.53□□□□□ -1.68
CDC48YDL126C PPS1P38148 807 aa4.53□□□□□ -1.68
CDC48YDL126C FZO1P38297 855 aa4.53□□□□□ -1.68
CDC48YDL126C SIP3P38717 1229 aa4.53□□□□□ -1.68
CDC48YDL126C MKT1P40850 830 aaKnown RBP4.53□□□□□ -1.68
CDC48YDL126C YNR071CP53757 342 aa4.53□□□□□ -1.68
CDC48YDL126C ORC4P54791 529 aa4.53□□□□□ -1.68
CDC48YDL126C GAD1Q04792 585 aa4.53□□□□□ -1.68
CDC48YDL126C MSC3Q05812 728 aa4.53□□□□□ -1.68
CDC48YDL126C YPL216WQ08964 1102 aa4.53□□□□□ -1.68
CDC48YDL126C LPX1Q12405 387 aaKnown RBP4.53□□□□□ -1.68
CDC48YDL126C STE3P06783 470 aa4.53□□□□□ -1.68
CDC48YDL126C PHO3P24031 467 aa4.53□□□□□ -1.68
CDC48YDL126C TGL1P34163 548 aa4.53□□□□□ -1.68
CDC48YDL126C HCS1P34243 683 aa4.53□□□□□ -1.68
CDC48YDL126C UTP11P34247 250 aaPredicted RBP4.53□□□□□ -1.68
CDC48YDL126C RPC25P35718 212 aa4.53□□□□□ -1.68
CDC48YDL126C ECM4P36156 370 aa4.53□□□□□ -1.68
CDC48YDL126C ULP2P40537 1034 aaPredicted RBP4.53□□□□□ -1.68
CDC48YDL126C MMM1P41800 426 aa4.53□□□□□ -1.68
CDC48YDL126C TOS3P43637 560 aa4.53□□□□□ -1.68
CDC48YDL126C GCV2P49095 1034 aa4.53□□□□□ -1.68
CDC48YDL126C PSP2P50109 593 aaKnown RBP4.53□□□□□ -1.68
CDC48YDL126C YGR067CP53243 804 aa4.53□□□□□ -1.68
CDC48YDL126C VPS38Q05919 439 aa4.53□□□□□ -1.68
CDC48YDL126C YOL075CQ08234 1294 aa4.53□□□□□ -1.68
CDC48YDL126C YPL272CQ08984 517 aa4.53□□□□□ -1.68
CDC48YDL126C YLR358CO13565 187 aa4.52□□□□□ -1.69
CDC48YDL126C SEC66P33754 206 aa4.52□□□□□ -1.69
CDC48YDL126C PMT1P33775 817 aa4.52□□□□□ -1.69
CDC48YDL126C OCT1P35999 772 aa4.52□□□□□ -1.69
CDC48YDL126C GEX2P36173 615 aa4.52□□□□□ -1.69
CDC48YDL126C VMA22P38784 181 aa4.52□□□□□ -1.69
CDC48YDL126C SCS2P40075 244 aaKnown RBP4.52□□□□□ -1.69
CDC48YDL126C YIL077CP40508 320 aa4.52□□□□□ -1.69
CDC48YDL126C RBL2P48606 106 aaKnown RBP4.52□□□□□ -1.69
CDC48YDL126C BIO3P50277 480 aa4.52□□□□□ -1.69
CDC48YDL126C SAP4P53036 818 aa4.52□□□□□ -1.69
CDC48YDL126C YGR054WP53235 642 aaKnown RBP4.52□□□□□ -1.69
CDC48YDL126C MNT4P53745 580 aa4.52□□□□□ -1.69
CDC48YDL126C VBA4Q04602 768 aaKnown RBP4.52□□□□□ -1.69
CDC48YDL126C RGC1Q06108 1083 aaKnown RBP4.52□□□□□ -1.69
CDC48YDL126C WHI4Q07655 649 aaKnown RBP4.52□□□□□ -1.69
CDC48YDL126C ARP6Q12509 438 aa4.52□□□□□ -1.69
CDC48YDL126C SOD2P00447 233 aa4.52□□□□□ -1.69
CDC48YDL126C PRB1P09232 635 aa4.52□□□□□ -1.69
CDC48YDL126C TPS2P31688 896 aaKnown RBP4.52□□□□□ -1.69
CDC48YDL126C STB6P36085 766 aa4.52□□□□□ -1.69
CDC48YDL126C KHA1P40309 873 aa4.52□□□□□ -1.69
CDC48YDL126C STB2P46679 850 aa4.52□□□□□ -1.69
CDC48YDL126C TRS85P46944 698 aa4.52□□□□□ -1.69
CDC48YDL126C MPS2P53159 387 aa4.52□□□□□ -1.69
CDC48YDL126C YGR012WP53206 393 aa4.52□□□□□ -1.69
CDC48YDL126C DIP5P53388 608 aa4.52□□□□□ -1.69
CDC48YDL126C DAK1P54838 584 aaKnown RBP4.52□□□□□ -1.69
CDC48YDL126C ADA2Q02336 434 aa4.52□□□□□ -1.69
CDC48YDL126C PLP1Q04004 230 aa4.52□□□□□ -1.69
CDC48YDL126C NMD4Q12129 218 aa4.52□□□□□ -1.69
CDC48YDL126C YOR019WQ99248 730 aa4.52□□□□□ -1.69
CDC48YDL126C SAM1P10659 382 aaKnown RBP4.51□□□□□ -1.69
CDC48YDL126C DBF4P32325 704 aa4.51□□□□□ -1.69
CDC48YDL126C NGG1P32494 702 aa4.51□□□□□ -1.69
CDC48YDL126C SRP101P32916 621 aa4.51□□□□□ -1.69
CDC48YDL126C YHR097CP38809 366 aaKnown RBP4.51□□□□□ -1.69
CDC48YDL126C ALD5P40047 520 aaKnown RBP4.51□□□□□ -1.69
CDC48YDL126C VFA1P40080 203 aa4.51□□□□□ -1.69
CDC48YDL126C SDP1P40479 209 aa4.51□□□□□ -1.69
CDC48YDL126C ECL1P48235 211 aa4.51□□□□□ -1.69
CDC48YDL126C APT1P49435 187 aaKnown RBP4.51□□□□□ -1.69
CDC48YDL126C GIM3P53900 129 aa4.51□□□□□ -1.69
CDC48YDL126C ADE13Q05911 482 aaKnown RBP4.51□□□□□ -1.69
CDC48YDL126C SPH1Q06160 661 aa4.51□□□□□ -1.69
CDC48YDL126C YPR196WQ06595 470 aa4.51□□□□□ -1.69
CDC48YDL126C BRX1Q08235 291 aaKnown RBP4.51□□□□□ -1.69
CDC48YDL126C TCO89Q08921 799 aa4.51□□□□□ -1.69
CDC48YDL126C UPC2Q12151 913 aa4.51□□□□□ -1.69
CDC48YDL126C GPM3Q12326 303 aa4.51□□□□□ -1.69
CDC48YDL126C OCA6Q12454 224 aa4.51□□□□□ -1.69
CDC48YDL126C CLN3P13365 580 aa4.51□□□□□ -1.69
CDC48YDL126C MSB1P21339 1137 aaKnown RBP4.51□□□□□ -1.69
CDC48YDL126C CRM1P30822 1084 aaKnown RBP4.51□□□□□ -1.69
CDC48YDL126C GDA1P32621 518 aa4.51□□□□□ -1.69
CDC48YDL126C YKL023WP36103 277 aaKnown RBP4.51□□□□□ -1.69
CDC48YDL126C VAB2P40003 282 aa4.51□□□□□ -1.69
CDC48YDL126C BUD8P41698 603 aa4.51□□□□□ -1.69
CDC48YDL126C CCT7P42943 550 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms