RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 ABCB11O95342 1321 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 CNTNAP5Q8WYK1 1306 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 MYH6P13533 1939 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 OPLAHO14841 1288 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 ADORA2AP29274 412 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 RGS2P41220 211 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 MUM1L1Q5H9M0 696 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 OLFML2BQ68BL8 750 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 ZNF467Q7Z7K2 595 aaPredicted RBP13□□□□□ -0.33
XRCC1-204ENST00000594511 TRMT44Q8IYL2 757 aaKnown RBP13□□□□□ -0.33
XRCC1-204ENST00000594511 FAM133AQ8N9E0 248 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 ARMC5Q96C12 935 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 APBA2Q99767 749 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 MCOLN1Q9GZU1 580 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 VAT1LQ9HCJ6 419 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 A1CFQ9NQ94 594 aaKnown RBP13□□□□□ -0.33
XRCC1-204ENST00000594511 MAP3K20Q9NYL2 800 aaKnown RBP13□□□□□ -0.33
XRCC1-204ENST00000594511 ISY1Q9ULR0 285 aaKnown RBP13□□□□□ -0.33
XRCC1-204ENST00000594511 PTCH2Q9Y6C5 1203 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 IVNS1ABPQ9Y6Y0 642 aa13□□□□□ -0.33
XRCC1-204ENST00000594511 HTTP42858 3142 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 PFASO15067 1338 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 LOC102724159A0A0B4J2E5 919 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 PRPF3O43395 683 aaKnown RBP12.99□□□□□ -0.33
XRCC1-204ENST00000594511 ALAS1P13196 640 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 KCTD2Q14681 263 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 PWP2Q15269 919 aaKnown RBP12.99□□□□□ -0.33
XRCC1-204ENST00000594511 ME3Q16798 604 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 MAMDC4Q6UXC1 1216 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 RAB11FIP4Q86YS3 637 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
XRCC1-204ENST00000594511 CCDC144CPQ8IYA2 1237 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 MSL3Q8N5Y2 521 aaKnown RBP12.99□□□□□ -0.33
XRCC1-204ENST00000594511 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 NPLOC4Q8TAT6 608 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 RRP36Q96EU6 259 aaKnown RBP12.99□□□□□ -0.33
XRCC1-204ENST00000594511 FGD4Q96M96 766 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 MMP19Q99542 508 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 CYP39A1Q9NYL5 469 aa12.99□□□□□ -0.33
XRCC1-204ENST00000594511 MRPL11Q9Y3B7 192 aaKnown RBP12.99□□□□□ -0.33
XRCC1-204ENST00000594511 LCTP09848 1927 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 NFIBO00712 420 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 ADCY3O60266 1144 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 GRK4P32298 578 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 HSD17B4P51659 736 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 SCRN1Q12765 414 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 PKN1Q16512 942 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 MAP3K21Q5TCX8 1036 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
XRCC1-204ENST00000594511 MORC4Q8TE76 937 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 RNF26Q9BY78 433 aaPredicted RBP12.98□□□□□ -0.33
XRCC1-204ENST00000594511 RBM27Q9P2N5 1060 aaKnown RBP12.98□□□□□ -0.33
XRCC1-204ENST00000594511 LIMCH1Q9UPQ0 1083 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 PCDHA1Q9Y5I3 950 aa12.98□□□□□ -0.33
XRCC1-204ENST00000594511 PLXNA1Q9UIW2 1896 aa12.97□□□□□ -0.33
XRCC1-204ENST00000594511 hCG_1984214I3L0E3 225 aa12.97□□□□□ -0.33
XRCC1-204ENST00000594511 MCF2L2Q86YR7 1114 aa12.97□□□□□ -0.33
XRCC1-204ENST00000594511 FAM177A1Q8N128 213 aaPredicted RBP12.97□□□□□ -0.33
XRCC1-204ENST00000594511 ZNF713Q8N859 430 aaPredicted RBP12.97□□□□□ -0.33
XRCC1-204ENST00000594511 RAET1EQ8TD07 263 aa12.97□□□□□ -0.33
XRCC1-204ENST00000594511 TRIB2Q92519 343 aa12.97□□□□□ -0.33
XRCC1-204ENST00000594511 MAML3Q96JK9 1138 aa12.97□□□□□ -0.33
XRCC1-204ENST00000594511 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
XRCC1-204ENST00000594511 LARP6Q9BRS8 491 aaKnown RBP12.97□□□□□ -0.33
XRCC1-204ENST00000594511 NCOA5Q9HCD5 579 aaKnown RBP12.97□□□□□ -0.33
XRCC1-204ENST00000594511 SLC5A4Q9NY91 659 aa12.97□□□□□ -0.33
XRCC1-204ENST00000594511 FLRT1Q9NZU1 646 aa12.97□□□□□ -0.33
XRCC1-204ENST00000594511 V9GY48 417 aaPredicted RBP12.97□□□□□ -0.33
XRCC1-204ENST00000594511 ASTN1O14525 1302 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 SOWAHBA6NEL2 793 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 PIK3CDO00329 1044 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.33
XRCC1-204ENST00000594511 LARGE1O95461 756 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 CTDNEP1O95476 244 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 TAL1P17542 331 aaPredicted RBP12.96□□□□□ -0.33
XRCC1-204ENST00000594511 CYP2B6P20813 491 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 RPS6P62753 249 aaKnown RBP12.96□□□□□ -0.33
XRCC1-204ENST00000594511 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.33
XRCC1-204ENST00000594511 ST3GAL1Q11201 340 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 BAATQ14032 418 aaPredicted RBP12.96□□□□□ -0.33
XRCC1-204ENST00000594511 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.33
XRCC1-204ENST00000594511 WDR78Q5VTH9 848 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 DPP9Q86TI2 863 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 ANKRD35Q8N283 1001 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 DNERQ8NFT8 737 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 TBC1D5Q92609 795 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 GTF3C6Q969F1 213 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 ZNF333Q96JL9 665 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 SLKQ9H2G2 1235 aaPredicted RBP12.96□□□□□ -0.33
XRCC1-204ENST00000594511 NRBP1Q9UHY1 535 aa12.96□□□□□ -0.33
XRCC1-204ENST00000594511 SYNGAP1Q96PV0 1343 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 HMGCRP04035 888 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 PGK2P07205 417 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 EDNRBP24530 442 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 MCM2P49736 904 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 CNTN2Q02246 1040 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 CCL14Q16627 93 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 USH1GQ495M9 461 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 PPP1R18Q6NYC8 613 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms