RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 UNC80Q8N2C7 3258 aa15.96■□□□□ 0.15
VPS9D1-204ENST00000565023 PTPDC1A2A3K4 754 aa15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 NFIBO00712 420 aa15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 SNHG28P0DPA3 235 aa15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 ACVR2BQ13705 512 aa15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 MAMDC4Q6UXC1 1216 aa15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 KIAA1211Q6ZU35 1233 aa15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 EEPD1Q7L9B9 569 aa15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 CHST3Q7LGC8 479 aa15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 RALYLQ86SE5 291 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 MSL3Q8N5Y2 521 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 FAM133AQ8N9E0 248 aa15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 VAT1LQ9HCJ6 419 aa15.95■□□□□ 0.14
VPS9D1-204ENST00000565023 CALML3P27482 149 aa15.94■□□□□ 0.14
VPS9D1-204ENST00000565023 RTP1P59025 263 aa15.94■□□□□ 0.14
VPS9D1-204ENST00000565023 IRX5P78411 483 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-204ENST00000565023 BAATQ14032 418 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-204ENST00000565023 GPATCH4Q5T3I0 446 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-204ENST00000565023 NOL8Q76FK4 1167 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-204ENST00000565023 ZNF467Q7Z7K2 595 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-204ENST00000565023 RNF180Q86T96 592 aa15.94■□□□□ 0.14
VPS9D1-204ENST00000565023 CYP39A1Q9NYL5 469 aa15.94■□□□□ 0.14
VPS9D1-204ENST00000565023 RBM8AQ9Y5S9 174 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-204ENST00000565023 E7EWF7 191 aa15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 IFIT3O14879 490 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 PARP1P09874 1014 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 CDC37Q16543 378 aaPredicted RBP15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 CCDC144BQ3MJ40 725 aa15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 SLC30A10Q6XR72 485 aa15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 SLC39A5Q6ZMH5 540 aa15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 STOX1Q6ZVD7 989 aa15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 ANKS1AQ92625 1134 aa15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 ABHD16BQ9H3Z7 469 aa15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 PRDM5Q9NQX1 630 aaPredicted RBP15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 LRRC37A2A6NM11 1700 aa15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 SYNRGQ9UMZ2 1314 aa15.93■□□□□ 0.14
VPS9D1-204ENST00000565023 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 ERICH2A1L162 156 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 MYADML2A6NDP7 307 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 ASB14A6NK59 587 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 ADCY6O43306 1168 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 MAGEA10P43363 369 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 NT5C2P49902 561 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 MDM2Q00987 491 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 TRIM60Q495X7 471 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 ASPRV1Q53RT3 343 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 FBXO16Q8IX29 292 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 ADGRF4Q8IZF3 695 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 STAG2Q8N3U4 1231 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 NCOA7Q8NI08 942 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 ESYT1Q9BSJ8 1104 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 ASTN1O14525 1302 aa15.92■□□□□ 0.14
VPS9D1-204ENST00000565023 C6orf222P0C671 652 aaPredicted RBP15.91■□□□□ 0.14
VPS9D1-204ENST00000565023 PTGS1P23219 599 aa15.91■□□□□ 0.14
VPS9D1-204ENST00000565023 SEC23AQ15436 765 aa15.91■□□□□ 0.14
VPS9D1-204ENST00000565023 RNF207Q6ZRF8 634 aa15.91■□□□□ 0.14
VPS9D1-204ENST00000565023 CLEC4DQ8WXI8 215 aa15.91■□□□□ 0.14
VPS9D1-204ENST00000565023 MAP4K1Q92918 833 aa15.91■□□□□ 0.14
VPS9D1-204ENST00000565023 SENP2Q9HC62 589 aa15.91■□□□□ 0.14
VPS9D1-204ENST00000565023 ANO2Q9NQ90 1003 aa15.91■□□□□ 0.14
VPS9D1-204ENST00000565023 BAZ2BQ9UIF8 2168 aaKnown RBP15.91■□□□□ 0.14
VPS9D1-204ENST00000565023 ADAMTS4O75173 837 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 DUSP11O75319 330 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 TNFAIP2Q03169 654 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 WTAPQ15007 396 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 QRICH1Q2TAL8 776 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 SLC17A8Q8NDX2 589 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 VTI1AQ96AJ9 217 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 KATNBL1Q9H079 304 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 LSG1Q9H089 658 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 SPC25Q9HBM1 224 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 PDGFCQ9NRA1 345 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 PRKAG2Q9UGJ0 569 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 PHF24Q9UPV7 400 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 WDR19Q8NEZ3 1342 aa15.9■□□□□ 0.14
VPS9D1-204ENST00000565023 A0A1W2PQ45 241 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 A0A1W2PQY0 241 aa15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 ALDH5A1P51649 535 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 RPS6P62753 249 aaKnown RBP15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 BEX3Q00994 111 aa15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 KCNA10Q16322 511 aa15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 TMEM67Q5HYA8 995 aa15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 TBC1D5Q92609 795 aa15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 GDF15Q99988 308 aa15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 UBE2OQ9C0C9 1292 aaKnown RBP15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 PRO3102Q9H379 93 aa15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 JMJD4Q9H9V9 463 aa15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 ADD3Q9UEY8 706 aaKnown RBP15.89■□□□□ 0.13
VPS9D1-204ENST00000565023 KLRF2D3W0D1 207 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 PQBP1O60828 265 aaKnown RBP15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 ACLYP53396 1101 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 ANTXR2P58335 489 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 GNASQ5JWF2 1037 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 TMEM63BQ5T3F8 832 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 FBXO11Q86XK2 927 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 HOMER1Q86YM7 354 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 NUP133Q8WUM0 1156 aa15.88■□□□□ 0.13
VPS9D1-204ENST00000565023 PIBF1Q8WXW3 757 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms