RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 TNKSO95271 1327 aa25.88■■□□□ 1.73
SYNGR3-206ENST00000618464 COL6A3P12111 3177 aa25.87■■□□□ 1.73
SYNGR3-206ENST00000618464 LBHD1Q9BQE6 289 aaPredicted RBP25.87■■□□□ 1.73
SYNGR3-206ENST00000618464 UBAC1Q9BSL1 405 aa25.87■■□□□ 1.73
SYNGR3-206ENST00000618464 ABHD16BQ9H3Z7 469 aa25.87■■□□□ 1.73
SYNGR3-206ENST00000618464 SYNRGQ9UMZ2 1314 aa25.87■■□□□ 1.73
SYNGR3-206ENST00000618464 CCDC144BQ3MJ40 725 aa25.86■■□□□ 1.73
SYNGR3-206ENST00000618464 GPATCH4Q5T3I0 446 aaKnown RBP25.86■■□□□ 1.73
SYNGR3-206ENST00000618464 ANKS1AQ92625 1134 aa25.86■■□□□ 1.73
SYNGR3-206ENST00000618464 PURBQ96QR8 312 aaKnown RBP25.86■■□□□ 1.73
SYNGR3-206ENST00000618464 UBA5Q9GZZ9 404 aa25.86■■□□□ 1.73
SYNGR3-206ENST00000618464 NFIBO00712 420 aa25.85■■□□□ 1.73
SYNGR3-206ENST00000618464 SGSM2O43147 1006 aa25.85■■□□□ 1.73
SYNGR3-206ENST00000618464 ADCY6O43306 1168 aa25.85■■□□□ 1.73
SYNGR3-206ENST00000618464 CYB5R4Q7L1T6 521 aa25.85■■□□□ 1.73
SYNGR3-206ENST00000618464 PRKAG2Q9UGJ0 569 aa25.85■■□□□ 1.73
SYNGR3-206ENST00000618464 PHF24Q9UPV7 400 aa25.85■■□□□ 1.73
SYNGR3-206ENST00000618464 ASTN1O14525 1302 aa25.85■■□□□ 1.73
SYNGR3-206ENST00000618464 ADAMTS4O75173 837 aa25.84■■□□□ 1.73
SYNGR3-206ENST00000618464 SNX17Q15036 470 aa25.84■■□□□ 1.73
SYNGR3-206ENST00000618464 TRIM60Q495X7 471 aa25.84■■□□□ 1.73
SYNGR3-206ENST00000618464 SKAP1Q86WV1 359 aa25.84■■□□□ 1.73
SYNGR3-206ENST00000618464 KATNBL1Q9H079 304 aa25.84■■□□□ 1.73
SYNGR3-206ENST00000618464 U3KPZ7 1027 aaPredicted RBP25.84■■□□□ 1.73
SYNGR3-206ENST00000618464 PTPDC1A2A3K4 754 aa25.83■■□□□ 1.73
SYNGR3-206ENST00000618464 MYADML2A6NDP7 307 aa25.83■■□□□ 1.73
SYNGR3-206ENST00000618464 ASB14A6NK59 587 aa25.83■■□□□ 1.73
SYNGR3-206ENST00000618464 DUSP11O75319 330 aaKnown RBP25.83■■□□□ 1.73
SYNGR3-206ENST00000618464 CYP21A2P08686 494 aa25.83■■□□□ 1.73
SYNGR3-206ENST00000618464 IRX5P78411 483 aaPredicted RBP25.83■■□□□ 1.73
SYNGR3-206ENST00000618464 BAATQ14032 418 aaPredicted RBP25.83■■□□□ 1.73
SYNGR3-206ENST00000618464 SLC17A8Q8NDX2 589 aa25.83■■□□□ 1.73
SYNGR3-206ENST00000618464 MTMR10Q9NXD2 777 aa25.83■■□□□ 1.73
SYNGR3-206ENST00000618464 TAF6LQ9Y6J9 622 aa25.83■■□□□ 1.73
SYNGR3-206ENST00000618464 LCTP09848 1927 aa25.82■■□□□ 1.72
SYNGR3-206ENST00000618464 LTBP2Q14767 1821 aa25.82■■□□□ 1.72
SYNGR3-206ENST00000618464 TRDNQ13061 729 aa25.82■■□□□ 1.72
SYNGR3-206ENST00000618464 USH1GQ495M9 461 aa25.82■■□□□ 1.72
SYNGR3-206ENST00000618464 IFIT1BQ5T764 474 aaKnown RBP25.82■■□□□ 1.72
SYNGR3-206ENST00000618464 CLEC4DQ8WXI8 215 aa25.82■■□□□ 1.72
SYNGR3-206ENST00000618464 PRDM5Q9NQX1 630 aaPredicted RBP25.82■■□□□ 1.72
SYNGR3-206ENST00000618464 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.81■■□□□ 1.72
SYNGR3-206ENST00000618464 A0A1W2PQ45 241 aaPredicted RBP25.81■■□□□ 1.72
SYNGR3-206ENST00000618464 A0A1W2PQY0 241 aa25.81■■□□□ 1.72
SYNGR3-206ENST00000618464 C6orf222P0C671 652 aaPredicted RBP25.81■■□□□ 1.72
SYNGR3-206ENST00000618464 ASPRV1Q53RT3 343 aa25.81■■□□□ 1.72
SYNGR3-206ENST00000618464 SLC30A10Q6XR72 485 aa25.81■■□□□ 1.72
SYNGR3-206ENST00000618464 EEPD1Q7L9B9 569 aa25.81■■□□□ 1.72
SYNGR3-206ENST00000618464 PARP1P09874 1014 aaKnown RBP25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 CALML3P27482 149 aa25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 KCNA10Q16322 511 aa25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 CDC37Q16543 378 aaPredicted RBP25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 NOL8Q76FK4 1167 aaKnown RBP25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 SH3RF1Q7Z6J0 888 aa25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 KLHDC9Q8NEP7 349 aa25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 PDLIM7Q9NR12 457 aa25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 PNMA2Q9UL42 364 aa25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 WDR19Q8NEZ3 1342 aa25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 LRRC37A2A6NM11 1700 aa25.8■■□□□ 1.72
SYNGR3-206ENST00000618464 DHX16O60231 1041 aaKnown RBP25.79■■□□□ 1.72
SYNGR3-206ENST00000618464 ACLYP53396 1101 aa25.79■■□□□ 1.72
SYNGR3-206ENST00000618464 TNFAIP2Q03169 654 aa25.79■■□□□ 1.72
SYNGR3-206ENST00000618464 SEC23AQ15436 765 aa25.79■■□□□ 1.72
SYNGR3-206ENST00000618464 C1orf53Q5VUE5 145 aa25.79■■□□□ 1.72
SYNGR3-206ENST00000618464 CENPQQ7L2Z9 268 aaPredicted RBP25.79■■□□□ 1.72
SYNGR3-206ENST00000618464 FBXO16Q8IX29 292 aaPredicted RBP25.79■■□□□ 1.72
SYNGR3-206ENST00000618464 ADGRF4Q8IZF3 695 aa25.79■■□□□ 1.72
SYNGR3-206ENST00000618464 TSEN34Q9BSV6 310 aaKnown RBP25.79■■□□□ 1.72
SYNGR3-206ENST00000618464 SPC25Q9HBM1 224 aa25.79■■□□□ 1.72
SYNGR3-206ENST00000618464 TRIM43BA6NCK2 446 aa25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 E7EWF7 191 aa25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 PTGS1P23219 599 aa25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 TLE2Q04725 743 aa25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 RNF207Q6ZRF8 634 aa25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 RALYLQ86SE5 291 aaKnown RBP25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 BADQ92934 168 aa25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 TRIM43Q96BQ3 446 aaPredicted RBP25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 UPF3AQ9H1J1 476 aaKnown RBP25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 VAT1LQ9HCJ6 419 aa25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 PDGFCQ9NRA1 345 aa25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 ADD3Q9UEY8 706 aaKnown RBP25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 RBM8AQ9Y5S9 174 aaKnown RBP25.78■■□□□ 1.72
SYNGR3-206ENST00000618464 ALDH5A1P51649 535 aaPredicted RBP25.77■■□□□ 1.72
SYNGR3-206ENST00000618464 GJA9P57773 515 aa25.77■■□□□ 1.72
SYNGR3-206ENST00000618464 SHHQ15465 462 aa25.77■■□□□ 1.72
SYNGR3-206ENST00000618464 CCSAPQ6IQ19 270 aaPredicted RBP25.77■■□□□ 1.72
SYNGR3-206ENST00000618464 STOX1Q6ZVD7 989 aa25.77■■□□□ 1.72
SYNGR3-206ENST00000618464 CHST3Q7LGC8 479 aa25.77■■□□□ 1.72
SYNGR3-206ENST00000618464 STAG2Q8N3U4 1231 aa25.77■■□□□ 1.72
SYNGR3-206ENST00000618464 MAP4K1Q92918 833 aa25.77■■□□□ 1.72
SYNGR3-206ENST00000618464 STARD7Q9NQZ5 370 aa25.77■■□□□ 1.72
SYNGR3-206ENST00000618464 STXBP5LQ9Y2K9 1186 aa25.77■■□□□ 1.72
SYNGR3-206ENST00000618464 IFIT3O14879 490 aaKnown RBP25.76■■□□□ 1.71
SYNGR3-206ENST00000618464 PQBP1O60828 265 aaKnown RBP25.76■■□□□ 1.71
SYNGR3-206ENST00000618464 RPS6P62753 249 aaKnown RBP25.76■■□□□ 1.71
SYNGR3-206ENST00000618464 GNASQ5JWF2 1037 aa25.76■■□□□ 1.71
SYNGR3-206ENST00000618464 C9orf50Q5SZB4 431 aa25.76■■□□□ 1.71
SYNGR3-206ENST00000618464 KIAA1211Q6ZU35 1233 aa25.76■■□□□ 1.71
SYNGR3-206ENST00000618464 NCOA7Q8NI08 942 aa25.76■■□□□ 1.71
SYNGR3-206ENST00000618464 NUP133Q8WUM0 1156 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms