RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 ASTN1O14525 1302 aa27.83■■■□□ 2.05
CDR2-202ENST00000561630 ERICH2A1L162 156 aa27.82■■■□□ 2.04
CDR2-202ENST00000561630 BAATQ14032 418 aaPredicted RBP27.82■■■□□ 2.04
CDR2-202ENST00000561630 KATNBL1Q9H079 304 aa27.82■■■□□ 2.04
CDR2-202ENST00000561630 COLQQ9Y215 455 aaPredicted RBP27.82■■■□□ 2.04
CDR2-202ENST00000561630 MYCNP04198 464 aaPredicted RBP27.81■■■□□ 2.04
CDR2-202ENST00000561630 ANTXR2P58335 489 aa27.81■■■□□ 2.04
CDR2-202ENST00000561630 NECTIN1Q15223 517 aa27.81■■■□□ 2.04
CDR2-202ENST00000561630 CDC37Q16543 378 aaPredicted RBP27.81■■■□□ 2.04
CDR2-202ENST00000561630 CHST3Q7LGC8 479 aa27.81■■■□□ 2.04
CDR2-202ENST00000561630 STAG2Q8N3U4 1231 aa27.81■■■□□ 2.04
CDR2-202ENST00000561630 LENG1Q96BZ8 264 aaPredicted RBP27.81■■■□□ 2.04
CDR2-202ENST00000561630 SLC27A2O14975 620 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 CDC45O75419 566 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 PGK1P00558 417 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 WTAPQ15007 396 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 CCDC144BQ3MJ40 725 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 HABP4Q5JVS0 413 aaKnown RBP27.8■■■□□ 2.04
CDR2-202ENST00000561630 CASC1Q6TDU7 716 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 RNF180Q86T96 592 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 IGDCC4Q8TDY8 1250 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 PURBQ96QR8 312 aaKnown RBP27.8■■■□□ 2.04
CDR2-202ENST00000561630 JMJD4Q9H9V9 463 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 SENP2Q9HC62 589 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 MAD2L2Q9UI95 211 aa27.8■■■□□ 2.04
CDR2-202ENST00000561630 PTPDC1A2A3K4 754 aa27.79■■■□□ 2.04
CDR2-202ENST00000561630 ADAMTS4O75173 837 aa27.79■■■□□ 2.04
CDR2-202ENST00000561630 DUSP11O75319 330 aaKnown RBP27.79■■■□□ 2.04
CDR2-202ENST00000561630 USH1GQ495M9 461 aa27.79■■■□□ 2.04
CDR2-202ENST00000561630 TMEM67Q5HYA8 995 aa27.79■■■□□ 2.04
CDR2-202ENST00000561630 CREB3L3Q68CJ9 461 aa27.79■■■□□ 2.04
CDR2-202ENST00000561630 CHRDL2Q6WN34 429 aa27.79■■■□□ 2.04
CDR2-202ENST00000561630 PALM3A6NDB9 673 aaPredicted RBP27.78■■■□□ 2.04
CDR2-202ENST00000561630 KLRF2D3W0D1 207 aa27.78■■■□□ 2.04
CDR2-202ENST00000561630 DHX16O60231 1041 aaKnown RBP27.78■■■□□ 2.04
CDR2-202ENST00000561630 ADCYAP1R1P41586 468 aa27.78■■■□□ 2.04
CDR2-202ENST00000561630 ATN1P54259 1190 aaPredicted RBP27.78■■■□□ 2.04
CDR2-202ENST00000561630 RNF207Q6ZRF8 634 aa27.78■■■□□ 2.04
CDR2-202ENST00000561630 RGS22Q8NE09 1264 aa27.78■■■□□ 2.04
CDR2-202ENST00000561630 MORC4Q8TE76 937 aa27.78■■■□□ 2.04
CDR2-202ENST00000561630 MTA3Q9BTC8 594 aa27.78■■■□□ 2.04
CDR2-202ENST00000561630 VAT1LQ9HCJ6 419 aa27.78■■■□□ 2.04
CDR2-202ENST00000561630 ADD3Q9UEY8 706 aaKnown RBP27.78■■■□□ 2.04
CDR2-202ENST00000561630 PHF24Q9UPV7 400 aa27.78■■■□□ 2.04
CDR2-202ENST00000561630 ALPK3Q96L96 1907 aa27.77■■■□□ 2.04
CDR2-202ENST00000561630 SYNRGQ9UMZ2 1314 aa27.77■■■□□ 2.04
CDR2-202ENST00000561630 ADCY6O43306 1168 aa27.77■■■□□ 2.04
CDR2-202ENST00000561630 RPS6P62753 249 aaKnown RBP27.77■■■□□ 2.04
CDR2-202ENST00000561630 TROAPQ12815 778 aa27.77■■■□□ 2.04
CDR2-202ENST00000561630 GRM4Q14833 912 aa27.77■■■□□ 2.04
CDR2-202ENST00000561630 QRICH1Q2TAL8 776 aa27.77■■■□□ 2.04
CDR2-202ENST00000561630 SLC30A10Q6XR72 485 aa27.77■■■□□ 2.04
CDR2-202ENST00000561630 MAF1Q9H063 256 aa27.77■■■□□ 2.04
CDR2-202ENST00000561630 ZMYND8Q9ULU4 1186 aaPredicted RBP27.77■■■□□ 2.04
CDR2-202ENST00000561630 DDX49Q9Y6V7 483 aaKnown RBP27.77■■■□□ 2.04
CDR2-202ENST00000561630 ABCB11O95342 1321 aa27.76■■■□□ 2.03
CDR2-202ENST00000561630 LOC102724159A0A0B4J2E5 919 aa27.76■■■□□ 2.03
CDR2-202ENST00000561630 CALML3P27482 149 aa27.76■■■□□ 2.03
CDR2-202ENST00000561630 PWP2Q15269 919 aaKnown RBP27.76■■■□□ 2.03
CDR2-202ENST00000561630 SLC39A5Q6ZMH5 540 aa27.76■■■□□ 2.03
CDR2-202ENST00000561630 PRO3102Q9H379 93 aa27.76■■■□□ 2.03
CDR2-202ENST00000561630 MCM5P33992 734 aa27.75■■■□□ 2.03
CDR2-202ENST00000561630 ALDH5A1P51649 535 aaPredicted RBP27.75■■■□□ 2.03
CDR2-202ENST00000561630 CATIPQ7Z7H3 387 aa27.75■■■□□ 2.03
CDR2-202ENST00000561630 FBXO11Q86XK2 927 aa27.75■■■□□ 2.03
CDR2-202ENST00000561630 KLHDC9Q8NEP7 349 aa27.75■■■□□ 2.03
CDR2-202ENST00000561630 FERMT2Q96AC1 680 aa27.75■■■□□ 2.03
CDR2-202ENST00000561630 MTMR8Q96EF0 704 aa27.75■■■□□ 2.03
CDR2-202ENST00000561630 TSEN34Q9BSV6 310 aaKnown RBP27.75■■■□□ 2.03
CDR2-202ENST00000561630 SMCHD1A6NHR9 2005 aa27.75■■■□□ 2.03
CDR2-202ENST00000561630 PRC1O43663 620 aa27.74■■■□□ 2.03
CDR2-202ENST00000561630 SNX17Q15036 470 aa27.74■■■□□ 2.03
CDR2-202ENST00000561630 LY9Q9HBG7 655 aa27.74■■■□□ 2.03
CDR2-202ENST00000561630 SYN1P17600 705 aa27.73■■■□□ 2.03
CDR2-202ENST00000561630 RTP1P59025 263 aa27.73■■■□□ 2.03
CDR2-202ENST00000561630 TNFAIP2Q03169 654 aa27.73■■■□□ 2.03
CDR2-202ENST00000561630 SLC35G1Q2M3R5 365 aa27.73■■■□□ 2.03
CDR2-202ENST00000561630 RNF20Q5VTR2 975 aa27.73■■■□□ 2.03
CDR2-202ENST00000561630 CCSAPQ6IQ19 270 aaPredicted RBP27.73■■■□□ 2.03
CDR2-202ENST00000561630 UPF3AQ9H1J1 476 aaKnown RBP27.73■■■□□ 2.03
CDR2-202ENST00000561630 VTA1Q9NP79 307 aa27.73■■■□□ 2.03
CDR2-202ENST00000561630 GPHNQ9NQX3 736 aaPredicted RBP27.73■■■□□ 2.03
CDR2-202ENST00000561630 RBM27Q9P2N5 1060 aaKnown RBP27.73■■■□□ 2.03
CDR2-202ENST00000561630 MRPL11Q9Y3B7 192 aaKnown RBP27.73■■■□□ 2.03
CDR2-202ENST00000561630 ZBTB5O15062 677 aa27.72■■■□□ 2.03
CDR2-202ENST00000561630 CST5P28325 142 aaPredicted RBP27.72■■■□□ 2.03
CDR2-202ENST00000561630 GJA9P57773 515 aa27.72■■■□□ 2.03
CDR2-202ENST00000561630 COL9A3Q14050 684 aaPredicted RBP27.72■■■□□ 2.03
CDR2-202ENST00000561630 C1orf53Q5VUE5 145 aa27.72■■■□□ 2.03
CDR2-202ENST00000561630 TAPT1Q6NXT6 567 aa27.72■■■□□ 2.03
CDR2-202ENST00000561630 EEPD1Q7L9B9 569 aa27.72■■■□□ 2.03
CDR2-202ENST00000561630 FBXO16Q8IX29 292 aaPredicted RBP27.72■■■□□ 2.03
CDR2-202ENST00000561630 DNERQ8NFT8 737 aa27.72■■■□□ 2.03
CDR2-202ENST00000561630 TMEM87BQ96K49 555 aa27.72■■■□□ 2.03
CDR2-202ENST00000561630 AMNQ9BXJ7 453 aa27.72■■■□□ 2.03
CDR2-202ENST00000561630 RIOX1Q9H6W3 641 aa27.72■■■□□ 2.03
CDR2-202ENST00000561630 SPC25Q9HBM1 224 aa27.72■■■□□ 2.03
CDR2-202ENST00000561630 TRIOBPQ9H2D6 2365 aa27.71■■■□□ 2.03
CDR2-202ENST00000561630 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.71■■■□□ 2.03
CDR2-202ENST00000561630 A0A1W2PQ45 241 aaPredicted RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms