RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PXYLP1Q8TE99 480 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 JMJD4Q9H9V9 463 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 VAT1LQ9HCJ6 419 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 BIN2Q9UBW5 565 aaPredicted RBP18.4■□□□□ 0.54
CHD3-215ENST00000572750 BRPF3Q9ULD4 1205 aa18.4■□□□□ 0.54
CHD3-215ENST00000572750 KLF18A0A0U1RQI7 1052 aa18.39■□□□□ 0.53
CHD3-215ENST00000572750 HMGCRP04035 888 aa18.39■□□□□ 0.53
CHD3-215ENST00000572750 XRCC5P13010 732 aaKnown RBP18.39■□□□□ 0.53
CHD3-215ENST00000572750 USH1GQ495M9 461 aa18.39■□□□□ 0.53
CHD3-215ENST00000572750 MUM1L1Q5H9M0 696 aa18.39■□□□□ 0.53
CHD3-215ENST00000572750 DPP9Q86TI2 863 aa18.39■□□□□ 0.53
CHD3-215ENST00000572750 CHST13Q8NET6 341 aa18.39■□□□□ 0.53
CHD3-215ENST00000572750 TRERF1Q96PN7 1200 aa18.39■□□□□ 0.53
CHD3-215ENST00000572750 ACAD9Q9H845 621 aa18.39■□□□□ 0.53
CHD3-215ENST00000572750 FLRT1Q9NZU1 646 aa18.39■□□□□ 0.53
CHD3-215ENST00000572750 CYTH3O43739 400 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 EIF5BO60841 1220 aaKnown RBP18.38■□□□□ 0.53
CHD3-215ENST00000572750 PLEKHA8P1O95397 391 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 HOXC6P09630 235 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 KIF5BP33176 963 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 APOBRQ0VD83 1088 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 QRICH1Q2TAL8 776 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 Q7L0L9 218 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 HOMER1Q86YM7 354 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 BRF1Q92994 677 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 MAP3K14Q99558 947 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 ZSWIM6Q9HCJ5 1215 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 FBXO40Q9UH90 709 aa18.38■□□□□ 0.53
CHD3-215ENST00000572750 NAP1L2Q9ULW6 460 aaPredicted RBP18.38■□□□□ 0.53
CHD3-215ENST00000572750 LRRC37A2A6NM11 1700 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 GOLGA8BA8MQT2 603 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 NFIBO00712 420 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 CALM1P0DP23 149 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 CALM2P0DP24 149 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 CALM3P0DP25 149 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 TKFCQ3LXA3 575 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.37■□□□□ 0.53
CHD3-215ENST00000572750 CMTR1Q8N1G2 835 aaKnown RBP18.37■□□□□ 0.53
CHD3-215ENST00000572750 ANKRD35Q8N283 1001 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 PIBF1Q8WXW3 757 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 TM6SF1Q9BZW5 370 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 A1CFQ9NQ94 594 aaKnown RBP18.37■□□□□ 0.53
CHD3-215ENST00000572750 CYP46A1Q9Y6A2 500 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 FRMPD3Q5JV73 1810 aa18.37■□□□□ 0.53
CHD3-215ENST00000572750 A0A1W2PPC1 479 aa18.36■□□□□ 0.53
CHD3-215ENST00000572750 ZBTB43O43298 467 aa18.36■□□□□ 0.53
CHD3-215ENST00000572750 MCM3APO60318 1980 aa18.36■□□□□ 0.53
CHD3-215ENST00000572750 PPP1R11O60927 126 aaPredicted RBP18.36■□□□□ 0.53
CHD3-215ENST00000572750 ANAPC15P60006 121 aa18.36■□□□□ 0.53
CHD3-215ENST00000572750 UBXN2AP68543 259 aa18.36■□□□□ 0.53
CHD3-215ENST00000572750 SYNE3Q6ZMZ3 975 aa18.36■□□□□ 0.53
CHD3-215ENST00000572750 MTMR8Q96EF0 704 aa18.36■□□□□ 0.53
CHD3-215ENST00000572750 DDX11Q96FC9 970 aa18.36■□□□□ 0.53
CHD3-215ENST00000572750 PIGSQ96S52 555 aa18.36■□□□□ 0.53
CHD3-215ENST00000572750 RIOX1Q9H6W3 641 aa18.36■□□□□ 0.53
CHD3-215ENST00000572750 DNAJC25-GNG10A0A024R161 153 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 GOLGA8AA7E2F4 631 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 ZBTB5O15062 677 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 CCL5P13501 91 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
CHD3-215ENST00000572750 NSMFQ6X4W1 530 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 TMTC3Q6ZXV5 915 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 TRMT44Q8IYL2 757 aaKnown RBP18.35■□□□□ 0.53
CHD3-215ENST00000572750 FANCBQ8NB91 859 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 CLEC4DQ8WXI8 215 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 MAML3Q96JK9 1138 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 SPZ1Q9BXG8 430 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 AGXT2Q9BYV1 514 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 UNC93B1Q9H1C4 597 aa18.35■□□□□ 0.53
CHD3-215ENST00000572750 PFASO15067 1338 aa18.34■□□□□ 0.53
CHD3-215ENST00000572750 CYP2C19P33261 490 aa18.34■□□□□ 0.53
CHD3-215ENST00000572750 TOB2Q14106 344 aaPredicted RBP18.34■□□□□ 0.53
CHD3-215ENST00000572750 RTN1Q16799 776 aa18.34■□□□□ 0.53
CHD3-215ENST00000572750 ZNF792Q3KQV3 632 aa18.34■□□□□ 0.53
CHD3-215ENST00000572750 OLFML2BQ68BL8 750 aa18.34■□□□□ 0.53
CHD3-215ENST00000572750 SLC30A10Q6XR72 485 aa18.34■□□□□ 0.53
CHD3-215ENST00000572750 FBXO11Q86XK2 927 aa18.34■□□□□ 0.53
CHD3-215ENST00000572750 SRBD1Q8N5C6 995 aaKnown RBP18.34■□□□□ 0.53
CHD3-215ENST00000572750 DEFB123Q8N688 67 aa18.34■□□□□ 0.53
CHD3-215ENST00000572750 SLC5A4Q9NY91 659 aa18.34■□□□□ 0.53
CHD3-215ENST00000572750 PNMA2Q9UL42 364 aa18.34■□□□□ 0.53
CHD3-215ENST00000572750 NID2Q14112 1375 aa18.33■□□□□ 0.53
CHD3-215ENST00000572750 ABCB11O95342 1321 aa18.33■□□□□ 0.53
CHD3-215ENST00000572750 CNTNAP5Q8WYK1 1306 aa18.33■□□□□ 0.53
CHD3-215ENST00000572750 GJA8P48165 433 aa18.33■□□□□ 0.52
CHD3-215ENST00000572750 GNAQP50148 359 aa18.33■□□□□ 0.52
CHD3-215ENST00000572750 CNTN2Q02246 1040 aa18.33■□□□□ 0.52
CHD3-215ENST00000572750 CACNB2Q08289 660 aaPredicted RBP18.33■□□□□ 0.52
CHD3-215ENST00000572750 MAP3K21Q5TCX8 1036 aa18.33■□□□□ 0.52
CHD3-215ENST00000572750 FBXL16Q8N461 479 aa18.33■□□□□ 0.52
CHD3-215ENST00000572750 CCDC82Q8N4S0 544 aa18.33■□□□□ 0.52
CHD3-215ENST00000572750 FGD4Q96M96 766 aa18.33■□□□□ 0.52
CHD3-215ENST00000572750 LARP6Q9BRS8 491 aaKnown RBP18.33■□□□□ 0.52
CHD3-215ENST00000572750 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
CHD3-215ENST00000572750 CYP39A1Q9NYL5 469 aa18.33■□□□□ 0.52
CHD3-215ENST00000572750 STXBP5LQ9Y2K9 1186 aa18.33■□□□□ 0.52
CHD3-215ENST00000572750 ASTN1O14525 1302 aa18.32■□□□□ 0.52
CHD3-215ENST00000572750 hCG_1642624A0A1W2PR95 340 aa18.32■□□□□ 0.52
CHD3-215ENST00000572750 PTPDC1A2A3K4 754 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms