RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 CNPY4Q8N129 248 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 RABGGTAQ92696 567 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 ZFYVE1Q9HBF4 777 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 STRN4Q9NRL3 753 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 HYPKQ9NX55 129 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 SNX14Q9Y5W7 946 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 EVC2Q86UK5 1308 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 KHNYNO15037 678 aaKnown RBP6.73□□□□□ -1.33
CASC19-260ENST00000641828 PF4P02776 101 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 NFKB1P19838 968 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 GARTP22102 1010 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 SFPQP23246 707 aaKnown RBP eCLIP6.73□□□□□ -1.33
CASC19-260ENST00000641828 HSP90AB3PQ58FF7 597 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 ANKS3Q6ZW76 656 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 HNRNPLLQ8WVV9 542 aaKnown RBP6.73□□□□□ -1.33
CASC19-260ENST00000641828 DNAAF4Q8WXU2 420 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 CCDC34Q96HJ3 373 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 MPHOSPH8Q99549 860 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 LRRCC1Q9C099 1032 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 CEP44Q9C0F1 390 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 NAT10Q9H0A0 1025 aaKnown RBP6.73□□□□□ -1.33
CASC19-260ENST00000641828 TLR7Q9NYK1 1049 aaKnown RBP6.73□□□□□ -1.33
CASC19-260ENST00000641828 UBP1Q9NZI7 540 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 DNMT3LQ9UJW3 386 aa6.73□□□□□ -1.33
CASC19-260ENST00000641828 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.73□□□□□ -1.33
CASC19-260ENST00000641828 MRPL42Q9Y6G3 142 aaKnown RBP6.73□□□□□ -1.33
CASC19-260ENST00000641828 SRGAP3O43295 1099 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 GREM1O60565 184 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 EIF3JO75822 258 aaKnown RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 URI1O94763 535 aaPredicted RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 GNAI3P08754 354 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 YBX3P16989 372 aaKnown RBP eCLIP6.72□□□□□ -1.33
CASC19-260ENST00000641828 CALRP27797 417 aaKnown RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 POLD1P28340 1107 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 GRIA4P48058 902 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 EIF5P55010 431 aaKnown RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 TUBB4BP68371 445 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 HTRA3P83110 453 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 HYAL2Q12891 473 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 DNAJC21Q5F1R6 531 aaKnown RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 GORABQ5T7V8 394 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 RSRC2Q7L4I2 434 aaKnown RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 TADA2BQ86TJ2 420 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 EGFL6Q8IUX8 553 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 CCDC83Q8IWF9 413 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 C8orf58Q8NAV2 365 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 LEO1Q8WVC0 666 aaPredicted RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 MKL1Q969V6 931 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 PRAM1Q96QH2 718 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 CARD6Q9BX69 1037 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 TM6SF1Q9BZW5 370 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 ANO10Q9NW15 660 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 PCDHGC4Q9Y5F7 938 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 SBF2Q86WG5 1849 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 SGSM2O43147 1006 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 PPFIA4O75335 1185 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 THBS1P07996 1170 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 HSPA1AP0DMV8 641 aaKnown RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 HSPA1BP0DMV9 641 aaKnown RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 ITPKAP23677 461 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 PRKAR2BP31323 418 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 APOBRQ0VD83 1088 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 CAMK2GQ13555 558 aaPredicted RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 LAMC2Q13753 1193 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 TCEAL1Q15170 157 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 LONRF2Q1L5Z9 754 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 SNAP47Q5SQN1 464 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 TRIM65Q6PJ69 517 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 EP400NLQ6ZTU2 488 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 HDXQ7Z353 690 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 TRIM46Q7Z4K8 759 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 ERC1Q8IUD2 1116 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 GOLM1Q8NBJ4 401 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 NLGN2Q8NFZ4 835 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 BICD2Q8TD16 824 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 UTP14AQ9BVJ6 771 aaKnown RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 PARD6BQ9BYG5 372 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 TRIM55Q9BYV6 548 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 SIRPGQ9P1W8 387 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 VPS18Q9P253 973 aa6.72□□□□□ -1.33
CASC19-260ENST00000641828 CPSF1Q10570 1443 aaKnown RBP6.72□□□□□ -1.33
CASC19-260ENST00000641828 MYH15Q9Y2K3 1946 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 GOLGA6L9A6NEM1 432 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 H3BQF6 201 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 ENC1O14682 589 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 ZSCAN12O43309 604 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 TRPA1O75762 1119 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 TOMM70O94826 608 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 LMNB2Q03252 620 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 PLAURQ03405 335 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 TNP2Q05952 138 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 GRIN2CQ14957 1233 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.71□□□□□ -1.33
CASC19-260ENST00000641828 TTBK2Q6IQ55 1244 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 NBPF11Q86T75 865 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 FCHSD1Q86WN1 690 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 DHX40Q8IX18 779 aaKnown RBP6.71□□□□□ -1.33
CASC19-260ENST00000641828 CPLX3Q8WVH0 158 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 ZFP42Q96MM3 310 aa6.71□□□□□ -1.33
CASC19-260ENST00000641828 MEIS3Q99687 375 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms