RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 CAVIN1Q6NZI2 390 aaKnown RBP10□□□□□ -0.81
GTF2I-219ENST00000621040 RASGRP2Q7LDG7 609 aa10□□□□□ -0.81
GTF2I-219ENST00000621040 ZNF467Q7Z7K2 595 aaPredicted RBP10□□□□□ -0.81
GTF2I-219ENST00000621040 PRPF38AQ8NAV1 312 aaKnown RBP10□□□□□ -0.81
GTF2I-219ENST00000621040 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
GTF2I-219ENST00000621040 FBXO28Q9NVF7 368 aa10□□□□□ -0.81
GTF2I-219ENST00000621040 LOC102724159A0A0B4J2E5 919 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 BMP3P12645 472 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 PWP2Q15269 919 aaKnown RBP9.99□□□□□ -0.81
GTF2I-219ENST00000621040 SLFN13Q68D06 897 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 PLEKHH3Q7Z736 793 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 EGFL6Q8IUX8 553 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 APBA2Q99767 749 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 DDX41Q9UJV9 622 aaKnown RBP9.99□□□□□ -0.81
GTF2I-219ENST00000621040 DDX49Q9Y6V7 483 aaKnown RBP9.99□□□□□ -0.81
GTF2I-219ENST00000621040 TSPY2A6NKD2 308 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 STRNO43815 780 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 PRR29P0C7W0 189 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 MCCP23508 829 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 HOXD10P28358 340 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 HAND2P61296 217 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 KIF22Q14807 665 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 TKFCQ3LXA3 575 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 CREB3L3Q68CJ9 461 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 MAMDC4Q6UXC1 1216 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 LRRC47Q8N1G4 583 aaKnown RBP9.99□□□□□ -0.81
GTF2I-219ENST00000621040 SMCR8Q8TEV9 937 aaPredicted RBP9.99□□□□□ -0.81
GTF2I-219ENST00000621040 KATNBL1Q9H079 304 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 LY9Q9HBG7 655 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 NRBP1Q9UHY1 535 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 WDR81Q562E7 1941 aa9.99□□□□□ -0.81
GTF2I-219ENST00000621040 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
GTF2I-219ENST00000621040 EVCP57679 992 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 MAP2K5Q13163 448 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 SGMS1Q86VZ5 419 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 MSL3Q8N5Y2 521 aaKnown RBP9.98□□□□□ -0.81
GTF2I-219ENST00000621040 TRIB2Q92519 343 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 NUP88Q99567 741 aaPredicted RBP9.98□□□□□ -0.81
GTF2I-219ENST00000621040 FLRT1Q9NZU1 646 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 B4E1Z4 1266 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 PRPF40AO75400 957 aaKnown RBP9.98□□□□□ -0.81
GTF2I-219ENST00000621040 SMARCA1P28370 1054 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 FLT3LGP49771 235 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 TROAPQ12815 778 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 ZYXQ15942 572 aaKnown RBP9.98□□□□□ -0.81
GTF2I-219ENST00000621040 FOXD4L6Q3SYB3 417 aaPredicted RBP9.98□□□□□ -0.81
GTF2I-219ENST00000621040 FOXD4L3Q6VB84 417 aaPredicted RBP9.98□□□□□ -0.81
GTF2I-219ENST00000621040 TMX3Q96JJ7 454 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 MYCBPQ99417 103 aaPredicted RBP9.98□□□□□ -0.81
GTF2I-219ENST00000621040 NCAPGQ9BPX3 1015 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 MAD2L2Q9UI95 211 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 TNKSO95271 1327 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 FRMPD4Q14CM0 1322 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 KDM4AO75164 1064 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 RCAN1P53805 252 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 CUL4AQ13619 759 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 GRM4Q14833 912 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 SPICE1Q8N0Z3 855 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 FAM53CQ9NYF3 392 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 ASTN1O14525 1302 aa9.98□□□□□ -0.81
GTF2I-219ENST00000621040 SH2B2O14492 632 aaPredicted RBP9.97□□□□□ -0.81
GTF2I-219ENST00000621040 LIFRP42702 1097 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 STAT2P52630 851 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 CCNA1P78396 465 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 FOXD4L5Q5VV16 416 aaPredicted RBP9.97□□□□□ -0.81
GTF2I-219ENST00000621040 FOXD4L4Q8WXT5 416 aaPredicted RBP9.97□□□□□ -0.81
GTF2I-219ENST00000621040 ZBTB9Q96C00 473 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 PRR12Q9ULL5 1215 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 COBLO75128 1261 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 FLOT1O75955 427 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 NPLOC4Q8TAT6 608 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 CLEC4DQ8WXI8 215 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 RIPK3Q9Y572 518 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 DTNBO60941 627 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 BRD1O95696 1058 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 ICAM1P05362 532 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 CYBAP13498 195 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 GRK4P32298 578 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 ASPRV1Q53RT3 343 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 GPATCH4Q5T3I0 446 aaKnown RBP9.97□□□□□ -0.81
GTF2I-219ENST00000621040 CHST13Q8NET6 341 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 TEX13BQ9BXU2 312 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 ALDH8A1Q9H2A2 487 aaPredicted RBP9.97□□□□□ -0.81
GTF2I-219ENST00000621040 RIOX1Q9H6W3 641 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 SENP2Q9HC62 589 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 BRMS1Q9HCU9 246 aa9.97□□□□□ -0.81
GTF2I-219ENST00000621040 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.97□□□□□ -0.81
GTF2I-219ENST00000621040 TANC1Q9C0D5 1861 aa9.96□□□□□ -0.81
GTF2I-219ENST00000621040 RANBP6O60518 1105 aaKnown RBP9.96□□□□□ -0.81
GTF2I-219ENST00000621040 HMGCRP04035 888 aa9.96□□□□□ -0.81
GTF2I-219ENST00000621040 ERCC3P19447 782 aa9.96□□□□□ -0.81
GTF2I-219ENST00000621040 RASEFQ8IZ41 740 aa9.96□□□□□ -0.81
GTF2I-219ENST00000621040 NCOA7Q8NI08 942 aa9.96□□□□□ -0.81
GTF2I-219ENST00000621040 COA7Q96BR5 231 aa9.96□□□□□ -0.81
GTF2I-219ENST00000621040 SYNGAP1Q96PV0 1343 aa9.96□□□□□ -0.82
GTF2I-219ENST00000621040 TNPO2O14787 897 aaKnown RBP9.96□□□□□ -0.82
GTF2I-219ENST00000621040 RGS2P41220 211 aa9.96□□□□□ -0.82
GTF2I-219ENST00000621040 NOLC1Q14978 699 aaKnown RBP eCLIP9.96□□□□□ -0.82
GTF2I-219ENST00000621040 NBPF20Q3BBV1 942 aa9.96□□□□□ -0.82
GTF2I-219ENST00000621040 TRPV1Q8NER1 839 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms