RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
TPM4-215ENST00000592138 PFASO15067 1338 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 ABCB11O95342 1321 aa11.29□□□□□ -0.6
TPM4-215ENST00000592138 CUL9Q8IWT3 2517 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 PNMA6FA0A0J9YX94 578 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
TPM4-215ENST00000592138 PDIA3P30101 505 aaKnown RBP11.28□□□□□ -0.6
TPM4-215ENST00000592138 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 WDR78Q5VTH9 848 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 NBPF11Q86T75 865 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 FBXO11Q86XK2 927 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 SRBD1Q8N5C6 995 aaKnown RBP11.28□□□□□ -0.6
TPM4-215ENST00000592138 SAMD3Q8N6K7 520 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 RGS22Q8NE09 1264 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 ARMC5Q96C12 935 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 TRERF1Q96PN7 1200 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 MMP19Q99542 508 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 AMNQ9BXJ7 453 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 RNF146Q9NTX7 359 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 FAM217BQ9NTX9 383 aaPredicted RBP11.28□□□□□ -0.6
TPM4-215ENST00000592138 PTCH2Q9Y6C5 1203 aa11.28□□□□□ -0.6
TPM4-215ENST00000592138 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
TPM4-215ENST00000592138 MGAMO43451 1857 aa11.27□□□□□ -0.6
TPM4-215ENST00000592138 DNAJC25-GNG10A0A024R161 153 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 PLEKHA8P1O95397 391 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 IGHA2P01877 340 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 ALAS1P13196 640 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 RXRAP19793 462 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 NEK4P51957 841 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 SNAP25P60880 206 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 GHRHRQ02643 423 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 FUT2Q10981 343 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 RABEP1Q15276 862 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 OLFML2BQ68BL8 750 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 ZNF467Q7Z7K2 595 aaPredicted RBP11.27□□□□□ -0.61
TPM4-215ENST00000592138 TEX2Q8IWB9 1127 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 CCDC144CPQ8IYA2 1237 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 MSL3Q8N5Y2 521 aaKnown RBP11.27□□□□□ -0.61
TPM4-215ENST00000592138 CLEC4DQ8WXI8 215 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 RRP36Q96EU6 259 aaKnown RBP11.27□□□□□ -0.61
TPM4-215ENST00000592138 A1CFQ9NQ94 594 aaKnown RBP11.27□□□□□ -0.61
TPM4-215ENST00000592138 MAP3K20Q9NYL2 800 aaKnown RBP11.27□□□□□ -0.61
TPM4-215ENST00000592138 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
TPM4-215ENST00000592138 SEC63Q9UGP8 760 aaKnown RBP11.27□□□□□ -0.61
TPM4-215ENST00000592138 MRPL11Q9Y3B7 192 aaKnown RBP11.27□□□□□ -0.61
TPM4-215ENST00000592138 ZSWIM8A7E2V4 1837 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 CNTNAP5Q8WYK1 1306 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 A0A0C4DFX4 3053 aa11.27□□□□□ -0.61
TPM4-215ENST00000592138 LOC102724159A0A0B4J2E5 919 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 hCG_1984214I3L0E3 225 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 ADCY3O60266 1144 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 HMGCRP04035 888 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 CDC27P30260 824 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 GRK4P32298 578 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 AK2P54819 239 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 PWP2Q15269 919 aaKnown RBP11.26□□□□□ -0.61
TPM4-215ENST00000592138 ZNF792Q3KQV3 632 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 SLC9C1Q4G0N8 1177 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 DPP9Q86TI2 863 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 MCF2L2Q86YR7 1114 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 ANKRD35Q8N283 1001 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 ZNF713Q8N859 430 aaPredicted RBP11.26□□□□□ -0.61
TPM4-215ENST00000592138 PIGSQ96S52 555 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 VAT1LQ9HCJ6 419 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 HOMER2Q9NSB8 354 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 CYP39A1Q9NYL5 469 aa11.26□□□□□ -0.61
TPM4-215ENST00000592138 PPP1R11O60927 126 aaPredicted RBP11.25□□□□□ -0.61
TPM4-215ENST00000592138 COBLO75128 1261 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
TPM4-215ENST00000592138 IFNAR1P17181 557 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 CYP2B6P20813 491 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
TPM4-215ENST00000592138 NTRK3Q16288 839 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 MUM1L1Q5H9M0 696 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 HOMER1Q86YM7 354 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 RAB11FIP4Q86YS3 637 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 FAM133AQ8N9E0 248 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 DDX11Q96FC9 970 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 MAML3Q96JK9 1138 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 ZNF333Q96JL9 665 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 NAP1L2Q9ULW6 460 aaPredicted RBP11.25□□□□□ -0.61
TPM4-215ENST00000592138 PCDHA1Q9Y5I3 950 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 PLXNB2O15031 1838 aa11.25□□□□□ -0.61
TPM4-215ENST00000592138 TRIOBPQ9H2D6 2365 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 NFIBO00712 420 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 PFKFB2O60825 505 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 CAPN2P17655 700 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 SLC4A3P48751 1232 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 UBXN2AP68543 259 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 USH1GQ495M9 461 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 MAP3K21Q5TCX8 1036 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 CPLX2Q6PUV4 134 aaKnown RBP11.24□□□□□ -0.61
TPM4-215ENST00000592138 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 CMTR1Q8N1G2 835 aaKnown RBP11.24□□□□□ -0.61
TPM4-215ENST00000592138 DNERQ8NFT8 737 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 NPLOC4Q8TAT6 608 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 TRIB2Q92519 343 aa11.24□□□□□ -0.61
TPM4-215ENST00000592138 RNF26Q9BY78 433 aaPredicted RBP11.24□□□□□ -0.61
TPM4-215ENST00000592138 NRBP1Q9UHY1 535 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms