RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 PALM3A6NDB9 673 aaPredicted RBP18.85■□□□□ 0.61
NDE1-205ENST00000572756 EVI5O60447 810 aa18.85■□□□□ 0.61
NDE1-205ENST00000572756 AKR1A1P14550 325 aa18.85■□□□□ 0.61
NDE1-205ENST00000572756 ACVR2BQ13705 512 aa18.85■□□□□ 0.61
NDE1-205ENST00000572756 WTAPQ15007 396 aa18.85■□□□□ 0.61
NDE1-205ENST00000572756 SART3Q15020 963 aaKnown RBP18.85■□□□□ 0.61
NDE1-205ENST00000572756 CDC37Q16543 378 aaPredicted RBP18.85■□□□□ 0.61
NDE1-205ENST00000572756 NSMFQ6X4W1 530 aa18.85■□□□□ 0.61
NDE1-205ENST00000572756 ARRDC4Q8NCT1 418 aa18.85■□□□□ 0.61
NDE1-205ENST00000572756 MTA3Q9BTC8 594 aa18.85■□□□□ 0.61
NDE1-205ENST00000572756 ABHD16BQ9H3Z7 469 aa18.85■□□□□ 0.61
NDE1-205ENST00000572756 ERICH2A1L162 156 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 RARBP10826 455 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 TROAPQ12815 778 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 BAATQ14032 418 aaPredicted RBP18.84■□□□□ 0.61
NDE1-205ENST00000572756 GRM4Q14833 912 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 LRRC41Q15345 812 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 TMEM67Q5HYA8 995 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 GJC2Q5T442 439 aaPredicted RBP18.84■□□□□ 0.61
NDE1-205ENST00000572756 ERICH6BQ5W0A0 696 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 CASC1Q6TDU7 716 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 LENG1Q96BZ8 264 aaPredicted RBP18.84■□□□□ 0.61
NDE1-205ENST00000572756 MTMR8Q96EF0 704 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 JMJD4Q9H9V9 463 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 NR2E3Q9Y5X4 410 aa18.84■□□□□ 0.61
NDE1-205ENST00000572756 ASB14A6NK59 587 aa18.83■□□□□ 0.6
NDE1-205ENST00000572756 KLRF2D3W0D1 207 aa18.83■□□□□ 0.6
NDE1-205ENST00000572756 LRRC26Q2I0M4 334 aa18.83■□□□□ 0.6
NDE1-205ENST00000572756 SLC35G1Q2M3R5 365 aa18.83■□□□□ 0.6
NDE1-205ENST00000572756 QRICH1Q2TAL8 776 aa18.83■□□□□ 0.6
NDE1-205ENST00000572756 SLC30A10Q6XR72 485 aa18.83■□□□□ 0.6
NDE1-205ENST00000572756 MORC4Q8TE76 937 aa18.83■□□□□ 0.6
NDE1-205ENST00000572756 PURBQ96QR8 312 aaKnown RBP18.83■□□□□ 0.6
NDE1-205ENST00000572756 LY9Q9HBG7 655 aa18.83■□□□□ 0.6
NDE1-205ENST00000572756 XPNPEP3Q9NQH7 507 aa18.83■□□□□ 0.6
NDE1-205ENST00000572756 ZHX1Q9UKY1 873 aaPredicted RBP18.83■□□□□ 0.6
NDE1-205ENST00000572756 FAM184BQ9ULE4 1060 aa18.83■□□□□ 0.6
NDE1-205ENST00000572756 KBTBD13C9JR72 458 aa18.82■□□□□ 0.6
NDE1-205ENST00000572756 ADCY6O43306 1168 aa18.82■□□□□ 0.6
NDE1-205ENST00000572756 PRC1O43663 620 aa18.82■□□□□ 0.6
NDE1-205ENST00000572756 ADAMTS4O75173 837 aa18.82■□□□□ 0.6
NDE1-205ENST00000572756 MCM5P33992 734 aa18.82■□□□□ 0.6
NDE1-205ENST00000572756 USH1GQ495M9 461 aa18.82■□□□□ 0.6
NDE1-205ENST00000572756 RGS22Q8NE09 1264 aa18.82■□□□□ 0.6
NDE1-205ENST00000572756 SENP6Q9GZR1 1112 aaPredicted RBP18.82■□□□□ 0.6
NDE1-205ENST00000572756 GPHNQ9NQX3 736 aaPredicted RBP18.82■□□□□ 0.6
NDE1-205ENST00000572756 PPP4R2Q9NY27 417 aa18.82■□□□□ 0.6
NDE1-205ENST00000572756 DDX49Q9Y6V7 483 aaKnown RBP18.82■□□□□ 0.6
NDE1-205ENST00000572756 ABCB11O95342 1321 aa18.81■□□□□ 0.6
NDE1-205ENST00000572756 LOC102724159A0A0B4J2E5 919 aa18.81■□□□□ 0.6
NDE1-205ENST00000572756 DUSP11O75319 330 aaKnown RBP18.81■□□□□ 0.6
NDE1-205ENST00000572756 PGK1P00558 417 aa18.81■□□□□ 0.6
NDE1-205ENST00000572756 PWP2Q15269 919 aaKnown RBP18.81■□□□□ 0.6
NDE1-205ENST00000572756 CCDC144BQ3MJ40 725 aa18.81■□□□□ 0.6
NDE1-205ENST00000572756 RNF207Q6ZRF8 634 aa18.81■□□□□ 0.6
NDE1-205ENST00000572756 C7orf61Q8IZ16 206 aa18.81■□□□□ 0.6
NDE1-205ENST00000572756 MAF1Q9H063 256 aa18.81■□□□□ 0.6
NDE1-205ENST00000572756 RANBP2P49792 3224 aaKnown RBP18.81■□□□□ 0.6
NDE1-205ENST00000572756 SYNRGQ9UMZ2 1314 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 PTPDC1A2A3K4 754 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 SH2B2O14492 632 aaPredicted RBP18.8■□□□□ 0.6
NDE1-205ENST00000572756 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
NDE1-205ENST00000572756 ALDH5A1P51649 535 aaPredicted RBP18.8■□□□□ 0.6
NDE1-205ENST00000572756 RPS6P62753 249 aaKnown RBP18.8■□□□□ 0.6
NDE1-205ENST00000572756 TSGA10IPQ3SY00 556 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 RNF20Q5VTR2 975 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 CATIPQ7Z7H3 387 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 FBXO11Q86XK2 927 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 KLHDC9Q8NEP7 349 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 TMEM87BQ96K49 555 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 MAP3K14Q99558 947 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 RIOX1Q9H6W3 641 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 VAT1LQ9HCJ6 419 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 PHF24Q9UPV7 400 aa18.8■□□□□ 0.6
NDE1-205ENST00000572756 CYTH3O43739 400 aa18.79■□□□□ 0.6
NDE1-205ENST00000572756 DHX16O60231 1041 aaKnown RBP18.79■□□□□ 0.6
NDE1-205ENST00000572756 PPP1R11O60927 126 aaPredicted RBP18.79■□□□□ 0.6
NDE1-205ENST00000572756 LIFRP42702 1097 aa18.79■□□□□ 0.6
NDE1-205ENST00000572756 CCSAPQ6IQ19 270 aaPredicted RBP18.79■□□□□ 0.6
NDE1-205ENST00000572756 RNF180Q86T96 592 aa18.79■□□□□ 0.6
NDE1-205ENST00000572756 RASEFQ8IZ41 740 aa18.79■□□□□ 0.6
NDE1-205ENST00000572756 ZNF654Q8IZM8 581 aa18.79■□□□□ 0.6
NDE1-205ENST00000572756 UPF3AQ9H1J1 476 aaKnown RBP18.79■□□□□ 0.6
NDE1-205ENST00000572756 PRO3102Q9H379 93 aa18.79■□□□□ 0.6
NDE1-205ENST00000572756 ADD3Q9UEY8 706 aaKnown RBP18.79■□□□□ 0.6
NDE1-205ENST00000572756 TRIOBPQ9H2D6 2365 aa18.79■□□□□ 0.6
NDE1-205ENST00000572756 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.78■□□□□ 0.6
NDE1-205ENST00000572756 ZBTB5O15062 677 aa18.78■□□□□ 0.6
NDE1-205ENST00000572756 DDAH1O94760 285 aa18.78■□□□□ 0.6
NDE1-205ENST00000572756 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
NDE1-205ENST00000572756 EDNRBP24530 442 aa18.78■□□□□ 0.6
NDE1-205ENST00000572756 CALML3P27482 149 aa18.78■□□□□ 0.6
NDE1-205ENST00000572756 CST5P28325 142 aaPredicted RBP18.78■□□□□ 0.6
NDE1-205ENST00000572756 ADCYAP1R1P41586 468 aa18.78■□□□□ 0.6
NDE1-205ENST00000572756 NKX3-2P78367 333 aa18.78■□□□□ 0.6
NDE1-205ENST00000572756 SNX17Q15036 470 aa18.78■□□□□ 0.6
NDE1-205ENST00000572756 TAPT1Q6NXT6 567 aa18.78■□□□□ 0.6
NDE1-205ENST00000572756 SLC39A5Q6ZMH5 540 aa18.78■□□□□ 0.6
NDE1-205ENST00000572756 DNERQ8NFT8 737 aa18.78■□□□□ 0.6
NDE1-205ENST00000572756 TBC1D5Q92609 795 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms