RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
GGA3-213ENST00000582486 STAT2P52630 851 aa12.71□□□□□ -0.37
GGA3-213ENST00000582486 DHX40Q8IX18 779 aaKnown RBP12.71□□□□□ -0.37
GGA3-213ENST00000582486 TRPM4Q8TD43 1214 aa12.71□□□□□ -0.37
GGA3-213ENST00000582486 UBE2Q2Q8WVN8 375 aa12.71□□□□□ -0.37
GGA3-213ENST00000582486 NAT10Q9H0A0 1025 aaKnown RBP12.71□□□□□ -0.37
GGA3-213ENST00000582486 USP17L15C9J2P7 530 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 USP17L13C9JLJ4 530 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 USP17L11C9JVI0 530 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 USP17L18D6R9N7 530 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 USP17L22D6RA61 530 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 USP17L17D6RBQ6 530 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 USP17L19D6RCP7 530 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 USP17L20D6RJB6 530 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 LAD1O00515 517 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 NEMFO60524 1076 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 SLFN14P0C7P3 912 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 USP17L24Q0WX57 530 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 USH1GQ495M9 461 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 NBPF12Q5TAG4 269 aaPredicted RBP12.71□□□□□ -0.38
GGA3-213ENST00000582486 KANK3Q6NY19 840 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 USP17L6PQ6QN14 398 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 AMNQ9BXJ7 453 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 VCPKMTQ9H867 229 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 GPRC5DQ9NZD1 345 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 PRR12Q9ULL5 1215 aa12.71□□□□□ -0.38
GGA3-213ENST00000582486 BECN2A8MW95 431 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 GOLGA6L19H0YKK7 550 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 PRPHP41219 470 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 ANGEL2Q5VTE6 544 aaKnown RBP12.7□□□□□ -0.38
GGA3-213ENST00000582486 FBXO11Q86XK2 927 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 GPC2Q8N158 579 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 PP2D1A8MPX8 630 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 OR52Z1P0C646 297 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 TAL1P17542 331 aaPredicted RBP12.7□□□□□ -0.38
GGA3-213ENST00000582486 PRAMEF18Q5VWM3 479 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 POTEDQ86YR6 584 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 AOPEPQ8N6M6 819 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 SYT17Q9BSW7 474 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 SH2D4AQ9H788 454 aa12.7□□□□□ -0.38
GGA3-213ENST00000582486 TDP2O95551 362 aa12.69□□□□□ -0.38
GGA3-213ENST00000582486 EPS15P42566 896 aa12.69□□□□□ -0.38
GGA3-213ENST00000582486 AFMP43652 599 aa12.69□□□□□ -0.38
GGA3-213ENST00000582486 E2F4Q16254 413 aa12.69□□□□□ -0.38
GGA3-213ENST00000582486 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
GGA3-213ENST00000582486 PAGE5Q96GU1 130 aa12.69□□□□□ -0.38
GGA3-213ENST00000582486 ZNF341Q9BYN7 854 aa12.69□□□□□ -0.38
GGA3-213ENST00000582486 GLT8D2Q9H1C3 349 aa12.69□□□□□ -0.38
GGA3-213ENST00000582486 MEIS2O14770 477 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 SLC37A4O43826 429 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 BMP6P22004 513 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 SARSP49591 514 aaKnown RBP12.68□□□□□ -0.38
GGA3-213ENST00000582486 ORC2Q13416 577 aaPredicted RBP12.68□□□□□ -0.38
GGA3-213ENST00000582486 KARSQ15046 597 aaKnown RBP12.68□□□□□ -0.38
GGA3-213ENST00000582486 NT5DC1Q5TFE4 455 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 SH3RF1Q7Z6J0 888 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 SMARCE1Q969G3 411 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 BPIFA3Q9BQP9 254 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 MAN1B1Q9UKM7 699 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 CTNND1O60716 968 aaKnown RBP12.68□□□□□ -0.38
GGA3-213ENST00000582486 CASP1P29466 404 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 TXLNAP40222 546 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 HIRAP54198 1017 aaPredicted RBP12.68□□□□□ -0.38
GGA3-213ENST00000582486 CHURC1Q8WUH1 139 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 STAMQ92783 540 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 CCDC34Q96HJ3 373 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 FEZ1Q99689 392 aa12.68□□□□□ -0.38
GGA3-213ENST00000582486 DDNO94850 711 aaPredicted RBP12.67□□□□□ -0.38
GGA3-213ENST00000582486 INPP5BP32019 993 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 UBA7P41226 1012 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 TECP42680 631 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 CALCRLQ16602 461 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
GGA3-213ENST00000582486 APOBEC3FQ8IUX4 373 aaKnown RBP12.67□□□□□ -0.38
GGA3-213ENST00000582486 SPATA20Q8TB22 786 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 MTMR9Q96QG7 549 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 FBXO28Q9NVF7 368 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 GGA3Q9NZ52 723 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 DICER1Q9UPY3 1922 aaKnown RBP12.67□□□□□ -0.38
GGA3-213ENST00000582486 SMCHD1A6NHR9 2005 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 TXKP42681 527 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 PPP4R3AQ6IN85 833 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 PDXDC2PQ6P474 469 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 CCDC174Q6PII3 467 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 P2RX7Q99572 595 aaKnown RBP12.67□□□□□ -0.38
GGA3-213ENST00000582486 PYM1Q9BRP8 204 aaKnown RBP12.67□□□□□ -0.38
GGA3-213ENST00000582486 TRIM5Q9C035 493 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 DISC1Q9NRI5 854 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 SBF1O95248 1867 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 ATAD5Q96QE3 1844 aa12.67□□□□□ -0.38
GGA3-213ENST00000582486 OPLAHO14841 1288 aa12.66□□□□□ -0.38
GGA3-213ENST00000582486 PLA2G6O60733 806 aa12.66□□□□□ -0.38
GGA3-213ENST00000582486 PTMAP06454 111 aaKnown RBP12.66□□□□□ -0.38
GGA3-213ENST00000582486 YBX3P16989 372 aaKnown RBP eCLIP12.66□□□□□ -0.38
GGA3-213ENST00000582486 DGKZQ13574 1117 aa12.66□□□□□ -0.38
GGA3-213ENST00000582486 HS1BP3Q53T59 392 aa12.66□□□□□ -0.38
GGA3-213ENST00000582486 DCAF15Q66K64 600 aa12.66□□□□□ -0.38
GGA3-213ENST00000582486 RASSF8Q8NHQ8 419 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms