RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CNOT6LQ96LI5 555 aaKnown RBP16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 LRRC1Q9BTT6 524 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 KBTBD4Q9NVX7 518 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 GOLGA6AQ9NYA3 693 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 DNAJC21Q5F1R6 531 aaKnown RBP16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 MIIPQ5JXC2 388 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 SND1Q7KZF4 910 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 PSMB7Q99436 277 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 MLXIPQ9HAP2 919 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 UBA7P41226 1012 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 VAV2P52735 878 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 SLC7A5Q01650 507 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 KIF5AQ12840 1032 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 INF2Q27J81 1249 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 RCSD1Q6JBY9 416 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 CCDC170Q8IYT3 715 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 STAG2Q8N3U4 1231 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 EHD2Q9NZN4 543 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 SNX12Q9UMY4 172 aa16.88■□□□□ 0.29
PCDHGB1-202ENST00000611598 NUTM2BA6NNL0 878 aaPredicted RBP16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 NUTM2EB1AL46 878 aaPredicted RBP16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 MATR3P43243 847 aaKnown RBP eCLIP16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 CCT5P48643 541 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 STK4Q13043 487 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 CCDC96Q2M329 555 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 PPM1EQ8WY54 764 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 HPS3Q969F9 1004 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 FAM184BQ9ULE4 1060 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 PCDHA4Q9UN74 947 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 EPHB6O15197 1021 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 FCER1AP12319 257 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 CXCR5P32302 372 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 MTIF2P46199 727 aaKnown RBP16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 IRAK1P51617 712 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 CCDC178Q5BJE1 867 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 P2RX5Q93086 422 aa16.87■□□□□ 0.29
PCDHGB1-202ENST00000611598 ORC4O43929 436 aa16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 MOCS3O95396 460 aa16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 CALML3P27482 149 aa16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 TTC19Q6DKK2 380 aaPredicted RBP16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 NOC4LQ9BVI4 516 aaKnown RBP16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 NUP58Q9BVL2 599 aa16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 DCP1AQ9NPI6 582 aaPredicted RBP16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 CCDC194A0A1B0GVG4 234 aa16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 TSPY2A6NKD2 308 aa16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 M0R2N6 131 aa16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 PLCG1P19174 1290 aa16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 NFRKBQ6P4R8 1299 aa16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 CCDC42Q96M95 316 aa16.86■□□□□ 0.29
PCDHGB1-202ENST00000611598 EXOC5O00471 708 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 NTSR2O95665 410 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 PCP11498 1178 aaKnown RBP16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 CCNE1P24864 410 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 PDE4DQ08499 809 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 SLC35G1Q2M3R5 365 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 FKBP15Q5T1M5 1219 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 ICE2Q659A1 982 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 FNBP4Q8N3X1 1017 aaPredicted RBP16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 RETREG2Q8NC44 543 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 DHTKD1Q96HY7 919 aaPredicted RBP16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 ARHGAP20Q9P2F6 1191 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 PCDHA6Q9UN73 950 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 PCDHA8Q9Y5H6 950 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 C3orf67Q6ZVT6 689 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 EFCAB13Q8IY85 973 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 MMGT1Q8N4V1 131 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 TSEN2Q8NCE0 465 aaKnown RBP16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 SPATA4Q8NEY3 305 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 NOC3LQ8WTT2 800 aaKnown RBP16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 IFIH1Q9BYX4 1025 aaKnown RBP16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 CCSER1Q9C0I3 900 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 SH2D4AQ9H788 454 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 MTMR7Q9Y216 660 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 NIP7Q9Y221 180 aaKnown RBP eCLIP16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 JRKLQ9Y4A0 524 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 A0A1B0GUL6 1792 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 GRIN2DO15399 1336 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 FLT1P17948 1338 aa16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 COL22A1Q8NFW1 1626 aaPredicted RBP16.85■□□□□ 0.29
PCDHGB1-202ENST00000611598 SPA17Q15506 151 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 IQCEQ6IPM2 695 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 INTS5Q6P9B9 1019 aaKnown RBP16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 TADA2BQ86TJ2 420 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 TRIM9Q9C026 710 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 NCK2O43639 380 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 KLRK1P26718 216 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 MECOMQ03112 1051 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 C2CD5Q86YS7 1000 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 TRIM58Q8NG06 486 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 NSUN4Q96CB9 384 aaKnown RBP16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 ERGIC2Q96RQ1 377 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 FAM207AQ9NSI2 230 aaPredicted RBP16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 PCDHA13Q9Y5I0 950 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 MYH10P35580 1976 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 CAMTA2O94983 1202 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 KIF5BP33176 963 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 ASIC1P78348 528 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 TXNRD1Q16881 649 aa16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 ZSCAN29Q8IWY8 852 aaPredicted RBP16.84■□□□□ 0.29
PCDHGB1-202ENST00000611598 AMOTL1Q8IY63 956 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms