RNA–Protein interactions for RNA: ENST00000592076.5

TMC6-222, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 693 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-222	ENST00000592076	VAT1L	Q9HCJ6	419 aa		18.95	■□□□□ 0.62
TMC6-222	ENST00000592076	XPNPEP3	Q9NQH7	507 aa		18.95	■□□□□ 0.62
TMC6-222	ENST00000592076	PPP4R2	Q9NY27	417 aa		18.95	■□□□□ 0.62
TMC6-222	ENST00000592076	CYP39A1	Q9NYL5	469 aa		18.95	■□□□□ 0.62
TMC6-222	ENST00000592076	FAM184B	Q9ULE4	1060 aa		18.95	■□□□□ 0.62
TMC6-222	ENST00000592076		H0YGN5	161 aa		18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	SNAI1	O95863	264 aa	Predicted RBP	18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	MCM5	P33992	734 aa		18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	MNX1	P50219	401 aa	Predicted RBP	18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	ACVR2B	Q13705	512 aa		18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	GJC2	Q5T442	439 aa	Predicted RBP	18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	NFXL1	Q6ZNB6	911 aa		18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	RNF207	Q6ZRF8	634 aa		18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	RNF180	Q86T96	592 aa		18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	CCDC144CP	Q8IYA2	1237 aa		18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	SENP6	Q9GZR1	1112 aa	Predicted RBP	18.94	■□□□□ 0.62
TMC6-222	ENST00000592076	KLRF2	D3W0D1	207 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	NFIB	O00712	420 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	PRC1	O43663	620 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	CALML3	P27482	149 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	BAAT	Q14032	418 aa	Predicted RBP	18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	NECTIN1	Q15223	517 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	C7orf61	Q8IZ16	206 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	NUP133	Q8WUM0	1156 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	FGD4	Q96M96	766 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	SPC25	Q9HBM1	224 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	ALPK3	Q96L96	1907 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	ABCB11	O95342	1321 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	CEP290	O15078	2479 aa		18.93	■□□□□ 0.62
TMC6-222	ENST00000592076	COL6A1	P12109	1028 aa		18.92	■□□□□ 0.62
TMC6-222	ENST00000592076	GRM4	Q14833	912 aa		18.92	■□□□□ 0.62
TMC6-222	ENST00000592076	FBXO11	Q86XK2	927 aa		18.92	■□□□□ 0.62
TMC6-222	ENST00000592076	TMEM87B	Q96K49	555 aa		18.92	■□□□□ 0.62
TMC6-222	ENST00000592076	MTA3	Q9BTC8	594 aa		18.92	■□□□□ 0.62
TMC6-222	ENST00000592076	SOWAHB	A6NEL2	793 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	CCDC69	A6NI79	296 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076		B4DLN1	442 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	MRPL12	P52815	198 aa	Known RBP	18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	ANTXR2	P58335	489 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	TRAF1	Q13077	416 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	LRRC41	Q15345	812 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	QRICH1	Q2TAL8	776 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	NOL8	Q76FK4	1167 aa	Known RBP	18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	MCF2L2	Q86YR7	1114 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	TMTC2	Q8N394	836 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	STAG2	Q8N3U4	1231 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	CTCFL	Q8NI51	663 aa	Predicted RBP	18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	CLEC4D	Q8WXI8	215 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	AMN	Q9BXJ7	453 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	JMJD4	Q9H9V9	463 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	MAD2L2	Q9UI95	211 aa		18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	MRPL11	Q9Y3B7	192 aa	Known RBP	18.91	■□□□□ 0.62
TMC6-222	ENST00000592076	DDAH1	O94760	285 aa		18.9	■□□□□ 0.62
TMC6-222	ENST00000592076	PGK1	P00558	417 aa		18.9	■□□□□ 0.62
TMC6-222	ENST00000592076	KIF5B	P33176	963 aa		18.9	■□□□□ 0.62
TMC6-222	ENST00000592076	KRT32	Q14532	448 aa		18.9	■□□□□ 0.62
TMC6-222	ENST00000592076	CCDC144B	Q3MJ40	725 aa		18.9	■□□□□ 0.62
TMC6-222	ENST00000592076	SLC30A10	Q6XR72	485 aa		18.9	■□□□□ 0.62
TMC6-222	ENST00000592076	HOMER1	Q86YM7	354 aa		18.9	■□□□□ 0.62
TMC6-222	ENST00000592076	IGDCC4	Q8TDY8	1250 aa		18.9	■□□□□ 0.62
TMC6-222	ENST00000592076	LOC102724159	A0A0B4J2E5	919 aa		18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	PALM3	A6NDB9	673 aa	Predicted RBP	18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	DUSP11	O75319	330 aa	Known RBP	18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	REC8	O95072	547 aa		18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	ALDH5A1	P51649	535 aa	Predicted RBP	18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	ATN1	P54259	1190 aa	Predicted RBP	18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	RPS6	P62753	249 aa	Known RBP	18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	PWP2	Q15269	919 aa	Known RBP	18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	ZNF654	Q8IZM8	581 aa		18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	LENG1	Q96BZ8	264 aa	Predicted RBP	18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	NEK1	Q96PY6	1258 aa		18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	LY9	Q9HBG7	655 aa		18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	SENP2	Q9HC62	589 aa		18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	LCT	P09848	1927 aa		18.89	■□□□□ 0.61
TMC6-222	ENST00000592076	SH2B2	O14492	632 aa	Predicted RBP	18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	ZBTB5	O15062	677 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	C6orf222	P0C671	652 aa	Predicted RBP	18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	PDE4D	Q08499	809 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	TROAP	Q12815	778 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	LRRC26	Q2I0M4	334 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	SYNE3	Q6ZMZ3	975 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	EEPD1	Q7L9B9	569 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	RGS22	Q8NE09	1264 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	PURB	Q96QR8	312 aa	Known RBP	18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	MAF1	Q9H063	256 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	VTA1	Q9NP79	307 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	SYNRG	Q9UMZ2	1314 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	LRRC37A2	A6NM11	1700 aa		18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.88	■□□□□ 0.61
TMC6-222	ENST00000592076	CALM1	P0DP23	149 aa		18.87	■□□□□ 0.61
TMC6-222	ENST00000592076	CALM2	P0DP24	149 aa		18.87	■□□□□ 0.61
TMC6-222	ENST00000592076	CALM3	P0DP25	149 aa		18.87	■□□□□ 0.61
TMC6-222	ENST00000592076	ADCYAP1R1	P41586	468 aa		18.87	■□□□□ 0.61
TMC6-222	ENST00000592076	GNAQ	P50148	359 aa		18.87	■□□□□ 0.61
TMC6-222	ENST00000592076	TNFAIP2	Q03169	654 aa		18.87	■□□□□ 0.61
TMC6-222	ENST00000592076	CHRDL2	Q6WN34	429 aa		18.87	■□□□□ 0.61
TMC6-222	ENST00000592076	FBXO16	Q8IX29	292 aa	Predicted RBP	18.87	■□□□□ 0.61
TMC6-222	ENST00000592076	DNER	Q8NFT8	737 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms