RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 ASTN1O14525 1302 aa35.54■■■■□ 3.28
CTDNEP1-206ENST00000571409 NFIBO00712 420 aa35.53■■■■□ 3.28
CTDNEP1-206ENST00000571409 ADCY6O43306 1168 aa35.53■■■■□ 3.28
CTDNEP1-206ENST00000571409 SNX17Q15036 470 aa35.53■■■■□ 3.28
CTDNEP1-206ENST00000571409 UBA5Q9GZZ9 404 aa35.53■■■■□ 3.28
CTDNEP1-206ENST00000571409 CPVLQ9H3G5 476 aa35.53■■■■□ 3.28
CTDNEP1-206ENST00000571409 PNMA2Q9UL42 364 aa35.53■■■■□ 3.28
CTDNEP1-206ENST00000571409 U3KPZ7 1027 aaPredicted RBP35.53■■■■□ 3.28
CTDNEP1-206ENST00000571409 RANBP2P49792 3224 aaKnown RBP35.53■■■■□ 3.28
CTDNEP1-206ENST00000571409 CYP21A2P08686 494 aa35.52■■■■□ 3.28
CTDNEP1-206ENST00000571409 WDR19Q8NEZ3 1342 aa35.52■■■■□ 3.28
CTDNEP1-206ENST00000571409 LRRC37A2A6NM11 1700 aa35.52■■■■□ 3.28
CTDNEP1-206ENST00000571409 TRDNQ13061 729 aa35.51■■■■□ 3.28
CTDNEP1-206ENST00000571409 BAATQ14032 418 aaPredicted RBP35.51■■■■□ 3.28
CTDNEP1-206ENST00000571409 TRIM60Q495X7 471 aa35.51■■■■□ 3.28
CTDNEP1-206ENST00000571409 CYB5R4Q7L1T6 521 aa35.51■■■■□ 3.28
CTDNEP1-206ENST00000571409 PURBQ96QR8 312 aaKnown RBP35.51■■■■□ 3.28
CTDNEP1-206ENST00000571409 DDX49Q9Y6V7 483 aaKnown RBP35.51■■■■□ 3.28
CTDNEP1-206ENST00000571409 A0A1W2PQ45 241 aaPredicted RBP35.5■■■■□ 3.27
CTDNEP1-206ENST00000571409 A0A1W2PQY0 241 aa35.5■■■■□ 3.27
CTDNEP1-206ENST00000571409 ASPRV1Q53RT3 343 aa35.5■■■■□ 3.27
CTDNEP1-206ENST00000571409 IFIT1BQ5T764 474 aaKnown RBP35.5■■■■□ 3.27
CTDNEP1-206ENST00000571409 KLHDC9Q8NEP7 349 aa35.5■■■■□ 3.27
CTDNEP1-206ENST00000571409 TSEN34Q9BSV6 310 aaKnown RBP35.5■■■■□ 3.27
CTDNEP1-206ENST00000571409 PRKAG2Q9UGJ0 569 aa35.5■■■■□ 3.27
CTDNEP1-206ENST00000571409 PTPDC1A2A3K4 754 aa35.49■■■■□ 3.27
CTDNEP1-206ENST00000571409 MDM2Q00987 491 aaPredicted RBP35.49■■■■□ 3.27
CTDNEP1-206ENST00000571409 C1orf53Q5VUE5 145 aa35.49■■■■□ 3.27
CTDNEP1-206ENST00000571409 CLEC4DQ8WXI8 215 aa35.49■■■■□ 3.27
CTDNEP1-206ENST00000571409 MYADML2A6NDP7 307 aa35.48■■■■□ 3.27
CTDNEP1-206ENST00000571409 C6orf222P0C671 652 aaPredicted RBP35.48■■■■□ 3.27
CTDNEP1-206ENST00000571409 UBE2OQ9C0C9 1292 aaKnown RBP35.48■■■■□ 3.27
CTDNEP1-206ENST00000571409 SPC25Q9HBM1 224 aa35.48■■■■□ 3.27
CTDNEP1-206ENST00000571409 PARP1P09874 1014 aaKnown RBP35.47■■■■□ 3.27
CTDNEP1-206ENST00000571409 ACLYP53396 1101 aa35.47■■■■□ 3.27
CTDNEP1-206ENST00000571409 IRX5P78411 483 aaPredicted RBP35.47■■■■□ 3.27
CTDNEP1-206ENST00000571409 SEC23AQ15436 765 aa35.47■■■■□ 3.27
CTDNEP1-206ENST00000571409 KCNA10Q16322 511 aa35.47■■■■□ 3.27
CTDNEP1-206ENST00000571409 SLC30A10Q6XR72 485 aa35.47■■■■□ 3.27
CTDNEP1-206ENST00000571409 ADD3Q9UEY8 706 aaKnown RBP35.47■■■■□ 3.27
CTDNEP1-206ENST00000571409 C11orf97A0A1B0GVM6 126 aaPredicted RBP35.46■■■■□ 3.27
CTDNEP1-206ENST00000571409 CST5P28325 142 aaPredicted RBP35.46■■■■□ 3.27
CTDNEP1-206ENST00000571409 GJA9P57773 515 aa35.46■■■■□ 3.27
CTDNEP1-206ENST00000571409 TNFAIP2Q03169 654 aa35.46■■■■□ 3.27
CTDNEP1-206ENST00000571409 USH1GQ495M9 461 aa35.46■■■■□ 3.27
CTDNEP1-206ENST00000571409 CCSAPQ6IQ19 270 aaPredicted RBP35.46■■■■□ 3.27
CTDNEP1-206ENST00000571409 CENPQQ7L2Z9 268 aaPredicted RBP35.46■■■■□ 3.27
CTDNEP1-206ENST00000571409 ADGRF4Q8IZF3 695 aa35.46■■■■□ 3.27
CTDNEP1-206ENST00000571409 UPF3AQ9H1J1 476 aaKnown RBP35.46■■■■□ 3.27
CTDNEP1-206ENST00000571409 TAF6LQ9Y6J9 622 aa35.46■■■■□ 3.27
CTDNEP1-206ENST00000571409 MOXD2PA6NHM9 499 aa35.45■■■■□ 3.27
CTDNEP1-206ENST00000571409 CALML3P27482 149 aa35.45■■■■□ 3.27
CTDNEP1-206ENST00000571409 CDC37Q16543 378 aaPredicted RBP35.45■■■■□ 3.27
CTDNEP1-206ENST00000571409 RNF207Q6ZRF8 634 aa35.45■■■■□ 3.27
CTDNEP1-206ENST00000571409 EEPD1Q7L9B9 569 aa35.45■■■■□ 3.27
CTDNEP1-206ENST00000571409 FBXO16Q8IX29 292 aaPredicted RBP35.45■■■■□ 3.27
CTDNEP1-206ENST00000571409 MAP4K1Q92918 833 aa35.45■■■■□ 3.27
CTDNEP1-206ENST00000571409 LBHD1Q9BQE6 289 aaPredicted RBP35.45■■■■□ 3.27
CTDNEP1-206ENST00000571409 PRDM5Q9NQX1 630 aaPredicted RBP35.45■■■■□ 3.27
CTDNEP1-206ENST00000571409 E7EWF7 191 aa35.44■■■■□ 3.26
CTDNEP1-206ENST00000571409 ALDH5A1P51649 535 aaPredicted RBP35.44■■■■□ 3.26
CTDNEP1-206ENST00000571409 NOL8Q76FK4 1167 aaKnown RBP35.44■■■■□ 3.26
CTDNEP1-206ENST00000571409 RALYLQ86SE5 291 aaKnown RBP35.44■■■■□ 3.26
CTDNEP1-206ENST00000571409 MORC4Q8TE76 937 aa35.44■■■■□ 3.26
CTDNEP1-206ENST00000571409 NUP133Q8WUM0 1156 aa35.44■■■■□ 3.26
CTDNEP1-206ENST00000571409 STARD7Q9NQZ5 370 aa35.44■■■■□ 3.26
CTDNEP1-206ENST00000571409 LTBP2Q14767 1821 aa35.43■■■■□ 3.26
CTDNEP1-206ENST00000571409 TLE2Q04725 743 aa35.43■■■■□ 3.26
CTDNEP1-206ENST00000571409 TDHQ8IZJ6 230 aa35.43■■■■□ 3.26
CTDNEP1-206ENST00000571409 PCSK9Q8NBP7 692 aaKnown RBP35.43■■■■□ 3.26
CTDNEP1-206ENST00000571409 DHX16O60231 1041 aaKnown RBP35.42■■■■□ 3.26
CTDNEP1-206ENST00000571409 RPS6P62753 249 aaKnown RBP35.42■■■■□ 3.26
CTDNEP1-206ENST00000571409 NCOA7Q8NI08 942 aa35.42■■■■□ 3.26
CTDNEP1-206ENST00000571409 VTA1Q9NP79 307 aa35.42■■■■□ 3.26
CTDNEP1-206ENST00000571409 PDLIM7Q9NR12 457 aa35.42■■■■□ 3.26
CTDNEP1-206ENST00000571409 PDGFCQ9NRA1 345 aa35.42■■■■□ 3.26
CTDNEP1-206ENST00000571409 RBM8AQ9Y5S9 174 aaKnown RBP35.42■■■■□ 3.26
CTDNEP1-206ENST00000571409 ASGR1P07306 291 aa35.41■■■■□ 3.26
CTDNEP1-206ENST00000571409 GNASQ5JWF2 1037 aa35.41■■■■□ 3.26
CTDNEP1-206ENST00000571409 TAPT1Q6NXT6 567 aa35.41■■■■□ 3.26
CTDNEP1-206ENST00000571409 STOX1Q6ZVD7 989 aa35.41■■■■□ 3.26
CTDNEP1-206ENST00000571409 SKAP1Q86WV1 359 aa35.41■■■■□ 3.26
CTDNEP1-206ENST00000571409 STAG2Q8N3U4 1231 aa35.41■■■■□ 3.26
CTDNEP1-206ENST00000571409 VAT1LQ9HCJ6 419 aa35.41■■■■□ 3.26
CTDNEP1-206ENST00000571409 GNEQ9Y223 722 aaKnown RBP35.41■■■■□ 3.26
CTDNEP1-206ENST00000571409 LOC102724159A0A0B4J2E5 919 aa35.4■■■■□ 3.26
CTDNEP1-206ENST00000571409 SOX1O00570 391 aaPredicted RBP35.4■■■■□ 3.26
CTDNEP1-206ENST00000571409 IFIT3O14879 490 aaKnown RBP35.4■■■■□ 3.26
CTDNEP1-206ENST00000571409 PWP2Q15269 919 aaKnown RBP35.4■■■■□ 3.26
CTDNEP1-206ENST00000571409 QRICH1Q2TAL8 776 aa35.4■■■■□ 3.26
CTDNEP1-206ENST00000571409 KIAA1211Q6ZU35 1233 aa35.4■■■■□ 3.26
CTDNEP1-206ENST00000571409 JMJD4Q9H9V9 463 aa35.4■■■■□ 3.26
CTDNEP1-206ENST00000571409 ABCB11O95342 1321 aa35.39■■■■□ 3.26
CTDNEP1-206ENST00000571409 ERICH2A1L162 156 aa35.39■■■■□ 3.26
CTDNEP1-206ENST00000571409 CTAGE5O15320 804 aa35.39■■■■□ 3.26
CTDNEP1-206ENST00000571409 SMPD1P17405 629 aa35.39■■■■□ 3.26
CTDNEP1-206ENST00000571409 IQSEC1Q6DN90 963 aa35.39■■■■□ 3.26
CTDNEP1-206ENST00000571409 SH3RF1Q7Z6J0 888 aa35.39■■■■□ 3.26
CTDNEP1-206ENST00000571409 TLK2Q86UE8 772 aa35.39■■■■□ 3.26
CTDNEP1-206ENST00000571409 GLT1D1Q96MS3 346 aa35.39■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms