RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 KLRF2D3W0D1 207 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 DNM1LO00429 736 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 NFIBO00712 420 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 PGK1P00558 417 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 COL6A1P12109 1028 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 CALML3P27482 149 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 ATN1P54259 1190 aaPredicted RBP14.09□□□□□ -0.15
TPM4-212ENST00000590180 NECTIN1Q15223 517 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 LRRC41Q15345 812 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 CDC37Q16543 378 aaPredicted RBP14.09□□□□□ -0.15
TPM4-212ENST00000590180 RNF20Q5VTR2 975 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 RNF207Q6ZRF8 634 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 CATIPQ7Z7H3 387 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 C7orf61Q8IZ16 206 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 STAG2Q8N3U4 1231 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 FGD4Q96M96 766 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 PURBQ96QR8 312 aaKnown RBP14.09□□□□□ -0.15
TPM4-212ENST00000590180 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
TPM4-212ENST00000590180 PRC1O43663 620 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 MCM5P33992 734 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 ADCYAP1R1P41586 468 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 ANTXR2P58335 489 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 CCDC144BQ3MJ40 725 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 NFXL1Q6ZNB6 911 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 NOL8Q76FK4 1167 aaKnown RBP14.08□□□□□ -0.16
TPM4-212ENST00000590180 EEPD1Q7L9B9 569 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 RNF180Q86T96 592 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 MB21D2Q8IYB1 491 aaPredicted RBP14.08□□□□□ -0.16
TPM4-212ENST00000590180 IGDCC4Q8TDY8 1250 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 NUP133Q8WUM0 1156 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 CLEC4DQ8WXI8 215 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 FERMT2Q96AC1 680 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 JMJD4Q9H9V9 463 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 PPP4R2Q9NY27 417 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 ADD3Q9UEY8 706 aaKnown RBP14.08□□□□□ -0.16
TPM4-212ENST00000590180 WDR19Q8NEZ3 1342 aa14.08□□□□□ -0.16
TPM4-212ENST00000590180 LAMA4Q16363 1823 aa14.07□□□□□ -0.16
TPM4-212ENST00000590180 PALM3A6NDB9 673 aaPredicted RBP14.07□□□□□ -0.16
TPM4-212ENST00000590180 GRM4Q14833 912 aa14.07□□□□□ -0.16
TPM4-212ENST00000590180 QRICH1Q2TAL8 776 aa14.07□□□□□ -0.16
TPM4-212ENST00000590180 FBXO11Q86XK2 927 aa14.07□□□□□ -0.16
TPM4-212ENST00000590180 LENG1Q96BZ8 264 aaPredicted RBP14.07□□□□□ -0.16
TPM4-212ENST00000590180 GPHNQ9NQX3 736 aaPredicted RBP14.07□□□□□ -0.16
TPM4-212ENST00000590180 MAD2L2Q9UI95 211 aa14.07□□□□□ -0.16
TPM4-212ENST00000590180 ZMYND8Q9ULU4 1186 aaPredicted RBP14.07□□□□□ -0.16
TPM4-212ENST00000590180 COLQQ9Y215 455 aaPredicted RBP14.07□□□□□ -0.16
TPM4-212ENST00000590180 DDX49Q9Y6V7 483 aaKnown RBP14.07□□□□□ -0.16
TPM4-212ENST00000590180 MKI67P46013 3256 aaKnown RBP14.07□□□□□ -0.16
TPM4-212ENST00000590180 PLXNA1Q9UIW2 1896 aa14.06□□□□□ -0.16
TPM4-212ENST00000590180 SYN1P17600 705 aa14.06□□□□□ -0.16
TPM4-212ENST00000590180 RPS6P62753 249 aaKnown RBP14.06□□□□□ -0.16
TPM4-212ENST00000590180 LRRC26Q2I0M4 334 aa14.06□□□□□ -0.16
TPM4-212ENST00000590180 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
TPM4-212ENST00000590180 TMTC2Q8N394 836 aa14.06□□□□□ -0.16
TPM4-212ENST00000590180 TBC1D5Q92609 795 aa14.06□□□□□ -0.16
TPM4-212ENST00000590180 SPC25Q9HBM1 224 aa14.06□□□□□ -0.16
TPM4-212ENST00000590180 MRPL11Q9Y3B7 192 aaKnown RBP14.06□□□□□ -0.16
TPM4-212ENST00000590180 ABCB11O95342 1321 aa14.06□□□□□ -0.16
TPM4-212ENST00000590180 CCDC69A6NI79 296 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 DUSP11O75319 330 aaKnown RBP14.05□□□□□ -0.16
TPM4-212ENST00000590180 ALDH5A1P51649 535 aaPredicted RBP14.05□□□□□ -0.16
TPM4-212ENST00000590180 TNFAIP2Q03169 654 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 TROAPQ12815 778 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 SLC30A10Q6XR72 485 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 SLC39A5Q6ZMH5 540 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 HOMER1Q86YM7 354 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 MCF2L2Q86YR7 1114 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 PIBF1Q8WXW3 757 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 TMEM87BQ96K49 555 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 MPHOSPH6Q99547 160 aaKnown RBP14.05□□□□□ -0.16
TPM4-212ENST00000590180 MTA3Q9BTC8 594 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 AMNQ9BXJ7 453 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 LRRC2Q9BYS8 371 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 LY9Q9HBG7 655 aa14.05□□□□□ -0.16
TPM4-212ENST00000590180 B4DLN1 442 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 C6orf222P0C671 652 aaPredicted RBP14.04□□□□□ -0.16
TPM4-212ENST00000590180 MRPL12P52815 198 aaKnown RBP14.04□□□□□ -0.16
TPM4-212ENST00000590180 KCNA10Q16322 511 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 IQSEC1Q6DN90 963 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 FBXO16Q8IX29 292 aaPredicted RBP14.04□□□□□ -0.16
TPM4-212ENST00000590180 ZNF654Q8IZM8 581 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 CTCFLQ8NI51 663 aaPredicted RBP14.04□□□□□ -0.16
TPM4-212ENST00000590180 VTI1AQ96AJ9 217 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 NEK1Q96PY6 1258 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 PIGSQ96S52 555 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 MYL10Q9BUA6 226 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 KATNBL1Q9H079 304 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 PDGFCQ9NRA1 345 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 PHF24Q9UPV7 400 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 ATP11BQ9Y2G3 1177 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 PCDHA1Q9Y5I3 950 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 ASTN1O14525 1302 aa14.04□□□□□ -0.16
TPM4-212ENST00000590180 BAZ2BQ9UIF8 2168 aaKnown RBP14.03□□□□□ -0.16
TPM4-212ENST00000590180 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.03□□□□□ -0.16
TPM4-212ENST00000590180 SH2B2O14492 632 aaPredicted RBP14.03□□□□□ -0.16
TPM4-212ENST00000590180 ZBTB5O15062 677 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 DYNC1LI2O43237 492 aaPredicted RBP14.03□□□□□ -0.16
TPM4-212ENST00000590180 ADAMTS4O75173 837 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms