RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 NUDT12Q9BQG2 462 aa17.12■□□□□ 0.33
SCAMP2-203ENST00000563663 FLRT1Q9NZU1 646 aa17.12■□□□□ 0.33
SCAMP2-203ENST00000563663 KLF18A0A0U1RQI7 1052 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 STRNO43815 780 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 ELNP15502 786 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 COPB2P35606 906 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 CCL14Q16627 93 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 NFXL1Q6ZNB6 911 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 TMTC3Q6ZXV5 915 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 CCDC144CPQ8IYA2 1237 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 FANCBQ8NB91 859 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 PXYLP1Q8TE99 480 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 SPZ1Q9BXG8 430 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 CYP46A1Q9Y6A2 500 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 ASTN1O14525 1302 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 LRRC37A2A6NM11 1700 aa17.11■□□□□ 0.33
SCAMP2-203ENST00000563663 OPLAHO14841 1288 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 CDC27P30260 824 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 CMTR1Q8N1G2 835 aaKnown RBP17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 CHST13Q8NET6 341 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 SH3TC2Q8TF17 1288 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 ZNF333Q96JL9 665 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 APBA2Q99767 749 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 A1CFQ9NQ94 594 aaKnown RBP17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 RNF146Q9NTX7 359 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 CCPG1Q9ULG6 757 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 DNAH12Q6ZR08 3092 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 NFIBO00712 420 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 CALM1P0DP23 149 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 CALM2P0DP24 149 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 CALM3P0DP25 149 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 CYP2B6P20813 491 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 SMARCA1P28370 1054 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 WDR78Q5VTH9 848 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 ALDH8A1Q9H2A2 487 aaPredicted RBP17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 HOMER2Q9NSB8 354 aa17.1■□□□□ 0.33
SCAMP2-203ENST00000563663 CNTNAP5Q8WYK1 1306 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 GOLGA6L3A6NEY3 463 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 ZBTB43O43298 467 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 ADCY3O60266 1144 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 PGK2P07205 417 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 FCER1AP12319 257 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 GRK4P32298 578 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 RGS2P41220 211 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 TRIM32Q13049 653 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 ZNF792Q3KQV3 632 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 TKFCQ3LXA3 575 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 MAP3K21Q5TCX8 1036 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 SLAIN1Q8ND83 568 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 CTCFLQ8NI51 663 aaPredicted RBP17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 RAET1EQ8TD07 263 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 TRERF1Q96PN7 1200 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 PIGSQ96S52 555 aa17.09■□□□□ 0.33
SCAMP2-203ENST00000563663 FRMPD3Q5JV73 1810 aa17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 ZBTB5O15062 677 aa17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 BAG4O95429 457 aaKnown RBP17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 ALAS1P13196 640 aa17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 PDIA3P30101 505 aaKnown RBP17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 KIF5BP33176 963 aa17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 CCAR1Q8IX12 1150 aaKnown RBP17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 TMX3Q96JJ7 454 aa17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 MMP19Q99542 508 aa17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 ACAD9Q9H845 621 aa17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 VAT1LQ9HCJ6 419 aa17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 IVNS1ABPQ9Y6Y0 642 aa17.08■□□□□ 0.33
SCAMP2-203ENST00000563663 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 NTRK3Q16288 839 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 SLC9C1Q4G0N8 1177 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 FAM133AQ8N9E0 248 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 LARP6Q9BRS8 491 aaKnown RBP17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 FBXO40Q9UH90 709 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 GHRHRQ02643 423 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 RTN1Q16799 776 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 MAML3Q96JK9 1138 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 PDRG1Q9NUG6 133 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
SCAMP2-203ENST00000563663 GOLGA8AA7E2F4 631 aa17.06■□□□□ 0.32
SCAMP2-203ENST00000563663 INHAP05111 366 aa17.06■□□□□ 0.32
SCAMP2-203ENST00000563663 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
SCAMP2-203ENST00000563663 KCTD2Q14681 263 aa17.06■□□□□ 0.32
SCAMP2-203ENST00000563663 MTFR1Q15390 333 aa17.06■□□□□ 0.32
SCAMP2-203ENST00000563663 USH1GQ495M9 461 aa17.06■□□□□ 0.32
SCAMP2-203ENST00000563663 PURBQ96QR8 312 aaKnown RBP17.06■□□□□ 0.32
SCAMP2-203ENST00000563663 LZTS2Q9BRK4 669 aa17.06■□□□□ 0.32
SCAMP2-203ENST00000563663 CTDP1Q9Y5B0 961 aaPredicted RBP17.06■□□□□ 0.32
SCAMP2-203ENST00000563663 PNMA6FA0A0J9YX94 578 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 HMGCRP04035 888 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 MRE11P49959 708 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 GNAQP50148 359 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 AK2P54819 239 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 CNTN2Q02246 1040 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 OLFML2BQ68BL8 750 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 HOMER1Q86YM7 354 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 TBC1D5Q92609 795 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 RBM28Q9NW13 759 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 TPCN1Q9ULQ1 816 aa17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 DIS3Q9Y2L1 958 aaKnown RBP17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 METAP2P50579 478 aaKnown RBP eCLIP17.05■□□□□ 0.32
SCAMP2-203ENST00000563663 KLHL40Q2TBA0 621 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms