RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 CUL5Q93034 780 aa17.71■□□□□ 0.43
CNN1-210ENST00000592923 GLT8D2Q9H1C3 349 aa17.71■□□□□ 0.43
CNN1-210ENST00000592923 TDRD3Q9H7E2 651 aaKnown RBP17.71■□□□□ 0.43
CNN1-210ENST00000592923 SAMSN1Q9NSI8 373 aaKnown RBP17.71■□□□□ 0.43
CNN1-210ENST00000592923 KBTBD4Q9NVX7 518 aa17.71■□□□□ 0.43
CNN1-210ENST00000592923 COL4A5P29400 1685 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 USP17L10C9JJH3 530 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 TMEM232C9JQI7 657 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 KCNB1Q14721 858 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 ABCB5Q2M3G0 1257 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 SLFN13Q68D06 897 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 KLHL10Q6JEL2 608 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 SMYD4Q8IYR2 804 aaPredicted RBP17.7■□□□□ 0.42
CNN1-210ENST00000592923 IGSF22Q8N9C0 903 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 RWDD2AQ9UIY3 292 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 CTNND2Q9UQB3 1225 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 A0A1B0GTH6 734 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 SLC16A2P36021 539 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 SLC1A4P43007 532 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 SEPT2Q15019 361 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 TPD52L1Q16890 204 aaPredicted RBP17.7■□□□□ 0.42
CNN1-210ENST00000592923 SHROOM1Q2M3G4 852 aaPredicted RBP17.7■□□□□ 0.42
CNN1-210ENST00000592923 MTMR9Q96QG7 549 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 TMOD2Q9NZR1 351 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 SYNPO2Q9UMS6 1093 aa17.7■□□□□ 0.42
CNN1-210ENST00000592923 SPDYE2BA6NHP3 402 aa17.69■□□□□ 0.42
CNN1-210ENST00000592923 SPDYE6P0CI01 402 aa17.69■□□□□ 0.42
CNN1-210ENST00000592923 PLCG1P19174 1290 aa17.69■□□□□ 0.42
CNN1-210ENST00000592923 FXR2P51116 673 aaKnown RBP eCLIP17.69■□□□□ 0.42
CNN1-210ENST00000592923 MRPL12P52815 198 aaKnown RBP17.69■□□□□ 0.42
CNN1-210ENST00000592923 PAK1Q13153 545 aa17.69■□□□□ 0.42
CNN1-210ENST00000592923 CALCRLQ16602 461 aa17.69■□□□□ 0.42
CNN1-210ENST00000592923 CCAR2Q8N163 923 aaKnown RBP17.69■□□□□ 0.42
CNN1-210ENST00000592923 SLC16A10Q8TF71 515 aa17.69■□□□□ 0.42
CNN1-210ENST00000592923 GMCL1Q96IK5 515 aa17.69■□□□□ 0.42
CNN1-210ENST00000592923 PRMT6Q96LA8 375 aaPredicted RBP17.69■□□□□ 0.42
CNN1-210ENST00000592923 C16orf45Q96MC5 204 aaPredicted RBP17.69■□□□□ 0.42
CNN1-210ENST00000592923 PDGFDQ9GZP0 370 aaPredicted RBP17.69■□□□□ 0.42
CNN1-210ENST00000592923 VPS33BQ9H267 617 aa17.69■□□□□ 0.42
CNN1-210ENST00000592923 VIL1P09327 827 aaKnown RBP17.68■□□□□ 0.42
CNN1-210ENST00000592923 TBX2Q13207 712 aaPredicted RBP17.68■□□□□ 0.42
CNN1-210ENST00000592923 SF3B2Q13435 895 aaKnown RBP17.68■□□□□ 0.42
CNN1-210ENST00000592923 HSP90AA4PQ58FG1 418 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 SPECC1LQ69YQ0 1117 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 PPP4R3AQ6IN85 833 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 APTXQ7Z2E3 356 aaKnown RBP17.68■□□□□ 0.42
CNN1-210ENST00000592923 SIAH1Q8IUQ4 282 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 CTAGE1Q96RT6 745 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 GMLQ99445 158 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 HERC5Q9UII4 1024 aaKnown RBP17.68■□□□□ 0.42
CNN1-210ENST00000592923 MYH7BA7E2Y1 1941 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 GDF11O95390 407 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 GTF2F1P35269 517 aaKnown RBP eCLIP17.68■□□□□ 0.42
CNN1-210ENST00000592923 TNNI2P48788 182 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 STX17P56962 302 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 TMEM266Q2M3C6 531 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 QRICH1Q2TAL8 776 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 LRRC15Q8TF66 581 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 CSRNP1Q96S65 589 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 NAP1L4Q99733 375 aaKnown RBP17.68■□□□□ 0.42
CNN1-210ENST00000592923 HDAC9Q9UKV0 1011 aa17.68■□□□□ 0.42
CNN1-210ENST00000592923 USP27XA6NNY8 438 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 DYNC1I1O14576 645 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 SLC37A4O43826 429 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 EDIL3O43854 480 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 KLRC4O43908 158 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 RHOBTB3O94955 611 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 TDP2O95551 362 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 GCFC2P16383 781 aaKnown RBP17.67■□□□□ 0.42
CNN1-210ENST00000592923 NR1I3Q14994 352 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 CDC37Q16543 378 aaPredicted RBP17.67■□□□□ 0.42
CNN1-210ENST00000592923 UBE2SQ16763 222 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 RBM26Q5T8P6 1007 aaKnown RBP17.67■□□□□ 0.42
CNN1-210ENST00000592923 NYAP1Q6ZVC0 841 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 LARGE2Q8N3Y3 721 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 RAB34Q9BZG1 259 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 TMX1Q9H3N1 280 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 PSTPIP2Q9H939 334 aa17.67■□□□□ 0.42
CNN1-210ENST00000592923 PSDA5PKW4 1024 aaPredicted RBP17.66■□□□□ 0.42
CNN1-210ENST00000592923 PSMD14O00487 310 aa17.66■□□□□ 0.42
CNN1-210ENST00000592923 TNNT1P13805 278 aa17.66■□□□□ 0.42
CNN1-210ENST00000592923 DPEP1P16444 411 aa17.66■□□□□ 0.42
CNN1-210ENST00000592923 KCNA3P22001 575 aa17.66■□□□□ 0.42
CNN1-210ENST00000592923 TECP42680 631 aa17.66■□□□□ 0.42
CNN1-210ENST00000592923 SPAG1Q07617 926 aa17.66■□□□□ 0.42
CNN1-210ENST00000592923 NELFBQ8WX92 580 aa17.66■□□□□ 0.42
CNN1-210ENST00000592923 CALML4Q96GE6 196 aa17.66■□□□□ 0.42
CNN1-210ENST00000592923 MMTAG2Q9BU76 263 aaKnown RBP17.66■□□□□ 0.42
CNN1-210ENST00000592923 GTPBP4Q9BZE4 634 aaKnown RBP17.66■□□□□ 0.42
CNN1-210ENST00000592923 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
CNN1-210ENST00000592923 NDUFB10O96000 172 aa17.65■□□□□ 0.42
CNN1-210ENST00000592923 ADSSL1Q8N142 457 aa17.65■□□□□ 0.42
CNN1-210ENST00000592923 ZNF277Q9NRM2 450 aaPredicted RBP17.65■□□□□ 0.42
CNN1-210ENST00000592923 STK17AQ9UEE5 414 aa17.65■□□□□ 0.42
CNN1-210ENST00000592923 ADD3Q9UEY8 706 aaKnown RBP17.65■□□□□ 0.42
CNN1-210ENST00000592923 GDAQ9Y2T3 454 aa17.65■□□□□ 0.42
CNN1-210ENST00000592923 F5H6K3 240 aa17.65■□□□□ 0.42
CNN1-210ENST00000592923 GH2P01242 217 aa17.65■□□□□ 0.42
CNN1-210ENST00000592923 KLRC3Q07444 240 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms