RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 MTMR8Q96EF0 704 aa21.3■■□□□ 1
DDX39A-212ENST00000590260 PDE4DIPQ5VU43 2346 aa21.3■■□□□ 1
DDX39A-212ENST00000590260 CYTH3O43739 400 aa21.29■■□□□ 1
DDX39A-212ENST00000590260 PPP1R11O60927 126 aaPredicted RBP21.29■■□□□ 1
DDX39A-212ENST00000590260 QRICH1Q2TAL8 776 aa21.29■■□□□ 1
DDX39A-212ENST00000590260 SLC30A10Q6XR72 485 aa21.29■■□□□ 1
DDX39A-212ENST00000590260 MSL3Q8N5Y2 521 aaKnown RBP21.29■■□□□ 1
DDX39A-212ENST00000590260 KCNB2Q92953 911 aa21.29■■□□□ 1
DDX39A-212ENST00000590260 LRRC2Q9BYS8 371 aa21.29■■□□□ 1
DDX39A-212ENST00000590260 NRBP1Q9UHY1 535 aa21.29■■□□□ 1
DDX39A-212ENST00000590260 KLRF2D3W0D1 207 aa21.28■■□□□ 1
DDX39A-212ENST00000590260 POTEB2H3BUK9 544 aa21.28■■□□□ 1
DDX39A-212ENST00000590260 BAATQ14032 418 aaPredicted RBP21.28■■□□□ 1
DDX39A-212ENST00000590260 TSGA10IPQ3SY00 556 aa21.28■■□□□ 1
DDX39A-212ENST00000590260 NSMFQ6X4W1 530 aa21.28■■□□□ 1
DDX39A-212ENST00000590260 ARMCX2Q7L311 632 aa21.28■■□□□ 1
DDX39A-212ENST00000590260 CCDC144CPQ8IYA2 1237 aa21.28■■□□□ 1
DDX39A-212ENST00000590260 TBC1D5Q92609 795 aa21.28■■□□□ 1
DDX39A-212ENST00000590260 MYL10Q9BUA6 226 aa21.28■■□□□ 1
DDX39A-212ENST00000590260 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.28■■□□□ 1
DDX39A-212ENST00000590260 EXOSC10Q01780 885 aaKnown RBP21.27■■□□□ 1
DDX39A-212ENST00000590260 USH1GQ495M9 461 aa21.27■■□□□ 1
DDX39A-212ENST00000590260 CASC1Q6TDU7 716 aa21.27■■□□□ 1
DDX39A-212ENST00000590260 NECAB2Q7Z6G3 386 aa21.27■■□□□ 1
DDX39A-212ENST00000590260 MTA3Q9BTC8 594 aa21.27■■□□□ 1
DDX39A-212ENST00000590260 VAT1LQ9HCJ6 419 aa21.27■■□□□ 1
DDX39A-212ENST00000590260 MYH6P13533 1939 aa21.27■■□□□ 1
DDX39A-212ENST00000590260 OPLAHO14841 1288 aa21.26■□□□□ 0.99
DDX39A-212ENST00000590260 MSCO60682 206 aa21.26■□□□□ 0.99
DDX39A-212ENST00000590260 MCM5P33992 734 aa21.26■□□□□ 0.99
DDX39A-212ENST00000590260 PRPF38BQ5VTL8 546 aaKnown RBP21.26■□□□□ 0.99
DDX39A-212ENST00000590260 ZNF654Q8IZM8 581 aa21.26■□□□□ 0.99
DDX39A-212ENST00000590260 C11orf49Q9H6J7 331 aa21.26■□□□□ 0.99
DDX39A-212ENST00000590260 RIOX1Q9H6W3 641 aa21.26■□□□□ 0.99
DDX39A-212ENST00000590260 ERICH2A1L162 156 aa21.25■□□□□ 0.99
DDX39A-212ENST00000590260 IRX5P78411 483 aaPredicted RBP21.25■□□□□ 0.99
DDX39A-212ENST00000590260 ACVR2BQ13705 512 aa21.25■□□□□ 0.99
DDX39A-212ENST00000590260 GJC2Q5T442 439 aaPredicted RBP21.25■□□□□ 0.99
DDX39A-212ENST00000590260 MORC4Q8TE76 937 aa21.25■□□□□ 0.99
DDX39A-212ENST00000590260 TMEM87BQ96K49 555 aa21.25■□□□□ 0.99
DDX39A-212ENST00000590260 TCEANC2Q96MN5 208 aa21.25■□□□□ 0.99
DDX39A-212ENST00000590260 PTGS1P23219 599 aa21.24■□□□□ 0.99
DDX39A-212ENST00000590260 HSPA4P34932 840 aa21.24■□□□□ 0.99
DDX39A-212ENST00000590260 RPS6P62753 249 aaKnown RBP21.24■□□□□ 0.99
DDX39A-212ENST00000590260 SART3Q15020 963 aaKnown RBP21.24■□□□□ 0.99
DDX39A-212ENST00000590260 TMEM63BQ5T3F8 832 aa21.24■□□□□ 0.99
DDX39A-212ENST00000590260 NEK1Q96PY6 1258 aa21.24■□□□□ 0.99
DDX39A-212ENST00000590260 COL20A1Q9P218 1284 aa21.24■□□□□ 0.99
DDX39A-212ENST00000590260 ZHX1Q9UKY1 873 aaPredicted RBP21.24■□□□□ 0.99
DDX39A-212ENST00000590260 ADAMTS4O75173 837 aa21.23■□□□□ 0.99
DDX39A-212ENST00000590260 CPA1P15085 419 aa21.23■□□□□ 0.99
DDX39A-212ENST00000590260 RXRAP19793 462 aa21.23■□□□□ 0.99
DDX39A-212ENST00000590260 LIFRP42702 1097 aa21.23■□□□□ 0.99
DDX39A-212ENST00000590260 LRRC41Q15345 812 aa21.23■□□□□ 0.99
DDX39A-212ENST00000590260 RAB11FIP4Q86YS3 637 aa21.23■□□□□ 0.99
DDX39A-212ENST00000590260 PIGSQ96S52 555 aa21.23■□□□□ 0.99
DDX39A-212ENST00000590260 PCDH10Q9P2E7 1040 aa21.23■□□□□ 0.99
DDX39A-212ENST00000590260 CNPY2Q9Y2B0 182 aa21.23■□□□□ 0.99
DDX39A-212ENST00000590260 SNX14Q9Y5W7 946 aa21.23■□□□□ 0.99
DDX39A-212ENST00000590260 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.22■□□□□ 0.99
DDX39A-212ENST00000590260 PTPDC1A2A3K4 754 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 H0YGN5 161 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 DNM1LO00429 736 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 PGK1P00558 417 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 AKR1A1P14550 325 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 CALML3P27482 149 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 ALDH5A1P51649 535 aaPredicted RBP21.22■□□□□ 0.99
DDX39A-212ENST00000590260 CCDC144BQ3MJ40 725 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 RNF20Q5VTR2 975 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 RNF207Q6ZRF8 634 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 CATIPQ7Z7H3 387 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 SGMS1Q86VZ5 419 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 FBXO11Q86XK2 927 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 MAP3K14Q99558 947 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 HTATIP2Q9BUP3 242 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 ABHD16BQ9H3Z7 469 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 ABCB11O95342 1321 aa21.22■□□□□ 0.99
DDX39A-212ENST00000590260 MYADML2A6NDP7 307 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 ZBTB5O15062 677 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 DHX16O60231 1041 aaKnown RBP21.21■□□□□ 0.99
DDX39A-212ENST00000590260 DDAH1O94760 285 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 PLEKHA8P1O95397 391 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 LRRC26Q2I0M4 334 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 TAPT1Q6NXT6 567 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 RGS22Q8NE09 1264 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 NUP133Q8WUM0 1156 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 DPF3Q92784 378 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 XPNPEP3Q9NQH7 507 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 PDGFCQ9NRA1 345 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 PNMA2Q9UL42 364 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 BRPF3Q9ULD4 1205 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 SYNRGQ9UMZ2 1314 aa21.21■□□□□ 0.99
DDX39A-212ENST00000590260 DNAH12Q6ZR08 3092 aa21.2■□□□□ 0.99
DDX39A-212ENST00000590260 BAZ2BQ9UIF8 2168 aaKnown RBP21.2■□□□□ 0.98
DDX39A-212ENST00000590260 ASB14A6NK59 587 aa21.2■□□□□ 0.98
DDX39A-212ENST00000590260 CTAGE5O15320 804 aa21.2■□□□□ 0.98
DDX39A-212ENST00000590260 EDNRBP24530 442 aa21.2■□□□□ 0.98
DDX39A-212ENST00000590260 DHX32Q7L7V1 743 aaKnown RBP21.2■□□□□ 0.98
DDX39A-212ENST00000590260 CMTR1Q8N1G2 835 aaKnown RBP21.2■□□□□ 0.98
DDX39A-212ENST00000590260 SYTL5Q8TDW5 730 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms