RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 A0A1W2PRG0 241 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 CDC25BP30305 580 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 TXKP42681 527 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 DLGAP5Q15398 846 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 USH1GQ495M9 461 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 GALNT17Q6IS24 598 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 KANK3Q6NY19 840 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 CCDC17Q96LX7 622 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 PNMA6FA0A0J9YX94 578 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 UBA7P41226 1012 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 UBASH3AP57075 661 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 QRICH1Q2TAL8 776 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 NAALADL2Q58DX5 795 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 RBM26Q5T8P6 1007 aaKnown RBP15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 ARL6IP4Q66PJ3 421 aaKnown RBP15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 TATDN1Q6P1N9 297 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 LRRC8AQ8IWT6 810 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 RTKN2Q8IZC4 609 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 OGFOD1Q8N543 542 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 SPATA20Q8TB22 786 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 MRIQ9BWK5 157 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 KANSL2Q9H9L4 492 aa15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.94■□□□□ 0.14
CARMIL3-203ENST00000560349 F5H6K3 240 aa15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 EDIL3O43854 480 aa15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 EGFRP00533 1210 aa15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 OR52Z1P0C646 297 aa15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 LONP1P36776 959 aaKnown RBP15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 KLRC3Q07444 240 aa15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 NBPF9Q3BBW0 867 aa15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 DISC1Q9NRI5 854 aa15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 ZNF70Q9UC06 446 aaPredicted RBP15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 MYO3BQ8WXR4 1341 aa15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 ZBTB5O15062 677 aa15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 NDUFB10O96000 172 aa15.93■□□□□ 0.14
CARMIL3-203ENST00000560349 TXLNAP40222 546 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 GPATCH4Q5T3I0 446 aaKnown RBP15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 NIM1KQ8IY84 436 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 ACER1Q8TDN7 264 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 BBXQ8WY36 941 aaPredicted RBP15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 INTS13Q9NVM9 706 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 TMOD2Q9NZR1 351 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 GDAQ9Y2T3 454 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 POTEMA6NI47 508 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 VIL1P09327 827 aaKnown RBP15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 CDK11BP21127 795 aaKnown RBP15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 CXCL9Q07325 125 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 CDC37Q16543 378 aaPredicted RBP15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 TMEM179Q6ZVK1 233 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 CREBRFQ8IUR6 639 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 GMLQ99445 158 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 PSMD1Q99460 953 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 CTNND2Q9UQB3 1225 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 PCDHA1Q9Y5I3 950 aa15.92■□□□□ 0.14
CARMIL3-203ENST00000560349 USP27XA6NNY8 438 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 PLCG1P19174 1290 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 KIAA1755Q5JYT7 1200 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 RRAGBQ5VZM2 374 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 MLKLQ8NB16 471 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 EEF2KMTQ96G04 330 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 C16orf45Q96MC5 204 aaPredicted RBP15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 MORC2Q9Y6X9 1032 aaPredicted RBP15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 RIOK3O14730 519 aaKnown RBP15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 SKILP12757 684 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 SMARCA1P28370 1054 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 ARMCX5Q6P1M9 558 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 ELOA2Q8IYF1 753 aaPredicted RBP15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 PSTPIP2Q9H939 334 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 GREB1LQ9C091 1923 aaPredicted RBP15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 CABP7Q86V35 215 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 TRMT1Q9NXH9 659 aaKnown RBP15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 PIM2Q9P1W9 311 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 NYAP2Q9P242 653 aa15.91■□□□□ 0.14
CARMIL3-203ENST00000560349 CNTNAP1P78357 1384 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 SYNRGQ9UMZ2 1314 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 ENTPD3O75355 529 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 CALCRLQ16602 461 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 CCDC34Q96HJ3 373 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 GLIS2Q9BZE0 524 aaPredicted RBP15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 ZNRF3Q9ULT6 936 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 BCS1LQ9Y276 419 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 PPP1R3GB7ZBB8 358 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 CCZ1BP86790 482 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 CCZ1P86791 482 aaPredicted RBP15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 CUL5Q93034 780 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 P2RX7Q99572 595 aaKnown RBP15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 CCDC94Q9BW85 323 aaPredicted RBP15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 RIC8AQ9NPQ8 531 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 HDAC9Q9UKV0 1011 aa15.9■□□□□ 0.14
CARMIL3-203ENST00000560349 ATRNL1Q5VV63 1379 aa15.89■□□□□ 0.13
CARMIL3-203ENST00000560349 ESYT2A0FGR8 921 aa15.89■□□□□ 0.13
CARMIL3-203ENST00000560349 RPN1P04843 607 aaKnown RBP15.89■□□□□ 0.13
CARMIL3-203ENST00000560349 TRIML1Q8N9V2 468 aa15.89■□□□□ 0.13
CARMIL3-203ENST00000560349 HPS3Q969F9 1004 aa15.89■□□□□ 0.13
CARMIL3-203ENST00000560349 GSDMAQ96QA5 445 aa15.89■□□□□ 0.13
CARMIL3-203ENST00000560349 ASTN2O75129 1339 aaPredicted RBP15.89■□□□□ 0.13
CARMIL3-203ENST00000560349 SMCHD1A6NHR9 2005 aa15.89■□□□□ 0.13
CARMIL3-203ENST00000560349 PSDA5PKW4 1024 aaPredicted RBP15.89■□□□□ 0.13
CARMIL3-203ENST00000560349 NUDT12Q9BQG2 462 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms