RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 CHST13Q8NET6 341 aa17.29■□□□□ 0.36
IDH3A-219ENST00000560414 NR2E3Q9Y5X4 410 aa17.29■□□□□ 0.36
IDH3A-219ENST00000560414 PDHBP11177 359 aa17.28■□□□□ 0.36
IDH3A-219ENST00000560414 COL6A1P12109 1028 aa17.28■□□□□ 0.36
IDH3A-219ENST00000560414 ALAS1P13196 640 aa17.28■□□□□ 0.36
IDH3A-219ENST00000560414 PTH1RQ03431 593 aa17.28■□□□□ 0.36
IDH3A-219ENST00000560414 RUFY2Q8WXA3 655 aa17.28■□□□□ 0.36
IDH3A-219ENST00000560414 SCUBE2Q9NQ36 999 aa17.28■□□□□ 0.36
IDH3A-219ENST00000560414 RNF146Q9NTX7 359 aa17.28■□□□□ 0.36
IDH3A-219ENST00000560414 ZSWIM5Q9P217 1185 aa17.28■□□□□ 0.36
IDH3A-219ENST00000560414 FBXO40Q9UH90 709 aa17.28■□□□□ 0.36
IDH3A-219ENST00000560414 ALPK3Q96L96 1907 aa17.27■□□□□ 0.36
IDH3A-219ENST00000560414 RAD50Q92878 1312 aa17.27■□□□□ 0.36
IDH3A-219ENST00000560414 PLXNA1Q9UIW2 1896 aa17.27■□□□□ 0.36
IDH3A-219ENST00000560414 LAMA4Q16363 1823 aa17.27■□□□□ 0.36
IDH3A-219ENST00000560414 HABP4Q5JVS0 413 aaKnown RBP17.27■□□□□ 0.36
IDH3A-219ENST00000560414 GJC2Q5T442 439 aaPredicted RBP17.27■□□□□ 0.36
IDH3A-219ENST00000560414 SYDE2Q5VT97 1194 aa17.27■□□□□ 0.36
IDH3A-219ENST00000560414 BTNL9Q6UXG8 535 aa17.27■□□□□ 0.36
IDH3A-219ENST00000560414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.27■□□□□ 0.36
IDH3A-219ENST00000560414 C7orf61Q8IZ16 206 aa17.27■□□□□ 0.36
IDH3A-219ENST00000560414 TRERF1Q96PN7 1200 aa17.27■□□□□ 0.36
IDH3A-219ENST00000560414 ACAD9Q9H845 621 aa17.27■□□□□ 0.36
IDH3A-219ENST00000560414 FRMPD3Q5JV73 1810 aa17.26■□□□□ 0.35
IDH3A-219ENST00000560414 DPYSL4O14531 572 aa17.26■□□□□ 0.35
IDH3A-219ENST00000560414 SNAI1O95863 264 aaPredicted RBP17.26■□□□□ 0.35
IDH3A-219ENST00000560414 ZNF865P0CJ78 1059 aaPredicted RBP17.26■□□□□ 0.35
IDH3A-219ENST00000560414 ZNF543Q08ER8 600 aa17.26■□□□□ 0.35
IDH3A-219ENST00000560414 MUM1L1Q5H9M0 696 aa17.26■□□□□ 0.35
IDH3A-219ENST00000560414 IQCA1Q86XH1 822 aa17.26■□□□□ 0.35
IDH3A-219ENST00000560414 DGKHQ86XP1 1220 aa17.26■□□□□ 0.35
IDH3A-219ENST00000560414 FGD4Q96M96 766 aa17.26■□□□□ 0.35
IDH3A-219ENST00000560414 ZSCAN10Q96SZ4 725 aaPredicted RBP17.26■□□□□ 0.35
IDH3A-219ENST00000560414 SENP6Q9GZR1 1112 aaPredicted RBP17.26■□□□□ 0.35
IDH3A-219ENST00000560414 RANBP17Q9H2T7 1088 aaKnown RBP17.26■□□□□ 0.35
IDH3A-219ENST00000560414 A1CFQ9NQ94 594 aaKnown RBP17.26■□□□□ 0.35
IDH3A-219ENST00000560414 CCPG1Q9ULG6 757 aa17.26■□□□□ 0.35
IDH3A-219ENST00000560414 SMCHD1A6NHR9 2005 aa17.26■□□□□ 0.35
IDH3A-219ENST00000560414 SGSM2O43147 1006 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 GOLGA8HP0CJ92 632 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 SNHG28P0DPA3 235 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 CNTN2Q02246 1040 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 LRRC26Q2I0M4 334 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 TKFCQ3LXA3 575 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 MAMDC4Q6UXC1 1216 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 ENAHQ8N8S7 591 aaPredicted RBP17.25■□□□□ 0.35
IDH3A-219ENST00000560414 LENG1Q96BZ8 264 aaPredicted RBP17.25■□□□□ 0.35
IDH3A-219ENST00000560414 KRT23Q9C075 422 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 PCDH10Q9P2E7 1040 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 NRBP1Q9UHY1 535 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 ZMYND8Q9ULU4 1186 aaPredicted RBP17.25■□□□□ 0.35
IDH3A-219ENST00000560414 CNPY2Q9Y2B0 182 aa17.25■□□□□ 0.35
IDH3A-219ENST00000560414 DNM1LO00429 736 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 ICAM1P05362 532 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 CYP21A2P08686 494 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 CCDC178Q5BJE1 867 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 CYB5R4Q7L1T6 521 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 MSL3Q8N5Y2 521 aaKnown RBP17.24■□□□□ 0.35
IDH3A-219ENST00000560414 ARRDC4Q8NCT1 418 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 PNMA1Q8ND90 353 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 ANKS1AQ92625 1134 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 CPVLQ9H3G5 476 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 KAT14Q9H8E8 782 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 CNNM2Q9H8M5 875 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 TAF6LQ9Y6J9 622 aa17.24■□□□□ 0.35
IDH3A-219ENST00000560414 TNKSO95271 1327 aa17.23■□□□□ 0.35
IDH3A-219ENST00000560414 SYNGAP1Q96PV0 1343 aa17.23■□□□□ 0.35
IDH3A-219ENST00000560414 DNAH12Q6ZR08 3092 aa17.23■□□□□ 0.35
IDH3A-219ENST00000560414 SOWAHBA6NEL2 793 aa17.23■□□□□ 0.35
IDH3A-219ENST00000560414 RARBP10826 455 aa17.23■□□□□ 0.35
IDH3A-219ENST00000560414 SYN1P17600 705 aa17.23■□□□□ 0.35
IDH3A-219ENST00000560414 NT5C2P49902 561 aa17.23■□□□□ 0.35
IDH3A-219ENST00000560414 CENPQQ7L2Z9 268 aaPredicted RBP17.23■□□□□ 0.35
IDH3A-219ENST00000560414 FAM133AQ8N9E0 248 aa17.23■□□□□ 0.35
IDH3A-219ENST00000560414 UBA5Q9GZZ9 404 aa17.23■□□□□ 0.35
IDH3A-219ENST00000560414 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.23■□□□□ 0.35
IDH3A-219ENST00000560414 ZHX1Q9UKY1 873 aaPredicted RBP17.23■□□□□ 0.35
IDH3A-219ENST00000560414 DDX49Q9Y6V7 483 aaKnown RBP17.23■□□□□ 0.35
IDH3A-219ENST00000560414 RANBP2P49792 3224 aaKnown RBP17.22■□□□□ 0.35
IDH3A-219ENST00000560414 PGK1P00558 417 aa17.22■□□□□ 0.35
IDH3A-219ENST00000560414 AKR1A1P14550 325 aa17.22■□□□□ 0.35
IDH3A-219ENST00000560414 LRRC41Q15345 812 aa17.22■□□□□ 0.35
IDH3A-219ENST00000560414 NSMFQ6X4W1 530 aa17.22■□□□□ 0.35
IDH3A-219ENST00000560414 ARMCX2Q7L311 632 aa17.22■□□□□ 0.35
IDH3A-219ENST00000560414 CCDC144CPQ8IYA2 1237 aa17.22■□□□□ 0.35
IDH3A-219ENST00000560414 PURBQ96QR8 312 aaKnown RBP17.22■□□□□ 0.35
IDH3A-219ENST00000560414 UBAC1Q9BSL1 405 aa17.22■□□□□ 0.35
IDH3A-219ENST00000560414 XPNPEP3Q9NQH7 507 aa17.22■□□□□ 0.35
IDH3A-219ENST00000560414 RBM27Q9P2N5 1060 aaKnown RBP17.22■□□□□ 0.35
IDH3A-219ENST00000560414 TRIOBPQ9H2D6 2365 aa17.21■□□□□ 0.35
IDH3A-219ENST00000560414 KBTBD13C9JR72 458 aa17.21■□□□□ 0.35
IDH3A-219ENST00000560414 ACVR2BQ13705 512 aa17.21■□□□□ 0.35
IDH3A-219ENST00000560414 GPATCH4Q5T3I0 446 aaKnown RBP17.21■□□□□ 0.35
IDH3A-219ENST00000560414 FERMT2Q96AC1 680 aa17.21■□□□□ 0.35
IDH3A-219ENST00000560414 CYP39A1Q9NYL5 469 aa17.21■□□□□ 0.35
IDH3A-219ENST00000560414 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.35
IDH3A-219ENST00000560414 ASTN1O14525 1302 aa17.21■□□□□ 0.34
IDH3A-219ENST00000560414 MCM3APO60318 1980 aa17.2■□□□□ 0.34
IDH3A-219ENST00000560414 NFIBO00712 420 aa17.2■□□□□ 0.34
IDH3A-219ENST00000560414 ADCYAP1R1P41586 468 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms