RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 RBM8AQ9Y5S9 174 aaKnown RBP34.38■■■■□ 3.09
RAB40C-211ENST00000568586 LOC102724159A0A0B4J2E5 919 aa34.37■■■■□ 3.09
RAB40C-211ENST00000568586 NFIBO00712 420 aa34.37■■■■□ 3.09
RAB40C-211ENST00000568586 PWP2Q15269 919 aaKnown RBP34.37■■■■□ 3.09
RAB40C-211ENST00000568586 C1orf53Q5VUE5 145 aa34.37■■■■□ 3.09
RAB40C-211ENST00000568586 NSMFQ6X4W1 530 aa34.37■■■■□ 3.09
RAB40C-211ENST00000568586 STOX1Q6ZVD7 989 aa34.37■■■■□ 3.09
RAB40C-211ENST00000568586 NCOA7Q8NI08 942 aa34.37■■■■□ 3.09
RAB40C-211ENST00000568586 MAF1Q9H063 256 aa34.37■■■■□ 3.09
RAB40C-211ENST00000568586 MCM3APO60318 1980 aa34.36■■■■□ 3.09
RAB40C-211ENST00000568586 PGK1P00558 417 aa34.36■■■■□ 3.09
RAB40C-211ENST00000568586 PARP1P09874 1014 aaKnown RBP34.36■■■■□ 3.09
RAB40C-211ENST00000568586 CCDC144BQ3MJ40 725 aa34.36■■■■□ 3.09
RAB40C-211ENST00000568586 SLC39A5Q6ZMH5 540 aa34.36■■■■□ 3.09
RAB40C-211ENST00000568586 SKAP1Q86WV1 359 aa34.36■■■■□ 3.09
RAB40C-211ENST00000568586 KLHDC9Q8NEP7 349 aa34.36■■■■□ 3.09
RAB40C-211ENST00000568586 GDF15Q99988 308 aa34.36■■■■□ 3.09
RAB40C-211ENST00000568586 TSEN34Q9BSV6 310 aaKnown RBP34.36■■■■□ 3.09
RAB40C-211ENST00000568586 CPVLQ9H3G5 476 aa34.36■■■■□ 3.09
RAB40C-211ENST00000568586 ADCYAP1R1P41586 468 aa34.35■■■■□ 3.09
RAB40C-211ENST00000568586 BAATQ14032 418 aaPredicted RBP34.35■■■■□ 3.09
RAB40C-211ENST00000568586 KIAA1211Q6ZU35 1233 aa34.35■■■■□ 3.09
RAB40C-211ENST00000568586 ADGRF4Q8IZF3 695 aa34.35■■■■□ 3.09
RAB40C-211ENST00000568586 RGS22Q8NE09 1264 aa34.35■■■■□ 3.09
RAB40C-211ENST00000568586 LENG1Q96BZ8 264 aaPredicted RBP34.35■■■■□ 3.09
RAB40C-211ENST00000568586 ZMYND8Q9ULU4 1186 aaPredicted RBP34.35■■■■□ 3.09
RAB40C-211ENST00000568586 ADCY6O43306 1168 aa34.34■■■■□ 3.09
RAB40C-211ENST00000568586 BMP8BP34820 402 aa34.34■■■■□ 3.09
RAB40C-211ENST00000568586 NKX3-2P78367 333 aa34.34■■■■□ 3.09
RAB40C-211ENST00000568586 CCSAPQ6IQ19 270 aaPredicted RBP34.34■■■■□ 3.09
RAB40C-211ENST00000568586 RALYLQ86SE5 291 aaKnown RBP34.34■■■■□ 3.09
RAB40C-211ENST00000568586 SYNRGQ9UMZ2 1314 aa34.33■■■■□ 3.09
RAB40C-211ENST00000568586 A0A1W2PPC1 479 aa34.33■■■■□ 3.09
RAB40C-211ENST00000568586 ATN1P54259 1190 aaPredicted RBP34.33■■■■□ 3.09
RAB40C-211ENST00000568586 UPF3AQ9H1J1 476 aaKnown RBP34.33■■■■□ 3.09
RAB40C-211ENST00000568586 ADD3Q9UEY8 706 aaKnown RBP34.33■■■■□ 3.09
RAB40C-211ENST00000568586 LCTP09848 1927 aa34.33■■■■□ 3.09
RAB40C-211ENST00000568586 CST5P28325 142 aaPredicted RBP34.32■■■■□ 3.08
RAB40C-211ENST00000568586 CDC37Q16543 378 aaPredicted RBP34.32■■■■□ 3.08
RAB40C-211ENST00000568586 MB21D2Q8IYB1 491 aaPredicted RBP34.32■■■■□ 3.08
RAB40C-211ENST00000568586 JMJD4Q9H9V9 463 aa34.32■■■■□ 3.08
RAB40C-211ENST00000568586 PALM3A6NDB9 673 aaPredicted RBP34.31■■■■□ 3.08
RAB40C-211ENST00000568586 IFIT3O14879 490 aaKnown RBP34.31■■■■□ 3.08
RAB40C-211ENST00000568586 FXR1P51114 621 aaKnown RBP eCLIP34.31■■■■□ 3.08
RAB40C-211ENST00000568586 GJA9P57773 515 aa34.31■■■■□ 3.08
RAB40C-211ENST00000568586 RTP1P59025 263 aa34.31■■■■□ 3.08
RAB40C-211ENST00000568586 PURBQ96QR8 312 aaKnown RBP34.31■■■■□ 3.08
RAB40C-211ENST00000568586 MTA3Q9BTC8 594 aa34.31■■■■□ 3.08
RAB40C-211ENST00000568586 MYCNP04198 464 aaPredicted RBP34.3■■■■□ 3.08
RAB40C-211ENST00000568586 SYN1P17600 705 aa34.3■■■■□ 3.08
RAB40C-211ENST00000568586 ANTXR2P58335 489 aa34.3■■■■□ 3.08
RAB40C-211ENST00000568586 RNF207Q6ZRF8 634 aa34.3■■■■□ 3.08
RAB40C-211ENST00000568586 STAG2Q8N3U4 1231 aa34.3■■■■□ 3.08
RAB40C-211ENST00000568586 IGDCC4Q8TDY8 1250 aa34.3■■■■□ 3.08
RAB40C-211ENST00000568586 MTMR8Q96EF0 704 aa34.3■■■■□ 3.08
RAB40C-211ENST00000568586 MAD2L2Q9UI95 211 aa34.3■■■■□ 3.08
RAB40C-211ENST00000568586 RPS6P62753 249 aaKnown RBP34.29■■■■□ 3.08
RAB40C-211ENST00000568586 SART3Q15020 963 aaKnown RBP34.29■■■■□ 3.08
RAB40C-211ENST00000568586 NECTIN1Q15223 517 aa34.29■■■■□ 3.08
RAB40C-211ENST00000568586 TAPT1Q6NXT6 567 aa34.29■■■■□ 3.08
RAB40C-211ENST00000568586 ERICH2A1L162 156 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 PTPDC1A2A3K4 754 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 MOXD2PA6NHM9 499 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 ALDH5A1P51649 535 aaPredicted RBP34.28■■■■□ 3.08
RAB40C-211ENST00000568586 TROAPQ12815 778 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 QRICH1Q2TAL8 776 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 SLC30A10Q6XR72 485 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 FERMT2Q96AC1 680 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 CCDC136Q96JN2 1154 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 SENP2Q9HC62 589 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 VTA1Q9NP79 307 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 GNEQ9Y223 722 aaKnown RBP34.28■■■■□ 3.08
RAB40C-211ENST00000568586 ABCB11O95342 1321 aa34.28■■■■□ 3.08
RAB40C-211ENST00000568586 A0A1W2PQ45 241 aaPredicted RBP34.27■■■■□ 3.08
RAB40C-211ENST00000568586 A0A1W2PQY0 241 aa34.27■■■■□ 3.08
RAB40C-211ENST00000568586 KLRF2D3W0D1 207 aa34.27■■■■□ 3.08
RAB40C-211ENST00000568586 CTAGE5O15320 804 aa34.27■■■■□ 3.08
RAB40C-211ENST00000568586 ACLYP53396 1101 aa34.27■■■■□ 3.08
RAB40C-211ENST00000568586 GRM4Q14833 912 aa34.27■■■■□ 3.08
RAB40C-211ENST00000568586 IQSEC1Q6DN90 963 aa34.27■■■■□ 3.08
RAB40C-211ENST00000568586 DNERQ8NFT8 737 aa34.27■■■■□ 3.08
RAB40C-211ENST00000568586 DDX49Q9Y6V7 483 aaKnown RBP34.27■■■■□ 3.08
RAB40C-211ENST00000568586 LAMA3Q16787 3333 aa34.27■■■■□ 3.08
RAB40C-211ENST00000568586 SLC27A2O14975 620 aa34.26■■■■□ 3.08
RAB40C-211ENST00000568586 MAGEA10P43363 369 aaPredicted RBP34.26■■■■□ 3.08
RAB40C-211ENST00000568586 TNFAIP2Q03169 654 aa34.26■■■■□ 3.08
RAB40C-211ENST00000568586 WTAPQ15007 396 aa34.26■■■■□ 3.08
RAB40C-211ENST00000568586 USH1GQ495M9 461 aa34.26■■■■□ 3.08
RAB40C-211ENST00000568586 SPC25Q9HBM1 224 aa34.26■■■■□ 3.08
RAB40C-211ENST00000568586 LRRC37A2A6NM11 1700 aa34.26■■■■□ 3.07
RAB40C-211ENST00000568586 MYADML2A6NDP7 307 aa34.25■■■■□ 3.07
RAB40C-211ENST00000568586 EDNRBP24530 442 aa34.25■■■■□ 3.07
RAB40C-211ENST00000568586 KCNA10Q16322 511 aa34.25■■■■□ 3.07
RAB40C-211ENST00000568586 CHST3Q7LGC8 479 aa34.25■■■■□ 3.07
RAB40C-211ENST00000568586 C11orf97A0A1B0GVM6 126 aaPredicted RBP34.24■■■■□ 3.07
RAB40C-211ENST00000568586 CALML3P27482 149 aa34.24■■■■□ 3.07
RAB40C-211ENST00000568586 TRIM60Q495X7 471 aa34.24■■■■□ 3.07
RAB40C-211ENST00000568586 TMEM67Q5HYA8 995 aa34.24■■■■□ 3.07
RAB40C-211ENST00000568586 CREB3L3Q68CJ9 461 aa34.24■■■■□ 3.07
RAB40C-211ENST00000568586 FBXO11Q86XK2 927 aa34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms