RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ANKRD35Q8N283 1001 aa19.35■□□□□ 0.69
RNF40-206ENST00000564260 ZNF713Q8N859 430 aaPredicted RBP19.35■□□□□ 0.69
RNF40-206ENST00000564260 MYL10Q9BUA6 226 aa19.35■□□□□ 0.69
RNF40-206ENST00000564260 NRBP1Q9UHY1 535 aa19.35■□□□□ 0.69
RNF40-206ENST00000564260 HPS5Q9UPZ3 1129 aa19.35■□□□□ 0.69
RNF40-206ENST00000564260 HTTP42858 3142 aa19.35■□□□□ 0.69
RNF40-206ENST00000564260 DNAJC25-GNG10A0A024R161 153 aa19.34■□□□□ 0.69
RNF40-206ENST00000564260 CYTH3O43739 400 aa19.34■□□□□ 0.69
RNF40-206ENST00000564260 HMGCRP04035 888 aa19.34■□□□□ 0.69
RNF40-206ENST00000564260 ALAS1P13196 640 aa19.34■□□□□ 0.69
RNF40-206ENST00000564260 UBXN2AP68543 259 aa19.34■□□□□ 0.69
RNF40-206ENST00000564260 GHRHRQ02643 423 aa19.34■□□□□ 0.69
RNF40-206ENST00000564260 APOBRQ0VD83 1088 aa19.34■□□□□ 0.69
RNF40-206ENST00000564260 DDX11Q96FC9 970 aa19.34■□□□□ 0.69
RNF40-206ENST00000564260 PDIA3P30101 505 aaKnown RBP19.33■□□□□ 0.68
RNF40-206ENST00000564260 RABEP1Q15276 862 aa19.33■□□□□ 0.68
RNF40-206ENST00000564260 CPLX2Q6PUV4 134 aaKnown RBP19.33■□□□□ 0.68
RNF40-206ENST00000564260 SRBD1Q8N5C6 995 aaKnown RBP19.33■□□□□ 0.68
RNF40-206ENST00000564260 TBC1D32Q96NH3 1257 aa19.33■□□□□ 0.68
RNF40-206ENST00000564260 IGHA2P01877 340 aa19.32■□□□□ 0.68
RNF40-206ENST00000564260 CYP2B6P20813 491 aa19.32■□□□□ 0.68
RNF40-206ENST00000564260 NEK4P51957 841 aa19.32■□□□□ 0.68
RNF40-206ENST00000564260 ZNF792Q3KQV3 632 aa19.32■□□□□ 0.68
RNF40-206ENST00000564260 FAM177A1Q8N128 213 aaPredicted RBP19.32■□□□□ 0.68
RNF40-206ENST00000564260 CPVLQ9H3G5 476 aa19.32■□□□□ 0.68
RNF40-206ENST00000564260 VAT1LQ9HCJ6 419 aa19.32■□□□□ 0.68
RNF40-206ENST00000564260 A1CFQ9NQ94 594 aaKnown RBP19.32■□□□□ 0.68
RNF40-206ENST00000564260 PCDHA1Q9Y5I3 950 aa19.32■□□□□ 0.68
RNF40-206ENST00000564260 PLEKHA8P1O95397 391 aa19.31■□□□□ 0.68
RNF40-206ENST00000564260 FUT2Q10981 343 aa19.31■□□□□ 0.68
RNF40-206ENST00000564260 MFSD14CQ5VZR4 134 aa19.31■□□□□ 0.68
RNF40-206ENST00000564260 MAMDC4Q6UXC1 1216 aa19.31■□□□□ 0.68
RNF40-206ENST00000564260 CLEC4DQ8WXI8 215 aa19.31■□□□□ 0.68
RNF40-206ENST00000564260 ZNF333Q96JL9 665 aa19.31■□□□□ 0.68
RNF40-206ENST00000564260 PIGSQ96S52 555 aa19.31■□□□□ 0.68
RNF40-206ENST00000564260 MPHOSPH6Q99547 160 aaKnown RBP19.31■□□□□ 0.68
RNF40-206ENST00000564260 HOMER2Q9NSB8 354 aa19.31■□□□□ 0.68
RNF40-206ENST00000564260 FAM217BQ9NTX9 383 aaPredicted RBP19.31■□□□□ 0.68
RNF40-206ENST00000564260 CYP39A1Q9NYL5 469 aa19.31■□□□□ 0.68
RNF40-206ENST00000564260 ADD3Q9UEY8 706 aaKnown RBP19.31■□□□□ 0.68
RNF40-206ENST00000564260 SYNGAP1Q96PV0 1343 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 B4DLN1 442 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 POTEB2H3BUK9 544 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 CDKL5O76039 1030 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 IFNAR1P17181 557 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 RXRAP19793 462 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 MRPL12P52815 198 aaKnown RBP19.3■□□□□ 0.68
RNF40-206ENST00000564260 SNAP25P60880 206 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 SLC35G1Q2M3R5 365 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 MAP3K21Q5TCX8 1036 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 PPP1R18Q6NYC8 613 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 HOMER1Q86YM7 354 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 CCDC144CPQ8IYA2 1237 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 FAM133AQ8N9E0 248 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 ABHD8Q96I13 439 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 MAML3Q96JK9 1138 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 KIF2CQ99661 725 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 GLT8D2Q9H1C3 349 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 NAP1L2Q9ULW6 460 aaPredicted RBP19.3■□□□□ 0.68
RNF40-206ENST00000564260 ZSWIM8A7E2V4 1837 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 PLXNB2O15031 1838 aa19.3■□□□□ 0.68
RNF40-206ENST00000564260 CNTNAP5Q8WYK1 1306 aa19.29■□□□□ 0.68
RNF40-206ENST00000564260 COBLO75128 1261 aa19.29■□□□□ 0.68
RNF40-206ENST00000564260 AK2P54819 239 aa19.29■□□□□ 0.68
RNF40-206ENST00000564260 USH1GQ495M9 461 aa19.29■□□□□ 0.68
RNF40-206ENST00000564260 RNF207Q6ZRF8 634 aa19.29■□□□□ 0.68
RNF40-206ENST00000564260 DNERQ8NFT8 737 aa19.29■□□□□ 0.68
RNF40-206ENST00000564260 TRIB2Q92519 343 aa19.29■□□□□ 0.68
RNF40-206ENST00000564260 RNF26Q9BY78 433 aaPredicted RBP19.29■□□□□ 0.68
RNF40-206ENST00000564260 ASB14A6NK59 587 aa19.28■□□□□ 0.68
RNF40-206ENST00000564260 ST18O60284 1047 aa19.28■□□□□ 0.68
RNF40-206ENST00000564260 PFKFB2O60825 505 aa19.28■□□□□ 0.68
RNF40-206ENST00000564260 INHAP05111 366 aa19.28■□□□□ 0.68
RNF40-206ENST00000564260 CDC27P30260 824 aa19.28■□□□□ 0.68
RNF40-206ENST00000564260 ADD1P35611 737 aaKnown RBP19.28■□□□□ 0.68
RNF40-206ENST00000564260 SLC4A3P48751 1232 aa19.28■□□□□ 0.68
RNF40-206ENST00000564260 MCM2P49736 904 aa19.28■□□□□ 0.68
RNF40-206ENST00000564260 MUM1L1Q5H9M0 696 aa19.28■□□□□ 0.68
RNF40-206ENST00000564260 RPTORQ8N122 1335 aa19.27■□□□□ 0.68
RNF40-206ENST00000564260 NFIBO00712 420 aa19.27■□□□□ 0.68
RNF40-206ENST00000564260 CPLX1O14810 134 aa19.27■□□□□ 0.68
RNF40-206ENST00000564260 PRPF3O43395 683 aaKnown RBP19.27■□□□□ 0.68
RNF40-206ENST00000564260 PPP1R11O60927 126 aaPredicted RBP19.27■□□□□ 0.68
RNF40-206ENST00000564260 ECM2O94769 699 aaPredicted RBP19.27■□□□□ 0.68
RNF40-206ENST00000564260 HSD17B4P51659 736 aa19.27■□□□□ 0.68
RNF40-206ENST00000564260 AKAP17AQ02040 695 aaKnown RBP19.27■□□□□ 0.68
RNF40-206ENST00000564260 NTRK3Q16288 839 aa19.27■□□□□ 0.68
RNF40-206ENST00000564260 NSMFQ6X4W1 530 aa19.27■□□□□ 0.68
RNF40-206ENST00000564260 TRIM22Q8IYM9 498 aa19.27■□□□□ 0.68
RNF40-206ENST00000564260 NPLOC4Q8TAT6 608 aa19.27■□□□□ 0.68
RNF40-206ENST00000564260 CCDC12Q8WUD4 166 aaPredicted RBP19.27■□□□□ 0.68
RNF40-206ENST00000564260 ZSCAN31Q96LW9 406 aaPredicted RBP19.27■□□□□ 0.68
RNF40-206ENST00000564260 TINF2Q9BSI4 451 aa19.27■□□□□ 0.68
RNF40-206ENST00000564260 SLKQ9H2G2 1235 aaPredicted RBP19.27■□□□□ 0.68
RNF40-206ENST00000564260 BIN2Q9UBW5 565 aaPredicted RBP19.27■□□□□ 0.68
RNF40-206ENST00000564260 PIK3CDO00329 1044 aa19.26■□□□□ 0.67
RNF40-206ENST00000564260 MSCO60682 206 aa19.26■□□□□ 0.67
RNF40-206ENST00000564260 PGK2P07205 417 aa19.26■□□□□ 0.67
RNF40-206ENST00000564260 ELNP15502 786 aa19.26■□□□□ 0.67
RNF40-206ENST00000564260 RPS6P62753 249 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms