RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 RTP1P59025 263 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 TRDNQ13061 729 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 COL9A3Q14050 684 aaPredicted RBP11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 CDC37Q16543 378 aaPredicted RBP11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 TKFCQ3LXA3 575 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 CCDC144BQ3MJ40 725 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 TRIM60Q495X7 471 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 CENPQQ7L2Z9 268 aaPredicted RBP11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 RALYLQ86SE5 291 aaKnown RBP11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 RAB11FIP4Q86YS3 637 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 FBXO16Q8IX29 292 aaPredicted RBP11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 ADGRF4Q8IZF3 695 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 STAG2Q8N3U4 1231 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 FAM133AQ8N9E0 248 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 PIBF1Q8WXW3 757 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 TBC1D5Q92609 795 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 CCDC136Q96JN2 1154 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 ESYT1Q9BSJ8 1104 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 CNNM2Q9H8M5 875 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 PRDM5Q9NQX1 630 aaPredicted RBP11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 CYP39A1Q9NYL5 469 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 FAM184BQ9ULE4 1060 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
NSMCE1-203ENST00000562039 PARP1P09874 1014 aaKnown RBP11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 CAPN2P17655 700 aa11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 MAGEA10P43363 369 aaPredicted RBP11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 BEX3Q00994 111 aa11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 SEC23AQ15436 765 aa11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 CCDC178Q5BJE1 867 aa11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 MAMDC4Q6UXC1 1216 aa11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 SLC39A5Q6ZMH5 540 aa11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 KIAA1211Q6ZU35 1233 aa11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 CLEC4DQ8WXI8 215 aa11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 ANO2Q9NQ90 1003 aa11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 SYNGAP1Q96PV0 1343 aa11.08□□□□□ -0.64
NSMCE1-203ENST00000562039 BAZ2BQ9UIF8 2168 aaKnown RBP11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 ADAMTS4O75173 837 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 C6orf222P0C671 652 aaPredicted RBP11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 ANTXR2P58335 489 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 QRICH1Q2TAL8 776 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 RNF207Q6ZRF8 634 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 SH3RF1Q7Z6J0 888 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 RNF180Q86T96 592 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 HOMER1Q86YM7 354 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 NCOA7Q8NI08 942 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 NUP133Q8WUM0 1156 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 ANKS1AQ92625 1134 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 MAP4K1Q92918 833 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 VTI1AQ96AJ9 217 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 LRRC2Q9BYS8 371 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 KATNBL1Q9H079 304 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 LSG1Q9H089 658 aaKnown RBP11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 LCTP09848 1927 aa11.07□□□□□ -0.64
NSMCE1-203ENST00000562039 A0A1W2PQ45 241 aaPredicted RBP11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 A0A1W2PQY0 241 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 ERICH2A1L162 156 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 SLC27A2O14975 620 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 PQBP1O60828 265 aaKnown RBP11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 SLC34A2O95436 690 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 RXRAP19793 462 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 ALDH5A1P51649 535 aaPredicted RBP11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 RPS6P62753 249 aaKnown RBP11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 TNFAIP2Q03169 654 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 WTAPQ15007 396 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 KCNA10Q16322 511 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 SLC35G1Q2M3R5 365 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 ASPRV1Q53RT3 343 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 TMEM67Q5HYA8 995 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 MSL3Q8N5Y2 521 aaKnown RBP11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 PPP1R13LQ8WUF5 828 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 ABHD16BQ9H3Z7 469 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 JMJD4Q9H9V9 463 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 NRBP1Q9UHY1 535 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 PHF24Q9UPV7 400 aa11.06□□□□□ -0.64
NSMCE1-203ENST00000562039 ASB14A6NK59 587 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 KLRF2D3W0D1 207 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 SOX1O00570 391 aaPredicted RBP11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 DYNC1LI2O43237 492 aaPredicted RBP11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 SMPD1P17405 629 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 ACLYP53396 1101 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 TLE2Q04725 743 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 CREB3L3Q68CJ9 461 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 FBXO11Q86XK2 927 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 MB21D2Q8IYB1 491 aaPredicted RBP11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 ZFP91Q96JP5 570 aaPredicted RBP11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 TCEANC2Q96MN5 208 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 PIGSQ96S52 555 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 GDF15Q99988 308 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 UBE2OQ9C0C9 1292 aaKnown RBP11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 PRO3102Q9H379 93 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 STARD7Q9NQZ5 370 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 MAD2L2Q9UI95 211 aa11.05□□□□□ -0.64
NSMCE1-203ENST00000562039 MYH6P13533 1939 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 PRC1O43663 620 aa11.04□□□□□ -0.64
NSMCE1-203ENST00000562039 PPP1R11O60927 126 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms