RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-215	ENST00000569189	NECTIN1	Q15223	517 aa		28.4	■■■□□ 2.14
GGA2-215	ENST00000569189	GJC2	Q5T442	439 aa	Predicted RBP	28.4	■■■□□ 2.14
GGA2-215	ENST00000569189	CREB3L3	Q68CJ9	461 aa		28.4	■■■□□ 2.14
GGA2-215	ENST00000569189	CCDC144CP	Q8IYA2	1237 aa		28.4	■■■□□ 2.14
GGA2-215	ENST00000569189	ABHD16B	Q9H3Z7	469 aa		28.4	■■■□□ 2.14
GGA2-215	ENST00000569189	KBTBD13	C9JR72	458 aa		28.39	■■■□□ 2.14
GGA2-215	ENST00000569189	DHX16	O60231	1041 aa	Known RBP	28.39	■■■□□ 2.14
GGA2-215	ENST00000569189	CENPB	P07199	599 aa	Predicted RBP	28.39	■■■□□ 2.14
GGA2-215	ENST00000569189	ACVR2B	Q13705	512 aa		28.39	■■■□□ 2.14
GGA2-215	ENST00000569189	TMEM67	Q5HYA8	995 aa		28.39	■■■□□ 2.14
GGA2-215	ENST00000569189	CLEC4D	Q8WXI8	215 aa		28.39	■■■□□ 2.14
GGA2-215	ENST00000569189	SENP2	Q9HC62	589 aa		28.39	■■■□□ 2.14
GGA2-215	ENST00000569189	XPNPEP3	Q9NQH7	507 aa		28.39	■■■□□ 2.14
GGA2-215	ENST00000569189	ASB14	A6NK59	587 aa		28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	MYCN	P04198	464 aa	Predicted RBP	28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	BAAT	Q14032	418 aa	Predicted RBP	28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	LRRC41	Q15345	812 aa		28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	USH1G	Q495M9	461 aa		28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	STAG2	Q8N3U4	1231 aa		28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	SENP6	Q9GZR1	1112 aa	Predicted RBP	28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	MAD2L2	Q9UI95	211 aa		28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	FAM184B	Q9ULE4	1060 aa		28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	BAZ2B	Q9UIF8	2168 aa	Known RBP	28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	ASTN1	O14525	1302 aa		28.38	■■■□□ 2.13
GGA2-215	ENST00000569189	PTPDC1	A2A3K4	754 aa		28.37	■■■□□ 2.13
GGA2-215	ENST00000569189	IGDCC4	Q8TDY8	1250 aa		28.37	■■■□□ 2.13
GGA2-215	ENST00000569189	LENG1	Q96BZ8	264 aa	Predicted RBP	28.37	■■■□□ 2.13
GGA2-215	ENST00000569189	JMJD4	Q9H9V9	463 aa		28.37	■■■□□ 2.13
GGA2-215	ENST00000569189	KLRF2	D3W0D1	207 aa		28.36	■■■□□ 2.13
GGA2-215	ENST00000569189	GRM4	Q14833	912 aa		28.36	■■■□□ 2.13
GGA2-215	ENST00000569189	QRICH1	Q2TAL8	776 aa		28.36	■■■□□ 2.13
GGA2-215	ENST00000569189	RNF207	Q6ZRF8	634 aa		28.36	■■■□□ 2.13
GGA2-215	ENST00000569189	C7orf61	Q8IZ16	206 aa		28.36	■■■□□ 2.13
GGA2-215	ENST00000569189	KATNBL1	Q9H079	304 aa		28.36	■■■□□ 2.13
GGA2-215	ENST00000569189	VAT1L	Q9HCJ6	419 aa		28.36	■■■□□ 2.13
GGA2-215	ENST00000569189	PALM3	A6NDB9	673 aa	Predicted RBP	28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	PRC1	O43663	620 aa		28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	PGK1	P00558	417 aa		28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	MCM5	P33992	734 aa		28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	LRRC26	Q2I0M4	334 aa		28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	CCDC144B	Q3MJ40	725 aa		28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	RNF20	Q5VTR2	975 aa		28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	SLC30A10	Q6XR72	485 aa		28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	PURB	Q96QR8	312 aa	Known RBP	28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	MTA3	Q9BTC8	594 aa		28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	ADD3	Q9UEY8	706 aa	Known RBP	28.35	■■■□□ 2.13
GGA2-215	ENST00000569189	TROAP	Q12815	778 aa		28.34	■■■□□ 2.13
GGA2-215	ENST00000569189	ERICH6B	Q5W0A0	696 aa		28.34	■■■□□ 2.13
GGA2-215	ENST00000569189	CATIP	Q7Z7H3	387 aa		28.34	■■■□□ 2.13
GGA2-215	ENST00000569189	RNF180	Q86T96	592 aa		28.34	■■■□□ 2.13
GGA2-215	ENST00000569189	LY9	Q9HBG7	655 aa		28.34	■■■□□ 2.13
GGA2-215	ENST00000569189	PPP4R2	Q9NY27	417 aa		28.34	■■■□□ 2.13
GGA2-215	ENST00000569189	ABCB11	O95342	1321 aa		28.34	■■■□□ 2.13
GGA2-215	ENST00000569189	CALML3	P27482	149 aa		28.33	■■■□□ 2.13
GGA2-215	ENST00000569189	RPS6	P62753	249 aa	Known RBP	28.33	■■■□□ 2.13
GGA2-215	ENST00000569189	FBXO11	Q86XK2	927 aa		28.33	■■■□□ 2.13
GGA2-215	ENST00000569189	DDX49	Q9Y6V7	483 aa	Known RBP	28.33	■■■□□ 2.13
GGA2-215	ENST00000569189	SYNRG	Q9UMZ2	1314 aa		28.33	■■■□□ 2.13
GGA2-215	ENST00000569189	ADCY6	O43306	1168 aa		28.32	■■■□□ 2.12
GGA2-215	ENST00000569189	ADAMTS4	O75173	837 aa		28.32	■■■□□ 2.12
GGA2-215	ENST00000569189	DUSP11	O75319	330 aa	Known RBP	28.32	■■■□□ 2.12
GGA2-215	ENST00000569189	ALDH5A1	P51649	535 aa	Predicted RBP	28.32	■■■□□ 2.12
GGA2-215	ENST00000569189	MORC4	Q8TE76	937 aa		28.32	■■■□□ 2.12
GGA2-215	ENST00000569189	TMEM87B	Q96K49	555 aa		28.32	■■■□□ 2.12
GGA2-215	ENST00000569189	GPHN	Q9NQX3	736 aa	Predicted RBP	28.32	■■■□□ 2.12
GGA2-215	ENST00000569189	LOC102724159	A0A0B4J2E5	919 aa		28.31	■■■□□ 2.12
GGA2-215	ENST00000569189	ATN1	P54259	1190 aa	Predicted RBP	28.31	■■■□□ 2.12
GGA2-215	ENST00000569189	COL9A3	Q14050	684 aa	Predicted RBP	28.31	■■■□□ 2.12
GGA2-215	ENST00000569189	PWP2	Q15269	919 aa	Known RBP	28.31	■■■□□ 2.12
GGA2-215	ENST00000569189	RGS22	Q8NE09	1264 aa		28.31	■■■□□ 2.12
GGA2-215	ENST00000569189	MTMR8	Q96EF0	704 aa		28.31	■■■□□ 2.12
GGA2-215	ENST00000569189	TRIOBP	Q9H2D6	2365 aa		28.3	■■■□□ 2.12
GGA2-215	ENST00000569189	SH2B2	O14492	632 aa	Predicted RBP	28.3	■■■□□ 2.12
GGA2-215	ENST00000569189	ADCYAP1R1	P41586	468 aa		28.3	■■■□□ 2.12
GGA2-215	ENST00000569189	ZNF654	Q8IZM8	581 aa		28.3	■■■□□ 2.12
GGA2-215	ENST00000569189	MAF1	Q9H063	256 aa		28.3	■■■□□ 2.12
GGA2-215	ENST00000569189	PHF24	Q9UPV7	400 aa		28.3	■■■□□ 2.12
GGA2-215	ENST00000569189	COLQ	Q9Y215	455 aa	Predicted RBP	28.3	■■■□□ 2.12
GGA2-215	ENST00000569189	RANBP2	P49792	3224 aa	Known RBP	28.3	■■■□□ 2.12
GGA2-215	ENST00000569189	ZBTB5	O15062	677 aa		28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	DDAH1	O94760	285 aa		28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	SLC35G1	Q2M3R5	365 aa		28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	CHRDL2	Q6WN34	429 aa		28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	FBXO16	Q8IX29	292 aa	Predicted RBP	28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	TMTC2	Q8N394	836 aa		28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	NUP133	Q8WUM0	1156 aa		28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	AMN	Q9BXJ7	453 aa		28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	VTA1	Q9NP79	307 aa		28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	MRPL11	Q9Y3B7	192 aa	Known RBP	28.29	■■■□□ 2.12
GGA2-215	ENST00000569189	NFXL1	Q6ZNB6	911 aa		28.28	■■■□□ 2.12
GGA2-215	ENST00000569189	EEPD1	Q7L9B9	569 aa		28.28	■■■□□ 2.12
GGA2-215	ENST00000569189	DNER	Q8NFT8	737 aa		28.28	■■■□□ 2.12
GGA2-215	ENST00000569189	FERMT2	Q96AC1	680 aa		28.28	■■■□□ 2.12
GGA2-215	ENST00000569189	MAP3K14	Q99558	947 aa		28.28	■■■□□ 2.12
GGA2-215	ENST00000569189	RIOX1	Q9H6W3	641 aa		28.28	■■■□□ 2.12
GGA2-215	ENST00000569189	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	28.27	■■■□□ 2.12
GGA2-215	ENST00000569189	TNFAIP2	Q03169	654 aa		28.27	■■■□□ 2.12
GGA2-215	ENST00000569189	SLC39A5	Q6ZMH5	540 aa		28.27	■■■□□ 2.12
GGA2-215	ENST00000569189	HOMER1	Q86YM7	354 aa		28.27	■■■□□ 2.12

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