RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 CREB3L3Q68CJ9 461 aa18.43■□□□□ 0.54
ZNF550-207ENST00000595560 CCDC144CPQ8IYA2 1237 aa18.43■□□□□ 0.54
ZNF550-207ENST00000595560 CLEC4DQ8WXI8 215 aa18.43■□□□□ 0.54
ZNF550-207ENST00000595560 MTA3Q9BTC8 594 aa18.43■□□□□ 0.54
ZNF550-207ENST00000595560 ABHD16BQ9H3Z7 469 aa18.43■□□□□ 0.54
ZNF550-207ENST00000595560 ASTN1O14525 1302 aa18.43■□□□□ 0.54
ZNF550-207ENST00000595560 ASB14A6NK59 587 aa18.42■□□□□ 0.54
ZNF550-207ENST00000595560 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
ZNF550-207ENST00000595560 ACVR2BQ13705 512 aa18.42■□□□□ 0.54
ZNF550-207ENST00000595560 TMEM67Q5HYA8 995 aa18.42■□□□□ 0.54
ZNF550-207ENST00000595560 CHST3Q7LGC8 479 aa18.42■□□□□ 0.54
ZNF550-207ENST00000595560 IGDCC4Q8TDY8 1250 aa18.42■□□□□ 0.54
ZNF550-207ENST00000595560 XPNPEP3Q9NQH7 507 aa18.42■□□□□ 0.54
ZNF550-207ENST00000595560 MAD2L2Q9UI95 211 aa18.42■□□□□ 0.54
ZNF550-207ENST00000595560 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
ZNF550-207ENST00000595560 FAM184BQ9ULE4 1060 aa18.42■□□□□ 0.54
ZNF550-207ENST00000595560 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
ZNF550-207ENST00000595560 KBTBD13C9JR72 458 aa18.41■□□□□ 0.54
ZNF550-207ENST00000595560 KLRF2D3W0D1 207 aa18.41■□□□□ 0.54
ZNF550-207ENST00000595560 GRM4Q14833 912 aa18.41■□□□□ 0.54
ZNF550-207ENST00000595560 LRRC41Q15345 812 aa18.41■□□□□ 0.54
ZNF550-207ENST00000595560 GJC2Q5T442 439 aaPredicted RBP18.41■□□□□ 0.54
ZNF550-207ENST00000595560 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
ZNF550-207ENST00000595560 MAF1Q9H063 256 aa18.41■□□□□ 0.54
ZNF550-207ENST00000595560 KATNBL1Q9H079 304 aa18.41■□□□□ 0.54
ZNF550-207ENST00000595560 JMJD4Q9H9V9 463 aa18.41■□□□□ 0.54
ZNF550-207ENST00000595560 SENP2Q9HC62 589 aa18.41■□□□□ 0.54
ZNF550-207ENST00000595560 LOC102724159A0A0B4J2E5 919 aa18.4■□□□□ 0.54
ZNF550-207ENST00000595560 DHX16O60231 1041 aaKnown RBP18.4■□□□□ 0.54
ZNF550-207ENST00000595560 MCM5P33992 734 aa18.4■□□□□ 0.54
ZNF550-207ENST00000595560 TROAPQ12815 778 aa18.4■□□□□ 0.54
ZNF550-207ENST00000595560 BAATQ14032 418 aaPredicted RBP18.4■□□□□ 0.54
ZNF550-207ENST00000595560 PWP2Q15269 919 aaKnown RBP18.4■□□□□ 0.54
ZNF550-207ENST00000595560 QRICH1Q2TAL8 776 aa18.4■□□□□ 0.54
ZNF550-207ENST00000595560 USH1GQ495M9 461 aa18.4■□□□□ 0.54
ZNF550-207ENST00000595560 RNF20Q5VTR2 975 aa18.4■□□□□ 0.54
ZNF550-207ENST00000595560 SLC30A10Q6XR72 485 aa18.4■□□□□ 0.54
ZNF550-207ENST00000595560 MORC4Q8TE76 937 aa18.4■□□□□ 0.54
ZNF550-207ENST00000595560 SENP6Q9GZR1 1112 aaPredicted RBP18.4■□□□□ 0.54
ZNF550-207ENST00000595560 LY9Q9HBG7 655 aa18.4■□□□□ 0.54
ZNF550-207ENST00000595560 ADD3Q9UEY8 706 aaKnown RBP18.4■□□□□ 0.54
ZNF550-207ENST00000595560 ABCB11O95342 1321 aa18.4■□□□□ 0.54
ZNF550-207ENST00000595560 PTPDC1A2A3K4 754 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 PRC1O43663 620 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 DUSP11O75319 330 aaKnown RBP18.39■□□□□ 0.53
ZNF550-207ENST00000595560 LRRC26Q2I0M4 334 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 CCDC144BQ3MJ40 725 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 RNF207Q6ZRF8 634 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 CATIPQ7Z7H3 387 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 RNF180Q86T96 592 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 C7orf61Q8IZ16 206 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 RGS22Q8NE09 1264 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 LENG1Q96BZ8 264 aaPredicted RBP18.39■□□□□ 0.53
ZNF550-207ENST00000595560 MTMR8Q96EF0 704 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 TMEM87BQ96K49 555 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 PPP4R2Q9NY27 417 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 BAZ2BQ9UIF8 2168 aaKnown RBP18.39■□□□□ 0.53
ZNF550-207ENST00000595560 SYNRGQ9UMZ2 1314 aa18.39■□□□□ 0.53
ZNF550-207ENST00000595560 ADAMTS4O75173 837 aa18.38■□□□□ 0.53
ZNF550-207ENST00000595560 PGK1P00558 417 aa18.38■□□□□ 0.53
ZNF550-207ENST00000595560 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
ZNF550-207ENST00000595560 RPS6P62753 249 aaKnown RBP18.38■□□□□ 0.53
ZNF550-207ENST00000595560 FBXO11Q86XK2 927 aa18.38■□□□□ 0.53
ZNF550-207ENST00000595560 PURBQ96QR8 312 aaKnown RBP18.38■□□□□ 0.53
ZNF550-207ENST00000595560 MAP3K14Q99558 947 aa18.38■□□□□ 0.53
ZNF550-207ENST00000595560 SH2B2O14492 632 aaPredicted RBP18.37■□□□□ 0.53
ZNF550-207ENST00000595560 ADCY6O43306 1168 aa18.37■□□□□ 0.53
ZNF550-207ENST00000595560 DDAH1O94760 285 aa18.37■□□□□ 0.53
ZNF550-207ENST00000595560 CALML3P27482 149 aa18.37■□□□□ 0.53
ZNF550-207ENST00000595560 ALDH5A1P51649 535 aaPredicted RBP18.37■□□□□ 0.53
ZNF550-207ENST00000595560 COL9A3Q14050 684 aaPredicted RBP18.37■□□□□ 0.53
ZNF550-207ENST00000595560 TSGA10IPQ3SY00 556 aa18.37■□□□□ 0.53
ZNF550-207ENST00000595560 ZNF654Q8IZM8 581 aa18.37■□□□□ 0.53
ZNF550-207ENST00000595560 TMTC2Q8N394 836 aa18.37■□□□□ 0.53
ZNF550-207ENST00000595560 DNERQ8NFT8 737 aa18.37■□□□□ 0.53
ZNF550-207ENST00000595560 RIOX1Q9H6W3 641 aa18.37■□□□□ 0.53
ZNF550-207ENST00000595560 VAT1LQ9HCJ6 419 aa18.37■□□□□ 0.53
ZNF550-207ENST00000595560 PHF24Q9UPV7 400 aa18.37■□□□□ 0.53
ZNF550-207ENST00000595560 RANBP2P49792 3224 aaKnown RBP18.37■□□□□ 0.53
ZNF550-207ENST00000595560 ZBTB5O15062 677 aa18.36■□□□□ 0.53
ZNF550-207ENST00000595560 LIFRP42702 1097 aa18.36■□□□□ 0.53
ZNF550-207ENST00000595560 SLC35G1Q2M3R5 365 aa18.36■□□□□ 0.53
ZNF550-207ENST00000595560 AMNQ9BXJ7 453 aa18.36■□□□□ 0.53
ZNF550-207ENST00000595560 UPF3AQ9H1J1 476 aaKnown RBP18.36■□□□□ 0.53
ZNF550-207ENST00000595560 VTA1Q9NP79 307 aa18.36■□□□□ 0.53
ZNF550-207ENST00000595560 GPHNQ9NQX3 736 aaPredicted RBP18.36■□□□□ 0.53
ZNF550-207ENST00000595560 MRPL11Q9Y3B7 192 aaKnown RBP18.36■□□□□ 0.53
ZNF550-207ENST00000595560 DDX49Q9Y6V7 483 aaKnown RBP18.36■□□□□ 0.53
ZNF550-207ENST00000595560 CST5P28325 142 aaPredicted RBP18.35■□□□□ 0.53
ZNF550-207ENST00000595560 ADCYAP1R1P41586 468 aa18.35■□□□□ 0.53
ZNF550-207ENST00000595560 ATN1P54259 1190 aaPredicted RBP18.35■□□□□ 0.53
ZNF550-207ENST00000595560 SNX17Q15036 470 aa18.35■□□□□ 0.53
ZNF550-207ENST00000595560 MCF2L2Q86YR7 1114 aa18.35■□□□□ 0.53
ZNF550-207ENST00000595560 FBXO16Q8IX29 292 aaPredicted RBP18.35■□□□□ 0.53
ZNF550-207ENST00000595560 KLHDC9Q8NEP7 349 aa18.35■□□□□ 0.53
ZNF550-207ENST00000595560 MPHOSPH6Q99547 160 aaKnown RBP18.35■□□□□ 0.53
ZNF550-207ENST00000595560 TSEN34Q9BSV6 310 aaKnown RBP18.35■□□□□ 0.53
ZNF550-207ENST00000595560 COLQQ9Y215 455 aaPredicted RBP18.35■□□□□ 0.53
ZNF550-207ENST00000595560 TRIOBPQ9H2D6 2365 aa18.35■□□□□ 0.53
ZNF550-207ENST00000595560 CCDC69A6NI79 296 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms