RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 AOC3Q16853 763 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 RGL3Q3MIN7 710 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 SPRED2Q7Z698 418 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 MFSD4AQ8N468 514 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 NGEFQ8N5V2 710 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 FBXO27Q8NI29 283 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 RIN3Q8TB24 985 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 CYB5D2Q8WUJ1 264 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 ZNF296Q8WUU4 475 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-217ENST00000567817 ASB11Q8WXH4 323 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 SYT17Q9BSW7 474 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 CLTCL1P53675 1640 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 UTRNP46939 3433 aa6.86□□□□□ -1.31
CAPN3-217ENST00000567817 SBNO2Q9Y2G9 1366 aa6.85□□□□□ -1.31
CAPN3-217ENST00000567817 MYOM1P52179 1685 aa6.85□□□□□ -1.31
CAPN3-217ENST00000567817 TLR3O15455 904 aaKnown RBP6.85□□□□□ -1.31
CAPN3-217ENST00000567817 RECKO95980 971 aa6.85□□□□□ -1.31
CAPN3-217ENST00000567817 CD8BP10966 210 aa6.85□□□□□ -1.31
CAPN3-217ENST00000567817 KIR3DL1P43629 444 aa6.85□□□□□ -1.31
CAPN3-217ENST00000567817 FANCCQ00597 558 aa6.85□□□□□ -1.31
CAPN3-217ENST00000567817 CBLL1Q75N03 491 aa6.85□□□□□ -1.31
CAPN3-217ENST00000567817 SLFN12Q8IYM2 578 aa6.85□□□□□ -1.31
CAPN3-217ENST00000567817 ADAMTS1Q9UHI8 967 aa6.85□□□□□ -1.31
CAPN3-217ENST00000567817 KIAA1210Q9ULL0 1709 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 PITPNM2Q9BZ72 1349 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 PRR33A8MZF0 331 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 GRIN3BO60391 1043 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 FUT4P22083 530 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 PLCL1Q15111 1095 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 ANGEL2Q5VTE6 544 aaKnown RBP6.84□□□□□ -1.31
CAPN3-217ENST00000567817 CDH24Q86UP0 819 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 DNAJB8Q8NHS0 232 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 MTFR1LQ9H019 292 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 PRDM11Q9NQV5 511 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 THRAP3Q9Y2W1 955 aaKnown RBP6.84□□□□□ -1.31
CAPN3-217ENST00000567817 CAPN6Q9Y6Q1 641 aa6.84□□□□□ -1.31
CAPN3-217ENST00000567817 OVOS2A0A0G2JMS6 1433 aa6.84□□□□□ -1.32
CAPN3-217ENST00000567817 OVOS2A0A0J9YW53 1432 aa6.84□□□□□ -1.32
CAPN3-217ENST00000567817 OVOS2Q6IE36 1432 aa6.84□□□□□ -1.32
CAPN3-217ENST00000567817 CNTNAP4Q9C0A0 1308 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 UPK3BL1B0FP48 263 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 FAM155AB1AL88 458 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-217ENST00000567817 UPK3BL2E5RIL1 263 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 HSPA6P17066 643 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 RNF34Q969K3 372 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 NT5C1AQ9BXI3 368 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 PANK3Q9H999 370 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 KLHL3Q9UH77 587 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 CEP131Q9UPN4 1083 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 KNSTRNQ9Y448 316 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 PIK3C2GO75747 1445 aa6.83□□□□□ -1.32
CAPN3-217ENST00000567817 AATKQ6ZMQ8 1374 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 PPLO60437 1756 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 IFT172Q9UG01 1749 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 ALS2Q96Q42 1657 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 SCAMP3O14828 347 aaKnown RBP6.82□□□□□ -1.32
CAPN3-217ENST00000567817 ATE1O95260 518 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 CD96P40200 585 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 CRKP46108 304 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 THAP5Q7Z6K1 395 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 USP48Q86UV5 1035 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 KIAA0825Q8IV33 1275 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 RGS22Q8NE09 1264 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 PPP1R13LQ8WUF5 828 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 CCDC136Q96JN2 1154 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 SPON2Q9BUD6 331 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 BRMS1Q9HCU9 246 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 UBP1Q9NZI7 540 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 PCDHB14Q9Y5E9 798 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 BCL9O00512 1426 aa6.82□□□□□ -1.32
CAPN3-217ENST00000567817 TRPM3Q9HCF6 1732 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-217ENST00000567817 CBX7O95931 251 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 TAL1P17542 331 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-217ENST00000567817 RRP1P56182 461 aaKnown RBP6.81□□□□□ -1.32
CAPN3-217ENST00000567817 APOBRQ0VD83 1088 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 ZNF792Q3KQV3 632 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 REXO1Q8N1G1 1221 aaKnown RBP6.81□□□□□ -1.32
CAPN3-217ENST00000567817 TCP11L2Q8N4U5 519 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 PIWIL2Q8TC59 973 aaKnown RBP6.81□□□□□ -1.32
CAPN3-217ENST00000567817 MRRFQ96E11 262 aaKnown RBP6.81□□□□□ -1.32
CAPN3-217ENST00000567817 CCDC74BQ96LY2 380 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 HSPA12BQ96MM6 686 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 PUS7Q96PZ0 661 aaKnown RBP6.81□□□□□ -1.32
CAPN3-217ENST00000567817 SEMA3GQ9NS98 782 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 STK32BQ9NY57 414 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 RCAN3Q9UKA8 241 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 ST14Q9Y5Y6 855 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 SSH2Q76I76 1423 aa6.81□□□□□ -1.32
CAPN3-217ENST00000567817 PARP4Q9UKK3 1724 aaKnown RBP6.81□□□□□ -1.32
CAPN3-217ENST00000567817 ATP7BP35670 1465 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 CHURC1-FNTBB4DL54 471 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 DNAJA2O60884 412 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 ZBTB7AO95365 584 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 IKZF1Q13422 519 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 WDR43Q15061 677 aaKnown RBP eCLIP6.8□□□□□ -1.32
CAPN3-217ENST00000567817 GPR162Q16538 588 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 SEZ6Q53EL9 994 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 CDKAL1Q5VV42 579 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 SLITRK4Q8IW52 837 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 RNF141Q8WVD5 230 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms