RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 SNAI1O95863 264 aaPredicted RBP16.92■□□□□ 0.3
HDDC2-204ENST00000608295 PGK1P00558 417 aa16.92■□□□□ 0.3
HDDC2-204ENST00000608295 PTGS1P23219 599 aa16.92■□□□□ 0.3
HDDC2-204ENST00000608295 CALML3P27482 149 aa16.92■□□□□ 0.3
HDDC2-204ENST00000608295 TKFCQ3LXA3 575 aa16.92■□□□□ 0.3
HDDC2-204ENST00000608295 HOMER1Q86YM7 354 aa16.92■□□□□ 0.3
HDDC2-204ENST00000608295 CCDC144CPQ8IYA2 1237 aa16.92■□□□□ 0.3
HDDC2-204ENST00000608295 ADGRF4Q8IZF3 695 aa16.92■□□□□ 0.3
HDDC2-204ENST00000608295 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
HDDC2-204ENST00000608295 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.92■□□□□ 0.3
HDDC2-204ENST00000608295 CYP39A1Q9NYL5 469 aa16.92■□□□□ 0.3
HDDC2-204ENST00000608295 ZMYND8Q9ULU4 1186 aaPredicted RBP16.92■□□□□ 0.3
HDDC2-204ENST00000608295 MSCO60682 206 aa16.91■□□□□ 0.3
HDDC2-204ENST00000608295 ZNF865P0CJ78 1059 aaPredicted RBP16.91■□□□□ 0.3
HDDC2-204ENST00000608295 RARBP10826 455 aa16.91■□□□□ 0.3
HDDC2-204ENST00000608295 SYN1P17600 705 aa16.91■□□□□ 0.3
HDDC2-204ENST00000608295 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
HDDC2-204ENST00000608295 BAATQ14032 418 aaPredicted RBP16.91■□□□□ 0.3
HDDC2-204ENST00000608295 SART3Q15020 963 aaKnown RBP16.91■□□□□ 0.3
HDDC2-204ENST00000608295 QRICH1Q2TAL8 776 aa16.91■□□□□ 0.3
HDDC2-204ENST00000608295 FBXO16Q8IX29 292 aaPredicted RBP16.91■□□□□ 0.3
HDDC2-204ENST00000608295 FAM133AQ8N9E0 248 aa16.91■□□□□ 0.3
HDDC2-204ENST00000608295 ANKS1AQ92625 1134 aa16.91■□□□□ 0.3
HDDC2-204ENST00000608295 FERMT2Q96AC1 680 aa16.91■□□□□ 0.3
HDDC2-204ENST00000608295 TCEANC2Q96MN5 208 aa16.91■□□□□ 0.3
HDDC2-204ENST00000608295 SENP6Q9GZR1 1112 aaPredicted RBP16.91■□□□□ 0.3
HDDC2-204ENST00000608295 XPNPEP3Q9NQH7 507 aa16.91■□□□□ 0.3
HDDC2-204ENST00000608295 DIS3Q9Y2L1 958 aaKnown RBP16.91■□□□□ 0.3
HDDC2-204ENST00000608295 KBTBD13C9JR72 458 aa16.9■□□□□ 0.3
HDDC2-204ENST00000608295 AKR1A1P14550 325 aa16.9■□□□□ 0.3
HDDC2-204ENST00000608295 RXRAP19793 462 aa16.9■□□□□ 0.3
HDDC2-204ENST00000608295 NFXL1Q6ZNB6 911 aa16.9■□□□□ 0.3
HDDC2-204ENST00000608295 SYNGAP1Q96PV0 1343 aa16.9■□□□□ 0.3
HDDC2-204ENST00000608295 KLRF2D3W0D1 207 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 ADCY6O43306 1168 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 NT5C2P49902 561 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 ACVR2BQ13705 512 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 LRRC41Q15345 812 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 LRRC26Q2I0M4 334 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.89■□□□□ 0.29
HDDC2-204ENST00000608295 CLEC4DQ8WXI8 215 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 JMJD4Q9H9V9 463 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 PPP4R2Q9NY27 417 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 MAD2L2Q9UI95 211 aa16.89■□□□□ 0.29
HDDC2-204ENST00000608295 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.88■□□□□ 0.29
HDDC2-204ENST00000608295 MYADML2A6NDP7 307 aa16.88■□□□□ 0.29
HDDC2-204ENST00000608295 DNM1LO00429 736 aa16.88■□□□□ 0.29
HDDC2-204ENST00000608295 GRM4Q14833 912 aa16.88■□□□□ 0.29
HDDC2-204ENST00000608295 CCDC144BQ3MJ40 725 aa16.88■□□□□ 0.29
HDDC2-204ENST00000608295 RNF207Q6ZRF8 634 aa16.88■□□□□ 0.29
HDDC2-204ENST00000608295 NOL8Q76FK4 1167 aaKnown RBP16.88■□□□□ 0.29
HDDC2-204ENST00000608295 CATIPQ7Z7H3 387 aa16.88■□□□□ 0.29
HDDC2-204ENST00000608295 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
HDDC2-204ENST00000608295 LY9Q9HBG7 655 aa16.88■□□□□ 0.29
HDDC2-204ENST00000608295 WDR19Q8NEZ3 1342 aa16.88■□□□□ 0.29
HDDC2-204ENST00000608295 SYNRGQ9UMZ2 1314 aa16.88■□□□□ 0.29
HDDC2-204ENST00000608295 COL6A1P12109 1028 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 MCM5P33992 734 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 ADCYAP1R1P41586 468 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 ALDH5A1P51649 535 aaPredicted RBP16.87■□□□□ 0.29
HDDC2-204ENST00000608295 NECTIN1Q15223 517 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 SLC35G1Q2M3R5 365 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 MAMDC4Q6UXC1 1216 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 ZNF654Q8IZM8 581 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 ARRDC4Q8NCT1 418 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 TBC1D5Q92609 795 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 FAM184BQ9ULE4 1060 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 ATP11BQ9Y2G3 1177 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 NR2E3Q9Y5X4 410 aa16.87■□□□□ 0.29
HDDC2-204ENST00000608295 CCDC69A6NI79 296 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 SH2B2O14492 632 aaPredicted RBP16.86■□□□□ 0.29
HDDC2-204ENST00000608295 PPP1R11O60927 126 aaPredicted RBP16.86■□□□□ 0.29
HDDC2-204ENST00000608295 CPA1P15085 419 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 RPS6P62753 249 aaKnown RBP16.86■□□□□ 0.29
HDDC2-204ENST00000608295 ADCK5Q3MIX3 580 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 TMEM63BQ5T3F8 832 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 RNF20Q5VTR2 975 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 FBXO11Q86XK2 927 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 CMTR1Q8N1G2 835 aaKnown RBP16.86■□□□□ 0.29
HDDC2-204ENST00000608295 MSL3Q8N5Y2 521 aaKnown RBP16.86■□□□□ 0.29
HDDC2-204ENST00000608295 IGDCC4Q8TDY8 1250 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 PIGSQ96S52 555 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 ABHD16BQ9H3Z7 469 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 PDGFCQ9NRA1 345 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 NRBP1Q9UHY1 535 aa16.86■□□□□ 0.29
HDDC2-204ENST00000608295 COLQQ9Y215 455 aaPredicted RBP16.86■□□□□ 0.29
HDDC2-204ENST00000608295 PALM3A6NDB9 673 aaPredicted RBP16.85■□□□□ 0.29
HDDC2-204ENST00000608295 ASB14A6NK59 587 aa16.85■□□□□ 0.29
HDDC2-204ENST00000608295 C6orf222P0C671 652 aaPredicted RBP16.85■□□□□ 0.29
HDDC2-204ENST00000608295 MICU3Q86XE3 530 aa16.85■□□□□ 0.29
HDDC2-204ENST00000608295 CTCFLQ8NI51 663 aaPredicted RBP16.85■□□□□ 0.29
HDDC2-204ENST00000608295 KATNBL1Q9H079 304 aa16.85■□□□□ 0.29
HDDC2-204ENST00000608295 ABCB11O95342 1321 aa16.85■□□□□ 0.29
HDDC2-204ENST00000608295 CYTH3O43739 400 aa16.84■□□□□ 0.29
HDDC2-204ENST00000608295 ADAMTS4O75173 837 aa16.84■□□□□ 0.29
HDDC2-204ENST00000608295 PLEKHA8P1O95397 391 aa16.84■□□□□ 0.29
HDDC2-204ENST00000608295 CFBP00751 764 aa16.84■□□□□ 0.29
HDDC2-204ENST00000608295 RTP1P59025 263 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms