RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ARMCX2Q7L311 632 aa23.15■■□□□ 1.3
CMTM3-207ENST00000564060 CATIPQ7Z7H3 387 aa23.15■■□□□ 1.3
CMTM3-207ENST00000564060 TMEM87BQ96K49 555 aa23.15■■□□□ 1.3
CMTM3-207ENST00000564060 FGD4Q96M96 766 aa23.15■■□□□ 1.3
CMTM3-207ENST00000564060 ADD3Q9UEY8 706 aaKnown RBP23.15■■□□□ 1.3
CMTM3-207ENST00000564060 ZHX1Q9UKY1 873 aaPredicted RBP23.15■■□□□ 1.3
CMTM3-207ENST00000564060 ABCB11O95342 1321 aa23.14■■□□□ 1.3
CMTM3-207ENST00000564060 SNAI1O95863 264 aaPredicted RBP23.14■■□□□ 1.29
CMTM3-207ENST00000564060 COL6A1P12109 1028 aa23.14■■□□□ 1.29
CMTM3-207ENST00000564060 CNTN2Q02246 1040 aa23.14■■□□□ 1.29
CMTM3-207ENST00000564060 CHST3Q7LGC8 479 aa23.14■■□□□ 1.29
CMTM3-207ENST00000564060 CCDC144CPQ8IYA2 1237 aa23.14■■□□□ 1.29
CMTM3-207ENST00000564060 TMTC2Q8N394 836 aa23.14■■□□□ 1.29
CMTM3-207ENST00000564060 FAM184BQ9ULE4 1060 aa23.14■■□□□ 1.29
CMTM3-207ENST00000564060 PTPDC1A2A3K4 754 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 KLRF2D3W0D1 207 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 NFIBO00712 420 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 ANTXR2P58335 489 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 ACVR2BQ13705 512 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 GRM4Q14833 912 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 ANO1Q5XXA6 986 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 IGDCC4Q8TDY8 1250 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 MPHOSPH6Q99547 160 aaKnown RBP23.13■■□□□ 1.29
CMTM3-207ENST00000564060 CPVLQ9H3G5 476 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 XPNPEP3Q9NQH7 507 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 MAD2L2Q9UI95 211 aa23.13■■□□□ 1.29
CMTM3-207ENST00000564060 PALM3A6NDB9 673 aaPredicted RBP23.12■■□□□ 1.29
CMTM3-207ENST00000564060 PRC1O43663 620 aa23.12■■□□□ 1.29
CMTM3-207ENST00000564060 TAL1P17542 331 aaPredicted RBP23.12■■□□□ 1.29
CMTM3-207ENST00000564060 TRAF1Q13077 416 aa23.12■■□□□ 1.29
CMTM3-207ENST00000564060 BAATQ14032 418 aaPredicted RBP23.12■■□□□ 1.29
CMTM3-207ENST00000564060 USH1GQ495M9 461 aa23.12■■□□□ 1.29
CMTM3-207ENST00000564060 RNF207Q6ZRF8 634 aa23.12■■□□□ 1.29
CMTM3-207ENST00000564060 RNF180Q86T96 592 aa23.12■■□□□ 1.29
CMTM3-207ENST00000564060 MAP3K14Q99558 947 aa23.12■■□□□ 1.29
CMTM3-207ENST00000564060 SOWAHBA6NEL2 793 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 DDAH1O94760 285 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 TROAPQ12815 778 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 KRT32Q14532 448 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 QRICH1Q2TAL8 776 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 FBXO11Q86XK2 927 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 STAG2Q8N3U4 1231 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 RGS22Q8NE09 1264 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 CLEC4DQ8WXI8 215 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 JMJD4Q9H9V9 463 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 VAT1LQ9HCJ6 419 aa23.11■■□□□ 1.29
CMTM3-207ENST00000564060 BAZ2BQ9UIF8 2168 aaKnown RBP23.1■■□□□ 1.29
CMTM3-207ENST00000564060 CCDC69A6NI79 296 aa23.1■■□□□ 1.29
CMTM3-207ENST00000564060 B4DLN1 442 aa23.1■■□□□ 1.29
CMTM3-207ENST00000564060 REC8O95072 547 aa23.1■■□□□ 1.29
CMTM3-207ENST00000564060 KIF5BP33176 963 aa23.1■■□□□ 1.29
CMTM3-207ENST00000564060 MRPL12P52815 198 aaKnown RBP23.1■■□□□ 1.29
CMTM3-207ENST00000564060 GJC2Q5T442 439 aaPredicted RBP23.1■■□□□ 1.29
CMTM3-207ENST00000564060 NFXL1Q6ZNB6 911 aa23.1■■□□□ 1.29
CMTM3-207ENST00000564060 MCF2L2Q86YR7 1114 aa23.1■■□□□ 1.29
CMTM3-207ENST00000564060 CTCFLQ8NI51 663 aaPredicted RBP23.1■■□□□ 1.29
CMTM3-207ENST00000564060 AMNQ9BXJ7 453 aa23.1■■□□□ 1.29
CMTM3-207ENST00000564060 LY9Q9HBG7 655 aa23.1■■□□□ 1.29
CMTM3-207ENST00000564060 MRPL11Q9Y3B7 192 aaKnown RBP23.1■■□□□ 1.29
CMTM3-207ENST00000564060 H0YGN5 161 aa23.09■■□□□ 1.29
CMTM3-207ENST00000564060 DUSP11O75319 330 aaKnown RBP23.09■■□□□ 1.29
CMTM3-207ENST00000564060 MYCNP04198 464 aaPredicted RBP23.09■■□□□ 1.29
CMTM3-207ENST00000564060 CALML3P27482 149 aa23.09■■□□□ 1.29
CMTM3-207ENST00000564060 LIFRP42702 1097 aa23.09■■□□□ 1.29
CMTM3-207ENST00000564060 RPS6P62753 249 aaKnown RBP23.09■■□□□ 1.29
CMTM3-207ENST00000564060 LRRC41Q15345 812 aa23.09■■□□□ 1.29
CMTM3-207ENST00000564060 TSGA10IPQ3SY00 556 aa23.09■■□□□ 1.29
CMTM3-207ENST00000564060 ZNF654Q8IZM8 581 aa23.09■■□□□ 1.29
CMTM3-207ENST00000564060 DNERQ8NFT8 737 aa23.09■■□□□ 1.29
CMTM3-207ENST00000564060 NEK1Q96PY6 1258 aa23.09■■□□□ 1.29
CMTM3-207ENST00000564060 SENP6Q9GZR1 1112 aaPredicted RBP23.09■■□□□ 1.29
CMTM3-207ENST00000564060 SPC25Q9HBM1 224 aa23.09■■□□□ 1.29
CMTM3-207ENST00000564060 SH2B2O14492 632 aaPredicted RBP23.08■■□□□ 1.29
CMTM3-207ENST00000564060 ZBTB5O15062 677 aa23.08■■□□□ 1.29
CMTM3-207ENST00000564060 CALM1P0DP23 149 aa23.08■■□□□ 1.29
CMTM3-207ENST00000564060 CALM2P0DP24 149 aa23.08■■□□□ 1.29
CMTM3-207ENST00000564060 CALM3P0DP25 149 aa23.08■■□□□ 1.29
CMTM3-207ENST00000564060 ALDH5A1P51649 535 aaPredicted RBP23.08■■□□□ 1.29
CMTM3-207ENST00000564060 CCDC144BQ3MJ40 725 aa23.08■■□□□ 1.29
CMTM3-207ENST00000564060 SLC30A10Q6XR72 485 aa23.08■■□□□ 1.29
CMTM3-207ENST00000564060 NUP133Q8WUM0 1156 aa23.08■■□□□ 1.29
CMTM3-207ENST00000564060 MTMR8Q96EF0 704 aa23.08■■□□□ 1.29
CMTM3-207ENST00000564060 SENP2Q9HC62 589 aa23.08■■□□□ 1.29
CMTM3-207ENST00000564060 VTA1Q9NP79 307 aa23.08■■□□□ 1.29
CMTM3-207ENST00000564060 MORC4Q8TE76 937 aa23.07■■□□□ 1.28
CMTM3-207ENST00000564060 KATNBL1Q9H079 304 aa23.07■■□□□ 1.28
CMTM3-207ENST00000564060 RIOX1Q9H6W3 641 aa23.07■■□□□ 1.28
CMTM3-207ENST00000564060 CEP290O15078 2479 aa23.07■■□□□ 1.28
CMTM3-207ENST00000564060 ASTN1O14525 1302 aa23.07■■□□□ 1.28
CMTM3-207ENST00000564060 PGK1P00558 417 aa23.06■■□□□ 1.28
CMTM3-207ENST00000564060 HMGB1P09429 215 aaKnown RBP23.06■■□□□ 1.28
CMTM3-207ENST00000564060 GNAQP50148 359 aa23.06■■□□□ 1.28
CMTM3-207ENST00000564060 C7orf61Q8IZ16 206 aa23.06■■□□□ 1.28
CMTM3-207ENST00000564060 LZTS2Q9BRK4 669 aa23.06■■□□□ 1.28
CMTM3-207ENST00000564060 TSEN34Q9BSV6 310 aaKnown RBP23.06■■□□□ 1.28
CMTM3-207ENST00000564060 SYNRGQ9UMZ2 1314 aa23.06■■□□□ 1.28
CMTM3-207ENST00000564060 EPB41L2O43491 1005 aaKnown RBP23.05■■□□□ 1.28
CMTM3-207ENST00000564060 ADAMTS4O75173 837 aa23.05■■□□□ 1.28
CMTM3-207ENST00000564060 SMARCA1P28370 1054 aa23.05■■□□□ 1.28
CMTM3-207ENST00000564060 HOMER1Q86YM7 354 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms