RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 STAG2Q8N3U4 1231 aa31.35■■■□□ 2.61
LINC00271-207ENST00000580741 CLEC4DQ8WXI8 215 aa31.35■■■□□ 2.61
LINC00271-207ENST00000580741 WDR19Q8NEZ3 1342 aa31.34■■■□□ 2.61
LINC00271-207ENST00000580741 SLC27A2O14975 620 aa31.34■■■□□ 2.61
LINC00271-207ENST00000580741 DHX16O60231 1041 aaKnown RBP31.34■■■□□ 2.61
LINC00271-207ENST00000580741 PGK1P00558 417 aa31.34■■■□□ 2.61
LINC00271-207ENST00000580741 ACVR2BQ13705 512 aa31.34■■■□□ 2.61
LINC00271-207ENST00000580741 BAATQ14032 418 aaPredicted RBP31.34■■■□□ 2.61
LINC00271-207ENST00000580741 CDC37Q16543 378 aaPredicted RBP31.34■■■□□ 2.61
LINC00271-207ENST00000580741 USH1GQ495M9 461 aa31.34■■■□□ 2.61
LINC00271-207ENST00000580741 ERICH2A1L162 156 aa31.33■■■□□ 2.61
LINC00271-207ENST00000580741 KBTBD13C9JR72 458 aa31.33■■■□□ 2.61
LINC00271-207ENST00000580741 CDC45O75419 566 aa31.33■■■□□ 2.61
LINC00271-207ENST00000580741 ATN1P54259 1190 aaPredicted RBP31.33■■■□□ 2.61
LINC00271-207ENST00000580741 WTAPQ15007 396 aa31.33■■■□□ 2.61
LINC00271-207ENST00000580741 VAT1LQ9HCJ6 419 aa31.33■■■□□ 2.61
LINC00271-207ENST00000580741 FAM184BQ9ULE4 1060 aa31.33■■■□□ 2.61
LINC00271-207ENST00000580741 ZMYND8Q9ULU4 1186 aaPredicted RBP31.33■■■□□ 2.61
LINC00271-207ENST00000580741 COLQQ9Y215 455 aaPredicted RBP31.33■■■□□ 2.61
LINC00271-207ENST00000580741 COL9A3Q14050 684 aaPredicted RBP31.32■■■□□ 2.6
LINC00271-207ENST00000580741 TMEM67Q5HYA8 995 aa31.32■■■□□ 2.6
LINC00271-207ENST00000580741 CREB3L3Q68CJ9 461 aa31.32■■■□□ 2.6
LINC00271-207ENST00000580741 CHRDL2Q6WN34 429 aa31.32■■■□□ 2.6
LINC00271-207ENST00000580741 SLC30A10Q6XR72 485 aa31.32■■■□□ 2.6
LINC00271-207ENST00000580741 KATNBL1Q9H079 304 aa31.32■■■□□ 2.6
LINC00271-207ENST00000580741 ABHD16BQ9H3Z7 469 aa31.32■■■□□ 2.6
LINC00271-207ENST00000580741 PTPDC1A2A3K4 754 aa31.31■■■□□ 2.6
LINC00271-207ENST00000580741 JMJD4Q9H9V9 463 aa31.31■■■□□ 2.6
LINC00271-207ENST00000580741 GPHNQ9NQX3 736 aaPredicted RBP31.31■■■□□ 2.6
LINC00271-207ENST00000580741 PCDH10Q9P2E7 1040 aa31.31■■■□□ 2.6
LINC00271-207ENST00000580741 LCTP09848 1927 aa31.3■■■□□ 2.6
LINC00271-207ENST00000580741 ADCY6O43306 1168 aa31.3■■■□□ 2.6
LINC00271-207ENST00000580741 CALML3P27482 149 aa31.3■■■□□ 2.6
LINC00271-207ENST00000580741 SART3Q15020 963 aaKnown RBP31.3■■■□□ 2.6
LINC00271-207ENST00000580741 NECTIN1Q15223 517 aa31.3■■■□□ 2.6
LINC00271-207ENST00000580741 QRICH1Q2TAL8 776 aa31.3■■■□□ 2.6
LINC00271-207ENST00000580741 CCDC144BQ3MJ40 725 aa31.3■■■□□ 2.6
LINC00271-207ENST00000580741 MAD2L2Q9UI95 211 aa31.3■■■□□ 2.6
LINC00271-207ENST00000580741 PNMA2Q9UL42 364 aa31.3■■■□□ 2.6
LINC00271-207ENST00000580741 ASB14A6NK59 587 aa31.29■■■□□ 2.6
LINC00271-207ENST00000580741 KLRF2D3W0D1 207 aa31.29■■■□□ 2.6
LINC00271-207ENST00000580741 SYN1P17600 705 aa31.29■■■□□ 2.6
LINC00271-207ENST00000580741 ADCYAP1R1P41586 468 aa31.29■■■□□ 2.6
LINC00271-207ENST00000580741 FERMT2Q96AC1 680 aa31.29■■■□□ 2.6
LINC00271-207ENST00000580741 SYNRGQ9UMZ2 1314 aa31.28■■■□□ 2.6
LINC00271-207ENST00000580741 CASC1Q6TDU7 716 aa31.28■■■□□ 2.6
LINC00271-207ENST00000580741 RNF207Q6ZRF8 634 aa31.28■■■□□ 2.6
LINC00271-207ENST00000580741 EEPD1Q7L9B9 569 aa31.28■■■□□ 2.6
LINC00271-207ENST00000580741 IGDCC4Q8TDY8 1250 aa31.28■■■□□ 2.6
LINC00271-207ENST00000580741 PALM3A6NDB9 673 aaPredicted RBP31.27■■■□□ 2.6
LINC00271-207ENST00000580741 PRC1O43663 620 aa31.27■■■□□ 2.6
LINC00271-207ENST00000580741 ADAMTS4O75173 837 aa31.27■■■□□ 2.6
LINC00271-207ENST00000580741 IRX5P78411 483 aaPredicted RBP31.27■■■□□ 2.6
LINC00271-207ENST00000580741 GRM4Q14833 912 aa31.27■■■□□ 2.6
LINC00271-207ENST00000580741 RNF180Q86T96 592 aa31.27■■■□□ 2.6
LINC00271-207ENST00000580741 DNAH12Q6ZR08 3092 aa31.26■■■□□ 2.6
LINC00271-207ENST00000580741 ALDH5A1P51649 535 aaPredicted RBP31.26■■■□□ 2.59
LINC00271-207ENST00000580741 RPS6P62753 249 aaKnown RBP31.26■■■□□ 2.59
LINC00271-207ENST00000580741 HABP4Q5JVS0 413 aaKnown RBP31.26■■■□□ 2.59
LINC00271-207ENST00000580741 FBXO16Q8IX29 292 aaPredicted RBP31.26■■■□□ 2.59
LINC00271-207ENST00000580741 C11orf97A0A1B0GVM6 126 aaPredicted RBP31.25■■■□□ 2.59
LINC00271-207ENST00000580741 MYADML2A6NDP7 307 aa31.25■■■□□ 2.59
LINC00271-207ENST00000580741 TROAPQ12815 778 aa31.25■■■□□ 2.59
LINC00271-207ENST00000580741 SLC35G1Q2M3R5 365 aa31.25■■■□□ 2.59
LINC00271-207ENST00000580741 FBXO11Q86XK2 927 aa31.25■■■□□ 2.59
LINC00271-207ENST00000580741 LY9Q9HBG7 655 aa31.25■■■□□ 2.59
LINC00271-207ENST00000580741 ADD3Q9UEY8 706 aaKnown RBP31.25■■■□□ 2.59
LINC00271-207ENST00000580741 ABCB11O95342 1321 aa31.24■■■□□ 2.59
LINC00271-207ENST00000580741 DUSP11O75319 330 aaKnown RBP31.24■■■□□ 2.59
LINC00271-207ENST00000580741 RTP1P59025 263 aa31.24■■■□□ 2.59
LINC00271-207ENST00000580741 CATIPQ7Z7H3 387 aa31.24■■■□□ 2.59
LINC00271-207ENST00000580741 TBC1D5Q92609 795 aa31.24■■■□□ 2.59
LINC00271-207ENST00000580741 MYL10Q9BUA6 226 aa31.24■■■□□ 2.59
LINC00271-207ENST00000580741 PDGFCQ9NRA1 345 aa31.24■■■□□ 2.59
LINC00271-207ENST00000580741 PHF24Q9UPV7 400 aa31.24■■■□□ 2.59
LINC00271-207ENST00000580741 RANBP2P49792 3224 aaKnown RBP31.24■■■□□ 2.59
LINC00271-207ENST00000580741 LRRC37A2A6NM11 1700 aa31.24■■■□□ 2.59
LINC00271-207ENST00000580741 TRIOBPQ9H2D6 2365 aa31.23■■■□□ 2.59
LINC00271-207ENST00000580741 PTGS1P23219 599 aa31.23■■■□□ 2.59
LINC00271-207ENST00000580741 MCM5P33992 734 aa31.23■■■□□ 2.59
LINC00271-207ENST00000580741 SLC39A5Q6ZMH5 540 aa31.23■■■□□ 2.59
LINC00271-207ENST00000580741 NUP133Q8WUM0 1156 aa31.23■■■□□ 2.59
LINC00271-207ENST00000580741 RBM27Q9P2N5 1060 aaKnown RBP31.23■■■□□ 2.59
LINC00271-207ENST00000580741 ATP11BQ9Y2G3 1177 aa31.23■■■□□ 2.59
LINC00271-207ENST00000580741 HOMER1Q86YM7 354 aa31.22■■■□□ 2.59
LINC00271-207ENST00000580741 MORC4Q8TE76 937 aa31.22■■■□□ 2.59
LINC00271-207ENST00000580741 LRRC2Q9BYS8 371 aa31.22■■■□□ 2.59
LINC00271-207ENST00000580741 SH2B2O14492 632 aaPredicted RBP31.21■■■□□ 2.59
LINC00271-207ENST00000580741 PPP1R11O60927 126 aaPredicted RBP31.21■■■□□ 2.59
LINC00271-207ENST00000580741 C6orf222P0C671 652 aaPredicted RBP31.21■■■□□ 2.59
LINC00271-207ENST00000580741 TNFAIP2Q03169 654 aa31.21■■■□□ 2.59
LINC00271-207ENST00000580741 NOL8Q76FK4 1167 aaKnown RBP31.21■■■□□ 2.59
LINC00271-207ENST00000580741 ZNF654Q8IZM8 581 aa31.21■■■□□ 2.59
LINC00271-207ENST00000580741 KLHDC9Q8NEP7 349 aa31.21■■■□□ 2.59
LINC00271-207ENST00000580741 MTMR8Q96EF0 704 aa31.21■■■□□ 2.59
LINC00271-207ENST00000580741 TRIM60Q495X7 471 aa31.2■■■□□ 2.59
LINC00271-207ENST00000580741 TMEM63BQ5T3F8 832 aa31.2■■■□□ 2.59
LINC00271-207ENST00000580741 RNF20Q5VTR2 975 aa31.2■■■□□ 2.59
LINC00271-207ENST00000580741 TAPT1Q6NXT6 567 aa31.2■■■□□ 2.59
LINC00271-207ENST00000580741 NFXL1Q6ZNB6 911 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms