RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 LTBP2Q14767 1821 aa18.9■□□□□ 0.62
CXXC1-209ENST00000587342 LAMA3Q16787 3333 aa18.89■□□□□ 0.62
CXXC1-209ENST00000587342 NT5C2P49902 561 aa18.89■□□□□ 0.61
CXXC1-209ENST00000587342 NSMFQ6X4W1 530 aa18.89■□□□□ 0.61
CXXC1-209ENST00000587342 SLC30A10Q6XR72 485 aa18.89■□□□□ 0.61
CXXC1-209ENST00000587342 RUFY2Q8WXA3 655 aa18.89■□□□□ 0.61
CXXC1-209ENST00000587342 KRT23Q9C075 422 aa18.89■□□□□ 0.61
CXXC1-209ENST00000587342 UBA5Q9GZZ9 404 aa18.89■□□□□ 0.61
CXXC1-209ENST00000587342 KAT14Q9H8E8 782 aa18.89■□□□□ 0.61
CXXC1-209ENST00000587342 CNNM2Q9H8M5 875 aa18.89■□□□□ 0.61
CXXC1-209ENST00000587342 SENP2Q9HC62 589 aa18.89■□□□□ 0.61
CXXC1-209ENST00000587342 SZT2Q5T011 3432 aa18.88■□□□□ 0.61
CXXC1-209ENST00000587342 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.88■□□□□ 0.61
CXXC1-209ENST00000587342 COL9A3Q14050 684 aaPredicted RBP18.88■□□□□ 0.61
CXXC1-209ENST00000587342 CCDC144BQ3MJ40 725 aa18.88■□□□□ 0.61
CXXC1-209ENST00000587342 TRIM60Q495X7 471 aa18.88■□□□□ 0.61
CXXC1-209ENST00000587342 CCSAPQ6IQ19 270 aaPredicted RBP18.88■□□□□ 0.61
CXXC1-209ENST00000587342 SLC39A5Q6ZMH5 540 aa18.88■□□□□ 0.61
CXXC1-209ENST00000587342 ABHD16BQ9H3Z7 469 aa18.88■□□□□ 0.61
CXXC1-209ENST00000587342 FAM184BQ9ULE4 1060 aa18.88■□□□□ 0.61
CXXC1-209ENST00000587342 CTAGE5O15320 804 aa18.87■□□□□ 0.61
CXXC1-209ENST00000587342 BAATQ14032 418 aaPredicted RBP18.87■□□□□ 0.61
CXXC1-209ENST00000587342 CCDC178Q5BJE1 867 aa18.87■□□□□ 0.61
CXXC1-209ENST00000587342 TMEM63BQ5T3F8 832 aa18.87■□□□□ 0.61
CXXC1-209ENST00000587342 GPATCH4Q5T3I0 446 aaKnown RBP18.87■□□□□ 0.61
CXXC1-209ENST00000587342 KLHDC9Q8NEP7 349 aa18.87■□□□□ 0.61
CXXC1-209ENST00000587342 WDR19Q8NEZ3 1342 aa18.87■□□□□ 0.61
CXXC1-209ENST00000587342 UBAC1Q9BSL1 405 aa18.87■□□□□ 0.61
CXXC1-209ENST00000587342 ATP11BQ9Y2G3 1177 aa18.87■□□□□ 0.61
CXXC1-209ENST00000587342 U3KPZ7 1027 aaPredicted RBP18.87■□□□□ 0.61
CXXC1-209ENST00000587342 A0A1W2PQ45 241 aaPredicted RBP18.86■□□□□ 0.61
CXXC1-209ENST00000587342 A0A1W2PQY0 241 aa18.86■□□□□ 0.61
CXXC1-209ENST00000587342 SOX1O00570 391 aaPredicted RBP18.86■□□□□ 0.61
CXXC1-209ENST00000587342 ANTXR2P58335 489 aa18.86■□□□□ 0.61
CXXC1-209ENST00000587342 CDC37Q16543 378 aaPredicted RBP18.86■□□□□ 0.61
CXXC1-209ENST00000587342 SLC35G1Q2M3R5 365 aa18.86■□□□□ 0.61
CXXC1-209ENST00000587342 CENPQQ7L2Z9 268 aaPredicted RBP18.86■□□□□ 0.61
CXXC1-209ENST00000587342 RNF180Q86T96 592 aa18.86■□□□□ 0.61
CXXC1-209ENST00000587342 FBXO16Q8IX29 292 aaPredicted RBP18.86■□□□□ 0.61
CXXC1-209ENST00000587342 STAG2Q8N3U4 1231 aa18.86■□□□□ 0.61
CXXC1-209ENST00000587342 MORC4Q8TE76 937 aa18.86■□□□□ 0.61
CXXC1-209ENST00000587342 MAP4K1Q92918 833 aa18.86■□□□□ 0.61
CXXC1-209ENST00000587342 LSG1Q9H089 658 aaKnown RBP18.86■□□□□ 0.61
CXXC1-209ENST00000587342 UPF3AQ9H1J1 476 aaKnown RBP18.86■□□□□ 0.61
CXXC1-209ENST00000587342 RBM8AQ9Y5S9 174 aaKnown RBP18.86■□□□□ 0.61
CXXC1-209ENST00000587342 E7EWF7 191 aa18.85■□□□□ 0.61
CXXC1-209ENST00000587342 DUSP11O75319 330 aaKnown RBP18.85■□□□□ 0.61
CXXC1-209ENST00000587342 BMP8BP34820 402 aa18.85■□□□□ 0.61
CXXC1-209ENST00000587342 USH1GQ495M9 461 aa18.85■□□□□ 0.61
CXXC1-209ENST00000587342 ASPRV1Q53RT3 343 aa18.85■□□□□ 0.61
CXXC1-209ENST00000587342 ADGRF4Q8IZF3 695 aa18.85■□□□□ 0.61
CXXC1-209ENST00000587342 PDGFCQ9NRA1 345 aa18.85■□□□□ 0.61
CXXC1-209ENST00000587342 ASB14A6NK59 587 aa18.84■□□□□ 0.61
CXXC1-209ENST00000587342 CST5P28325 142 aaPredicted RBP18.84■□□□□ 0.61
CXXC1-209ENST00000587342 ACLYP53396 1101 aa18.84■□□□□ 0.61
CXXC1-209ENST00000587342 MDM2Q00987 491 aaPredicted RBP18.84■□□□□ 0.61
CXXC1-209ENST00000587342 IFIT1BQ5T764 474 aaKnown RBP18.84■□□□□ 0.61
CXXC1-209ENST00000587342 C1orf53Q5VUE5 145 aa18.84■□□□□ 0.61
CXXC1-209ENST00000587342 TAPT1Q6NXT6 567 aa18.84■□□□□ 0.61
CXXC1-209ENST00000587342 EEPD1Q7L9B9 569 aa18.84■□□□□ 0.61
CXXC1-209ENST00000587342 CHST3Q7LGC8 479 aa18.84■□□□□ 0.61
CXXC1-209ENST00000587342 SH3RF1Q7Z6J0 888 aa18.84■□□□□ 0.61
CXXC1-209ENST00000587342 ESYT1Q9BSJ8 1104 aa18.84■□□□□ 0.61
CXXC1-209ENST00000587342 JMJD4Q9H9V9 463 aa18.84■□□□□ 0.61
CXXC1-209ENST00000587342 PDLIM7Q9NR12 457 aa18.84■□□□□ 0.61
CXXC1-209ENST00000587342 A0A1W2PPC1 479 aa18.83■□□□□ 0.6
CXXC1-209ENST00000587342 PTPDC1A2A3K4 754 aa18.83■□□□□ 0.6
CXXC1-209ENST00000587342 PARP1P09874 1014 aaKnown RBP18.83■□□□□ 0.6
CXXC1-209ENST00000587342 SMPD1P17405 629 aa18.83■□□□□ 0.6
CXXC1-209ENST00000587342 CALML3P27482 149 aa18.83■□□□□ 0.6
CXXC1-209ENST00000587342 ALDH5A1P51649 535 aaPredicted RBP18.83■□□□□ 0.6
CXXC1-209ENST00000587342 GJA9P57773 515 aa18.83■□□□□ 0.6
CXXC1-209ENST00000587342 RPS6P62753 249 aaKnown RBP18.83■□□□□ 0.6
CXXC1-209ENST00000587342 KCNA10Q16322 511 aa18.83■□□□□ 0.6
CXXC1-209ENST00000587342 QRICH1Q2TAL8 776 aa18.83■□□□□ 0.6
CXXC1-209ENST00000587342 MB21D2Q8IYB1 491 aaPredicted RBP18.83■□□□□ 0.6
CXXC1-209ENST00000587342 MAD2L2Q9UI95 211 aa18.83■□□□□ 0.6
CXXC1-209ENST00000587342 GNEQ9Y223 722 aaKnown RBP18.83■□□□□ 0.6
CXXC1-209ENST00000587342 PPP1R11O60927 126 aaPredicted RBP18.82■□□□□ 0.6
CXXC1-209ENST00000587342 C6orf222P0C671 652 aaPredicted RBP18.82■□□□□ 0.6
CXXC1-209ENST00000587342 TLE2Q04725 743 aa18.82■□□□□ 0.6
CXXC1-209ENST00000587342 BMP2KLQ5H9B9 411 aa18.82■□□□□ 0.6
CXXC1-209ENST00000587342 RNF207Q6ZRF8 634 aa18.82■□□□□ 0.6
CXXC1-209ENST00000587342 TBC1D5Q92609 795 aa18.82■□□□□ 0.6
CXXC1-209ENST00000587342 TSEN34Q9BSV6 310 aaKnown RBP18.82■□□□□ 0.6
CXXC1-209ENST00000587342 GPHNQ9NQX3 736 aaPredicted RBP18.82■□□□□ 0.6
CXXC1-209ENST00000587342 TRIM43BA6NCK2 446 aa18.81■□□□□ 0.6
CXXC1-209ENST00000587342 ITGB8P26012 769 aa18.81■□□□□ 0.6
CXXC1-209ENST00000587342 NKX3-2P78367 333 aa18.81■□□□□ 0.6
CXXC1-209ENST00000587342 BEX3Q00994 111 aa18.81■□□□□ 0.6
CXXC1-209ENST00000587342 TNFAIP2Q03169 654 aa18.81■□□□□ 0.6
CXXC1-209ENST00000587342 TRIM43Q96BQ3 446 aaPredicted RBP18.81■□□□□ 0.6
CXXC1-209ENST00000587342 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
CXXC1-209ENST00000587342 PALM3A6NDB9 673 aaPredicted RBP18.8■□□□□ 0.6
CXXC1-209ENST00000587342 OPLAHO14841 1288 aa18.8■□□□□ 0.6
CXXC1-209ENST00000587342 IFIT3O14879 490 aaKnown RBP18.8■□□□□ 0.6
CXXC1-209ENST00000587342 EDNRBP24530 442 aa18.8■□□□□ 0.6
CXXC1-209ENST00000587342 TRDNQ13061 729 aa18.8■□□□□ 0.6
CXXC1-209ENST00000587342 GRM4Q14833 912 aa18.8■□□□□ 0.6
CXXC1-209ENST00000587342 RALYLQ86SE5 291 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms