RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 TNFRSF25Q93038 417 aa12.23□□□□□ -0.45
KCNMA1-225ENST00000626620 PHF20Q9BVI0 1012 aa12.23□□□□□ -0.45
KCNMA1-225ENST00000626620 SPATC1LQ9H0A9 340 aa12.23□□□□□ -0.45
KCNMA1-225ENST00000626620 RAVER2Q9HCJ3 691 aaKnown RBP12.23□□□□□ -0.45
KCNMA1-225ENST00000626620 VAT1LQ9HCJ6 419 aa12.23□□□□□ -0.45
KCNMA1-225ENST00000626620 GCLCP48506 637 aaPredicted RBP12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 ERVK-24P63145 666 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 MUM1L1Q5H9M0 696 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 RRP36Q96EU6 259 aaKnown RBP12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 MOV10L1Q9BXT6 1211 aaKnown RBP12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 SH3GLB2Q9NR46 395 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 NAP1L2Q9ULW6 460 aaPredicted RBP12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 MYH7BA7E2Y1 1941 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 GJB2P29033 226 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 MLLT1Q03111 559 aaPredicted RBP12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 FAM110CQ1W6H9 321 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 GPKOWQ92917 476 aaPredicted RBP eCLIP12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 COA7Q96BR5 231 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 CDKL5O76039 1030 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 IRX3P78415 501 aaPredicted RBP12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 FAM177A1Q8N128 213 aaPredicted RBP12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 ZMYND12Q9H0C1 365 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 PORCNQ9H237 461 aa12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 ORC3Q9UBD5 711 aaPredicted RBP12.22□□□□□ -0.45
KCNMA1-225ENST00000626620 ESYT2A0FGR8 921 aa12.21□□□□□ -0.45
KCNMA1-225ENST00000626620 MEIS2O14770 477 aa12.21□□□□□ -0.45
KCNMA1-225ENST00000626620 SHCBP1Q8NEM2 672 aa12.21□□□□□ -0.45
KCNMA1-225ENST00000626620 FGD4Q96M96 766 aa12.21□□□□□ -0.45
KCNMA1-225ENST00000626620 CCDC85CA6NKD9 419 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 hCG_1984214I3L0E3 225 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 ASTN1O14525 1302 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 CCDC174Q6PII3 467 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 FBXO46Q6PJ61 603 aaPredicted RBP12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 ZNF713Q8N859 430 aaPredicted RBP12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 DDX11Q96FC9 970 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 RBM27Q9P2N5 1060 aaKnown RBP12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 HSD17B4P51659 736 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 HMGN5P82970 282 aaKnown RBP12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 PPP1R18Q6NYC8 613 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 FBXO11Q86XK2 927 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 DAGLBQ8NCG7 672 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 TBC1D5Q92609 795 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 USP6NLQ92738 828 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 AMNQ9BXJ7 453 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 TEX13BQ9BXU2 312 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 MAF1Q9H063 256 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 ZDHHC9Q9Y397 364 aa12.21□□□□□ -0.46
KCNMA1-225ENST00000626620 FRMPD4Q14CM0 1322 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 DNAJC25-GNG10A0A024R161 153 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 PIK3CDO00329 1044 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 ZBED4O75132 1171 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 TAF1CQ15572 869 aaPredicted RBP12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 ANKRD13CQ8N6S4 541 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 CRYGNQ8WXF5 182 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 ABCB11O95342 1321 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 NFIBO00712 420 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 FKTNO75072 461 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 STAT3P40763 770 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 HOMER1Q86YM7 354 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 VPS54Q9P1Q0 977 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 CPA4Q9UI42 421 aa12.2□□□□□ -0.46
KCNMA1-225ENST00000626620 CPLX1O14810 134 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 TKFCQ3LXA3 575 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 FBXO18Q8NFZ0 1043 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 PIBF1Q8WXW3 757 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 COL20A1Q9P218 1284 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 DAXXQ9UER7 740 aaPredicted RBP12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 PCDHA1Q9Y5I3 950 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 SNRNP48Q6IEG0 339 aaKnown RBP12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 GPRC5AQ8NFJ5 357 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 ZFYVE28Q9HCC9 887 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 RIC8AQ9NPQ8 531 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 ARMC5Q96C12 935 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 ALG1Q9BT22 464 aa12.19□□□□□ -0.46
KCNMA1-225ENST00000626620 PKP1Q13835 747 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 MORN1Q5T089 497 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 OTUD7BQ6GQQ9 843 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 OTOP1Q7RTM1 612 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 GJD2Q9UKL4 321 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 CCPG1Q9ULG6 757 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 KIAA1217Q5T5P2 1943 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 MMP1P03956 469 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 ERCC3P19447 782 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 EARS2Q5JPH6 523 aaKnown RBP12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 TEX2Q8IWB9 1127 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 TRERF1Q96PN7 1200 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 RPTORQ8N122 1335 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 SLC25A27O95847 323 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 SYT1P21579 422 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 IKQ13123 557 aaPredicted RBP12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 USH1GQ495M9 461 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 CPLX2Q6PUV4 134 aaKnown RBP12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 TRIM22Q8IYM9 498 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 CHST13Q8NET6 341 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 OXER1Q8TDS5 423 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 EFCC1Q9HA90 598 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 KCNJ14Q9UNX9 436 aa12.18□□□□□ -0.46
KCNMA1-225ENST00000626620 MTMR6Q9Y217 621 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms