RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	CRZ1	P53968	678 aa		3.12	□□□□□ -1.91
PBP4	YDL053C	SAM50	P53969	484 aa		3.12	□□□□□ -1.91
PBP4	YDL053C	RHO4	Q00246	291 aa		3.12	□□□□□ -1.91
PBP4	YDL053C	YMR230W-A	Q3E7B5	62 aa		3.12	□□□□□ -1.91
PBP4	YDL053C	PHO2	P07269	559 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	SEC53	P07283	254 aa	Known RBP	3.11	□□□□□ -1.91
PBP4	YDL053C	YML002W	P0CF17	737 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	MRP13	P12686	339 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	PDA1	P16387	420 aa	Known RBP	3.11	□□□□□ -1.91
PBP4	YDL053C	GFD2	P25370	566 aa	Known RBP	3.11	□□□□□ -1.91
PBP4	YDL053C	SGF29	P25554	259 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	ECM15	P35195	104 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	YKL023W	P36103	277 aa	Known RBP	3.11	□□□□□ -1.91
PBP4	YDL053C	CIN4	P39110	191 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	TMA108	P40462	946 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	BUD32	P53323	261 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	YMR087W	Q04299	284 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	YTH1	Q06102	208 aa	Predicted RBP	3.11	□□□□□ -1.91
PBP4	YDL053C	YDL121C	Q07541	149 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	YEH1	Q07804	573 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	YEH2	Q07950	538 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	THI20	Q08224	551 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	YPT6	Q99260	215 aa		3.11	□□□□□ -1.91
PBP4	YDL053C	MRS3	P10566	314 aa		3.1	□□□□□ -1.91
PBP4	YDL053C	EST1	P17214	699 aa	Predicted RBP	3.1	□□□□□ -1.91
PBP4	YDL053C	OLE1	P21147	510 aa	Known RBP	3.1	□□□□□ -1.91
PBP4	YDL053C	SEC62	P21825	274 aa		3.1	□□□□□ -1.91
PBP4	YDL053C	VPS17	P32913	551 aa		3.1	□□□□□ -1.91
PBP4	YDL053C	NOP4	P37838	685 aa	Known RBP	3.1	□□□□□ -1.91
PBP4	YDL053C	CCT4	P39078	528 aa	Known RBP	3.1	□□□□□ -1.91
PBP4	YDL053C	MRX6	P48564	524 aa		3.1	□□□□□ -1.91
PBP4	YDL053C	YGL082W	P53155	381 aa		3.1	□□□□□ -1.91
PBP4	YDL053C	IPI3	P53877	555 aa		3.1	□□□□□ -1.91
PBP4	YDL053C	SHR3	Q02774	210 aa		3.1	□□□□□ -1.91
PBP4	YDL053C	RPC11	Q04307	110 aa	Predicted RBP	3.1	□□□□□ -1.91
PBP4	YDL053C	YDL057W	Q07379	328 aa		3.1	□□□□□ -1.91
PBP4	YDL053C	SDH5	Q08230	162 aa		3.1	□□□□□ -1.91
PBP4	YDL053C	NCE102	Q12207	173 aa	RIP-Chip data	3.1	□□□□□ -1.91	not detected
PBP4	YDL053C	PEP5	P12868	1029 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	ART10	P18634	518 aa	Known RBP	3.09	□□□□□ -1.91
PBP4	YDL053C	SUI2	P20459	304 aa	Known RBP	3.09	□□□□□ -1.91
PBP4	YDL053C	SEF1	P34228	1148 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	YHR210C	P38893	341 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	YTA12	P40341	825 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	ALG5	P40350	334 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
PBP4	YDL053C	IKS1	P47042	667 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	IMD4	P50094	524 aa	Known RBP	3.09	□□□□□ -1.91
PBP4	YDL053C	VID30	P53076	958 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	DRN1	P53255	507 aa	Known RBP	3.09	□□□□□ -1.91
PBP4	YDL053C	RTT103	Q05543	409 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	GLO2	Q05584	274 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	COQ9	Q05779	260 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	CDC45	Q08032	650 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	YOR365C	Q08844	703 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	CTI6	Q08923	506 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	RCN2	Q12044	265 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	YJR112W-A	Q3E743	109 aa		3.09	□□□□□ -1.91
PBP4	YDL053C	PEP4	P07267	405 aa	Known RBP	3.08	□□□□□ -1.92
PBP4	YDL053C	RGT1	P32862	1170 aa		3.08	□□□□□ -1.92
PBP4	YDL053C	SIP2	P34164	415 aa	Known RBP	3.08	□□□□□ -1.92
PBP4	YDL053C	YNK1	P36010	153 aa	Known RBP	3.08	□□□□□ -1.92
PBP4	YDL053C	REG2	P38232	338 aa		3.08	□□□□□ -1.92
PBP4	YDL053C	DHH1	P39517	506 aa	Known RBP	3.08	□□□□□ -1.92
PBP4	YDL053C	CSM2	P40465	213 aa		3.08	□□□□□ -1.92
PBP4	YDL053C	YJR154W	P47181	346 aa		3.08	□□□□□ -1.92
PBP4	YDL053C	ALT2	P52892	507 aa		3.08	□□□□□ -1.92
PBP4	YDL053C	RPM2	Q02773	1202 aa		3.08	□□□□□ -1.92
PBP4	YDL053C	HCR1	Q05775	265 aa	Known RBP	3.08	□□□□□ -1.92
PBP4	YDL053C	RAD52	P06778	471 aa	Known RBP	3.07	□□□□□ -1.92
PBP4	YDL053C	CBS1	P14066	229 aa		3.07	□□□□□ -1.92
PBP4	YDL053C	APE1	P14904	514 aa		3.07	□□□□□ -1.92
PBP4	YDL053C	ELO2	P25358	347 aa		3.07	□□□□□ -1.92
PBP4	YDL053C	PRO3	P32263	286 aa	Known RBP	3.07	□□□□□ -1.92
PBP4	YDL053C	TCD2	P36101	447 aa	Known RBP	3.07	□□□□□ -1.92
PBP4	YDL053C	OSH3	P38713	996 aa	Known RBP	3.07	□□□□□ -1.92
PBP4	YDL053C	VPS52	P39904	641 aa		3.07	□□□□□ -1.92
PBP4	YDL053C	AIM22	P47051	409 aa		3.07	□□□□□ -1.92
PBP4	YDL053C	VPS75	P53853	264 aa		3.07	□□□□□ -1.92
PBP4	YDL053C	BUD21	Q08492	214 aa	Predicted RBP	3.07	□□□□□ -1.92
PBP4	YDL053C	RLM1	Q12224	676 aa		3.07	□□□□□ -1.92
PBP4	YDL053C	YBR298C-A	Q8TGK4	73 aa		3.07	□□□□□ -1.92
PBP4	YDL053C	HSH49	Q99181	213 aa	Predicted RBP	3.07	□□□□□ -1.92
PBP4	YDL053C	RPL15A	P05748	204 aa	Known RBP	3.06	□□□□□ -1.92
PBP4	YDL053C	AMD1	P15274	810 aa	Known RBP	3.06	□□□□□ -1.92
PBP4	YDL053C	MET8	P15807	274 aa		3.06	□□□□□ -1.92
PBP4	YDL053C	PEP3	P27801	918 aa		3.06	□□□□□ -1.92
PBP4	YDL053C	IMP2'	P32351	346 aa		3.06	□□□□□ -1.92
PBP4	YDL053C	NDC1	P32500	655 aa		3.06	□□□□□ -1.92
PBP4	YDL053C	LOS1	P33418	1100 aa	Predicted RBP	3.06	□□□□□ -1.92
PBP4	YDL053C	SRO77	P38163	1010 aa		3.06	□□□□□ -1.92
PBP4	YDL053C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	RIP-Chip
PBP4	YDL053C	YGR066C	P53242	292 aa		3.06	□□□□□ -1.92
PBP4	YDL053C	TOF2	Q02208	771 aa		3.06	□□□□□ -1.92
PBP4	YDL053C	VPS38	Q05919	439 aa		3.06	□□□□□ -1.92
PBP4	YDL053C	IMH1	Q06704	911 aa	Known RBP	3.06	□□□□□ -1.92
PBP4	YDL053C	SUC2	P00724	532 aa		3.05	□□□□□ -1.92
PBP4	YDL053C	GCN4	P03069	281 aa		3.05	□□□□□ -1.92
PBP4	YDL053C	GAL80	P04387	435 aa		3.05	□□□□□ -1.92
PBP4	YDL053C	TOP1	P04786	769 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms