RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SENP2Q9HC62 589 aa31.8■■■□□ 2.68
SMAD4-213ENST00000591914 ACVR2BQ13705 512 aa31.79■■■□□ 2.68
SMAD4-213ENST00000591914 WTAPQ15007 396 aa31.79■■■□□ 2.68
SMAD4-213ENST00000591914 CDC37Q16543 378 aaPredicted RBP31.79■■■□□ 2.68
SMAD4-213ENST00000591914 GJC2Q5T442 439 aaPredicted RBP31.79■■■□□ 2.68
SMAD4-213ENST00000591914 STAG2Q8N3U4 1231 aa31.79■■■□□ 2.68
SMAD4-213ENST00000591914 IGDCC4Q8TDY8 1250 aa31.79■■■□□ 2.68
SMAD4-213ENST00000591914 XPNPEP3Q9NQH7 507 aa31.79■■■□□ 2.68
SMAD4-213ENST00000591914 ZHX1Q9UKY1 873 aaPredicted RBP31.79■■■□□ 2.68
SMAD4-213ENST00000591914 BAATQ14032 418 aaPredicted RBP31.78■■■□□ 2.68
SMAD4-213ENST00000591914 TMEM67Q5HYA8 995 aa31.78■■■□□ 2.68
SMAD4-213ENST00000591914 KATNBL1Q9H079 304 aa31.78■■■□□ 2.68
SMAD4-213ENST00000591914 MAD2L2Q9UI95 211 aa31.78■■■□□ 2.68
SMAD4-213ENST00000591914 FAM184BQ9ULE4 1060 aa31.78■■■□□ 2.68
SMAD4-213ENST00000591914 DNAH12Q6ZR08 3092 aa31.78■■■□□ 2.68
SMAD4-213ENST00000591914 PALM3A6NDB9 673 aaPredicted RBP31.77■■■□□ 2.68
SMAD4-213ENST00000591914 ASB14A6NK59 587 aa31.77■■■□□ 2.68
SMAD4-213ENST00000591914 LRRC41Q15345 812 aa31.77■■■□□ 2.68
SMAD4-213ENST00000591914 MTA3Q9BTC8 594 aa31.77■■■□□ 2.68
SMAD4-213ENST00000591914 JMJD4Q9H9V9 463 aa31.77■■■□□ 2.68
SMAD4-213ENST00000591914 KBTBD13C9JR72 458 aa31.76■■■□□ 2.67
SMAD4-213ENST00000591914 KLRF2D3W0D1 207 aa31.76■■■□□ 2.67
SMAD4-213ENST00000591914 TROAPQ12815 778 aa31.76■■■□□ 2.67
SMAD4-213ENST00000591914 GRM4Q14833 912 aa31.76■■■□□ 2.67
SMAD4-213ENST00000591914 ERICH6BQ5W0A0 696 aa31.76■■■□□ 2.67
SMAD4-213ENST00000591914 LENG1Q96BZ8 264 aaPredicted RBP31.76■■■□□ 2.67
SMAD4-213ENST00000591914 SENP6Q9GZR1 1112 aaPredicted RBP31.76■■■□□ 2.67
SMAD4-213ENST00000591914 LRRC26Q2I0M4 334 aa31.75■■■□□ 2.67
SMAD4-213ENST00000591914 QRICH1Q2TAL8 776 aa31.75■■■□□ 2.67
SMAD4-213ENST00000591914 USH1GQ495M9 461 aa31.75■■■□□ 2.67
SMAD4-213ENST00000591914 PURBQ96QR8 312 aaKnown RBP31.75■■■□□ 2.67
SMAD4-213ENST00000591914 LRRC37A2A6NM11 1700 aa31.75■■■□□ 2.67
SMAD4-213ENST00000591914 PTPDC1A2A3K4 754 aa31.74■■■□□ 2.67
SMAD4-213ENST00000591914 PRC1O43663 620 aa31.74■■■□□ 2.67
SMAD4-213ENST00000591914 DHX16O60231 1041 aaKnown RBP31.74■■■□□ 2.67
SMAD4-213ENST00000591914 CENPBP07199 599 aaPredicted RBP31.74■■■□□ 2.67
SMAD4-213ENST00000591914 MCM5P33992 734 aa31.74■■■□□ 2.67
SMAD4-213ENST00000591914 COL9A3Q14050 684 aaPredicted RBP31.74■■■□□ 2.67
SMAD4-213ENST00000591914 CCDC144BQ3MJ40 725 aa31.74■■■□□ 2.67
SMAD4-213ENST00000591914 SLC30A10Q6XR72 485 aa31.74■■■□□ 2.67
SMAD4-213ENST00000591914 RNF207Q6ZRF8 634 aa31.74■■■□□ 2.67
SMAD4-213ENST00000591914 C7orf61Q8IZ16 206 aa31.74■■■□□ 2.67
SMAD4-213ENST00000591914 MORC4Q8TE76 937 aa31.74■■■□□ 2.67
SMAD4-213ENST00000591914 LY9Q9HBG7 655 aa31.74■■■□□ 2.67
SMAD4-213ENST00000591914 PGK1P00558 417 aa31.73■■■□□ 2.67
SMAD4-213ENST00000591914 RNF20Q5VTR2 975 aa31.73■■■□□ 2.67
SMAD4-213ENST00000591914 RGS22Q8NE09 1264 aa31.73■■■□□ 2.67
SMAD4-213ENST00000591914 MTMR8Q96EF0 704 aa31.73■■■□□ 2.67
SMAD4-213ENST00000591914 MAF1Q9H063 256 aa31.73■■■□□ 2.67
SMAD4-213ENST00000591914 VAT1LQ9HCJ6 419 aa31.73■■■□□ 2.67
SMAD4-213ENST00000591914 PPP4R2Q9NY27 417 aa31.73■■■□□ 2.67
SMAD4-213ENST00000591914 ADD3Q9UEY8 706 aaKnown RBP31.73■■■□□ 2.67
SMAD4-213ENST00000591914 ABCB11O95342 1321 aa31.73■■■□□ 2.67
SMAD4-213ENST00000591914 LOC102724159A0A0B4J2E5 919 aa31.72■■■□□ 2.67
SMAD4-213ENST00000591914 ADCY6O43306 1168 aa31.72■■■□□ 2.67
SMAD4-213ENST00000591914 ADAMTS4O75173 837 aa31.72■■■□□ 2.67
SMAD4-213ENST00000591914 DUSP11O75319 330 aaKnown RBP31.72■■■□□ 2.67
SMAD4-213ENST00000591914 MYCNP04198 464 aaPredicted RBP31.72■■■□□ 2.67
SMAD4-213ENST00000591914 RPS6P62753 249 aaKnown RBP31.72■■■□□ 2.67
SMAD4-213ENST00000591914 PWP2Q15269 919 aaKnown RBP31.72■■■□□ 2.67
SMAD4-213ENST00000591914 CATIPQ7Z7H3 387 aa31.72■■■□□ 2.67
SMAD4-213ENST00000591914 RNF180Q86T96 592 aa31.72■■■□□ 2.67
SMAD4-213ENST00000591914 MYH6P13533 1939 aa31.72■■■□□ 2.67
SMAD4-213ENST00000591914 SYNRGQ9UMZ2 1314 aa31.72■■■□□ 2.67
SMAD4-213ENST00000591914 ALDH5A1P51649 535 aaPredicted RBP31.71■■■□□ 2.67
SMAD4-213ENST00000591914 FBXO11Q86XK2 927 aa31.71■■■□□ 2.67
SMAD4-213ENST00000591914 TMEM87BQ96K49 555 aa31.71■■■□□ 2.67
SMAD4-213ENST00000591914 GPHNQ9NQX3 736 aaPredicted RBP31.71■■■□□ 2.67
SMAD4-213ENST00000591914 DDX49Q9Y6V7 483 aaKnown RBP31.71■■■□□ 2.67
SMAD4-213ENST00000591914 CALML3P27482 149 aa31.7■■■□□ 2.67
SMAD4-213ENST00000591914 SLC35G1Q2M3R5 365 aa31.7■■■□□ 2.67
SMAD4-213ENST00000591914 PHF24Q9UPV7 400 aa31.7■■■□□ 2.67
SMAD4-213ENST00000591914 SH2B2O14492 632 aaPredicted RBP31.69■■■□□ 2.66
SMAD4-213ENST00000591914 ADCYAP1R1P41586 468 aa31.69■■■□□ 2.66
SMAD4-213ENST00000591914 MAP3K14Q99558 947 aa31.69■■■□□ 2.66
SMAD4-213ENST00000591914 RIOX1Q9H6W3 641 aa31.69■■■□□ 2.66
SMAD4-213ENST00000591914 COLQQ9Y215 455 aaPredicted RBP31.69■■■□□ 2.66
SMAD4-213ENST00000591914 ZBTB5O15062 677 aa31.68■■■□□ 2.66
SMAD4-213ENST00000591914 ATN1P54259 1190 aaPredicted RBP31.68■■■□□ 2.66
SMAD4-213ENST00000591914 TSGA10IPQ3SY00 556 aa31.68■■■□□ 2.66
SMAD4-213ENST00000591914 ZNF654Q8IZM8 581 aa31.68■■■□□ 2.66
SMAD4-213ENST00000591914 TMTC2Q8N394 836 aa31.68■■■□□ 2.66
SMAD4-213ENST00000591914 KLHDC9Q8NEP7 349 aa31.68■■■□□ 2.66
SMAD4-213ENST00000591914 AMNQ9BXJ7 453 aa31.68■■■□□ 2.66
SMAD4-213ENST00000591914 RANBP2P49792 3224 aaKnown RBP31.68■■■□□ 2.66
SMAD4-213ENST00000591914 DDAH1O94760 285 aa31.67■■■□□ 2.66
SMAD4-213ENST00000591914 LIFRP42702 1097 aa31.67■■■□□ 2.66
SMAD4-213ENST00000591914 DNERQ8NFT8 737 aa31.67■■■□□ 2.66
SMAD4-213ENST00000591914 TSEN34Q9BSV6 310 aaKnown RBP31.67■■■□□ 2.66
SMAD4-213ENST00000591914 UPF3AQ9H1J1 476 aaKnown RBP31.67■■■□□ 2.66
SMAD4-213ENST00000591914 VTA1Q9NP79 307 aa31.67■■■□□ 2.66
SMAD4-213ENST00000591914 MRPL11Q9Y3B7 192 aaKnown RBP31.67■■■□□ 2.66
SMAD4-213ENST00000591914 CYTH3O43739 400 aa31.66■■■□□ 2.66
SMAD4-213ENST00000591914 PPP1R11O60927 126 aaPredicted RBP31.66■■■□□ 2.66
SMAD4-213ENST00000591914 CST5P28325 142 aaPredicted RBP31.66■■■□□ 2.66
SMAD4-213ENST00000591914 SNX17Q15036 470 aa31.66■■■□□ 2.66
SMAD4-213ENST00000591914 CCSAPQ6IQ19 270 aaPredicted RBP31.66■■■□□ 2.66
SMAD4-213ENST00000591914 TAPT1Q6NXT6 567 aa31.66■■■□□ 2.66
SMAD4-213ENST00000591914 CHRDL2Q6WN34 429 aa31.66■■■□□ 2.66
SMAD4-213ENST00000591914 SLC39A5Q6ZMH5 540 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms