RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 ZNFX1Q9P2E3 1918 aaKnown RBP19.12■□□□□ 0.65
CIRBP-233ENST00000591622 COL6A1P12109 1028 aa19.12■□□□□ 0.65
CIRBP-233ENST00000591622 BAATQ14032 418 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-233ENST00000591622 COL9A3Q14050 684 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-233ENST00000591622 USH1GQ495M9 461 aa19.12■□□□□ 0.65
CIRBP-233ENST00000591622 ARMCX2Q7L311 632 aa19.12■□□□□ 0.65
CIRBP-233ENST00000591622 CATIPQ7Z7H3 387 aa19.12■□□□□ 0.65
CIRBP-233ENST00000591622 CCDC144CPQ8IYA2 1237 aa19.12■□□□□ 0.65
CIRBP-233ENST00000591622 ARRDC4Q8NCT1 418 aa19.12■□□□□ 0.65
CIRBP-233ENST00000591622 TMEM87BQ96K49 555 aa19.12■□□□□ 0.65
CIRBP-233ENST00000591622 ABHD16BQ9H3Z7 469 aa19.12■□□□□ 0.65
CIRBP-233ENST00000591622 LY9Q9HBG7 655 aa19.12■□□□□ 0.65
CIRBP-233ENST00000591622 VAT1LQ9HCJ6 419 aa19.12■□□□□ 0.65
CIRBP-233ENST00000591622 GPHNQ9NQX3 736 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-233ENST00000591622 AKR1A1P14550 325 aa19.11■□□□□ 0.65
CIRBP-233ENST00000591622 ACVR2BQ13705 512 aa19.11■□□□□ 0.65
CIRBP-233ENST00000591622 QRICH1Q2TAL8 776 aa19.11■□□□□ 0.65
CIRBP-233ENST00000591622 TSGA10IPQ3SY00 556 aa19.11■□□□□ 0.65
CIRBP-233ENST00000591622 TMTC2Q8N394 836 aa19.11■□□□□ 0.65
CIRBP-233ENST00000591622 PLXNA1Q9UIW2 1896 aa19.11■□□□□ 0.65
CIRBP-233ENST00000591622 ASTN1O14525 1302 aa19.1■□□□□ 0.65
CIRBP-233ENST00000591622 PTPDC1A2A3K4 754 aa19.1■□□□□ 0.65
CIRBP-233ENST00000591622 ASB14A6NK59 587 aa19.1■□□□□ 0.65
CIRBP-233ENST00000591622 DNM1LO00429 736 aa19.1■□□□□ 0.65
CIRBP-233ENST00000591622 SH2B2O14492 632 aaPredicted RBP19.1■□□□□ 0.65
CIRBP-233ENST00000591622 RARBP10826 455 aa19.1■□□□□ 0.65
CIRBP-233ENST00000591622 RNF207Q6ZRF8 634 aa19.1■□□□□ 0.65
CIRBP-233ENST00000591622 FBXO11Q86XK2 927 aa19.1■□□□□ 0.65
CIRBP-233ENST00000591622 RASEFQ8IZ41 740 aa19.1■□□□□ 0.65
CIRBP-233ENST00000591622 NEK1Q96PY6 1258 aa19.1■□□□□ 0.65
CIRBP-233ENST00000591622 PURBQ96QR8 312 aaKnown RBP19.1■□□□□ 0.65
CIRBP-233ENST00000591622 ADD3Q9UEY8 706 aaKnown RBP19.1■□□□□ 0.65
CIRBP-233ENST00000591622 ZHX1Q9UKY1 873 aaPredicted RBP19.1■□□□□ 0.65
CIRBP-233ENST00000591622 FAM184BQ9ULE4 1060 aa19.1■□□□□ 0.65
CIRBP-233ENST00000591622 ABCB11O95342 1321 aa19.09■□□□□ 0.65
CIRBP-233ENST00000591622 LIFRP42702 1097 aa19.09■□□□□ 0.65
CIRBP-233ENST00000591622 KRT32Q14532 448 aa19.09■□□□□ 0.65
CIRBP-233ENST00000591622 GJC2Q5T442 439 aaPredicted RBP19.09■□□□□ 0.65
CIRBP-233ENST00000591622 SLC30A10Q6XR72 485 aa19.09■□□□□ 0.65
CIRBP-233ENST00000591622 ZNF654Q8IZM8 581 aa19.09■□□□□ 0.65
CIRBP-233ENST00000591622 RGS22Q8NE09 1264 aa19.09■□□□□ 0.65
CIRBP-233ENST00000591622 MTMR8Q96EF0 704 aa19.09■□□□□ 0.65
CIRBP-233ENST00000591622 MAP3K14Q99558 947 aa19.09■□□□□ 0.65
CIRBP-233ENST00000591622 KATNBL1Q9H079 304 aa19.09■□□□□ 0.65
CIRBP-233ENST00000591622 XPNPEP3Q9NQH7 507 aa19.09■□□□□ 0.65
CIRBP-233ENST00000591622 CCDC69A6NI79 296 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 ZBTB5O15062 677 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 EVI5O60447 810 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 DDAH1O94760 285 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 REC8O95072 547 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 CALML3P27482 149 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 RPS6P62753 249 aaKnown RBP19.08■□□□□ 0.64
CIRBP-233ENST00000591622 SLC35G1Q2M3R5 365 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 CCDC144BQ3MJ40 725 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 NFXL1Q6ZNB6 911 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 NUP133Q8WUM0 1156 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 AMNQ9BXJ7 453 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 MAF1Q9H063 256 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 RIOX1Q9H6W3 641 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 NR2E3Q9Y5X4 410 aa19.08■□□□□ 0.64
CIRBP-233ENST00000591622 KBTBD13C9JR72 458 aa19.07■□□□□ 0.64
CIRBP-233ENST00000591622 H0YGN5 161 aa19.07■□□□□ 0.64
CIRBP-233ENST00000591622 MYCNP04198 464 aaPredicted RBP19.07■□□□□ 0.64
CIRBP-233ENST00000591622 EXOSC10Q01780 885 aaKnown RBP19.07■□□□□ 0.64
CIRBP-233ENST00000591622 LRRC41Q15345 812 aa19.07■□□□□ 0.64
CIRBP-233ENST00000591622 ADCK5Q3MIX3 580 aa19.07■□□□□ 0.64
CIRBP-233ENST00000591622 CTCFLQ8NI51 663 aaPredicted RBP19.07■□□□□ 0.64
CIRBP-233ENST00000591622 MORC4Q8TE76 937 aa19.07■□□□□ 0.64
CIRBP-233ENST00000591622 KCNB2Q92953 911 aa19.07■□□□□ 0.64
CIRBP-233ENST00000591622 MYL10Q9BUA6 226 aa19.07■□□□□ 0.64
CIRBP-233ENST00000591622 SENP6Q9GZR1 1112 aaPredicted RBP19.07■□□□□ 0.64
CIRBP-233ENST00000591622 MRPL11Q9Y3B7 192 aaKnown RBP19.07■□□□□ 0.64
CIRBP-233ENST00000591622 DDX49Q9Y6V7 483 aaKnown RBP19.07■□□□□ 0.64
CIRBP-233ENST00000591622 PDE4DIPQ5VU43 2346 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 LOC102724159A0A0B4J2E5 919 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 CYTH3O43739 400 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 PPP1R11O60927 126 aaPredicted RBP19.06■□□□□ 0.64
CIRBP-233ENST00000591622 PGK1P00558 417 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 KIF5BP33176 963 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 HSPA4P34932 840 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 ALDH5A1P51649 535 aaPredicted RBP19.06■□□□□ 0.64
CIRBP-233ENST00000591622 PWP2Q15269 919 aaKnown RBP19.06■□□□□ 0.64
CIRBP-233ENST00000591622 DHX32Q7L7V1 743 aaKnown RBP19.06■□□□□ 0.64
CIRBP-233ENST00000591622 HOMER1Q86YM7 354 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 MCF2L2Q86YR7 1114 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 LENG1Q96BZ8 264 aaPredicted RBP19.06■□□□□ 0.64
CIRBP-233ENST00000591622 PIGSQ96S52 555 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 LRRC2Q9BYS8 371 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 FRMPD3Q5JV73 1810 aa19.06■□□□□ 0.64
CIRBP-233ENST00000591622 ADCY6O43306 1168 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 DUSP11O75319 330 aaKnown RBP19.05■□□□□ 0.64
CIRBP-233ENST00000591622 HMGB1P09429 215 aaKnown RBP19.05■□□□□ 0.64
CIRBP-233ENST00000591622 CALM1P0DP23 149 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 CALM2P0DP24 149 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 CALM3P0DP25 149 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 TRAF1Q13077 416 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 RNF180Q86T96 592 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 SGMS1Q86VZ5 419 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 DNERQ8NFT8 737 aa19.05■□□□□ 0.64
CIRBP-233ENST00000591622 TBC1D5Q92609 795 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms