RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 DPP9Q86TI2 863 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 ANKRD35Q8N283 1001 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 SLAIN1Q8ND83 568 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 CCDC12Q8WUD4 166 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 DDX11Q96FC9 970 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 MMP19Q99542 508 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 MYL10Q9BUA6 226 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 RNF26Q9BY78 433 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 SLKQ9H2G2 1235 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 VAT1LQ9HCJ6 419 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 SH2B1Q9NRF2 756 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 RNF146Q9NTX7 359 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 LIMCH1Q9UPQ0 1083 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 PFKFB2O60825 505 aa13.94□□□□□ -0.18
RABGGTA-215ENST00000560207 ALAS1P13196 640 aa13.94□□□□□ -0.18
RABGGTA-215ENST00000560207 IFNAR1P17181 557 aa13.94□□□□□ -0.18
RABGGTA-215ENST00000560207 ZNF467Q7Z7K2 595 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-215ENST00000560207 AGBL1Q96MI9 1066 aa13.94□□□□□ -0.18
RABGGTA-215ENST00000560207 APBA2Q99767 749 aa13.94□□□□□ -0.18
RABGGTA-215ENST00000560207 ADD3Q9UEY8 706 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-215ENST00000560207 GJD2Q9UKL4 321 aa13.94□□□□□ -0.18
RABGGTA-215ENST00000560207 PCDHA1Q9Y5I3 950 aa13.94□□□□□ -0.18
RABGGTA-215ENST00000560207 ZSWIM8A7E2V4 1837 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 PRPF3O43395 683 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 CYTH3O43739 400 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 FLT3LGP49771 235 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 COL9A3Q14050 684 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 MCTP2Q6DN12 878 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 PPP1R18Q6NYC8 613 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 RASGRP2Q7LDG7 609 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 WASF1Q92558 559 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 USP6NLQ92738 828 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 PIGSQ96S52 555 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 KIF2CQ99661 725 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 NRBP1Q9UHY1 535 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 HPS5Q9UPZ3 1129 aa13.93□□□□□ -0.18
RABGGTA-215ENST00000560207 RXRAP19793 462 aa13.92□□□□□ -0.18
RABGGTA-215ENST00000560207 ADORA2AP29274 412 aa13.92□□□□□ -0.18
RABGGTA-215ENST00000560207 UBXN2AP68543 259 aa13.92□□□□□ -0.18
RABGGTA-215ENST00000560207 GHRHRQ02643 423 aa13.92□□□□□ -0.18
RABGGTA-215ENST00000560207 PRKCZQ05513 592 aa13.92□□□□□ -0.18
RABGGTA-215ENST00000560207 OLFML2BQ68BL8 750 aa13.92□□□□□ -0.18
RABGGTA-215ENST00000560207 HOMER1Q86YM7 354 aa13.92□□□□□ -0.18
RABGGTA-215ENST00000560207 CCDC144CPQ8IYA2 1237 aa13.92□□□□□ -0.18
RABGGTA-215ENST00000560207 ARHGAP39Q9C0H5 1083 aa13.92□□□□□ -0.18
RABGGTA-215ENST00000560207 RIPK3Q9Y572 518 aa13.92□□□□□ -0.18
RABGGTA-215ENST00000560207 ASB14A6NK59 587 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 ADCY3O60266 1144 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 PLEKHA8P1O95397 391 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 DEXIO95424 95 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 XBP1P17861 261 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 CTGFP29279 349 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 GRK4P32298 578 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 ADD1P35611 737 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 SLC4A3P48751 1232 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 SSRP1Q08945 709 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 SLC9C1Q4G0N8 1177 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 RNF207Q6ZRF8 634 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 DNERQ8NFT8 737 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 CUL5Q93034 780 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 LLPHQ9BRT6 129 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 SH3GLB2Q9NR46 395 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 FAM217BQ9NTX9 383 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 TPCN1Q9ULQ1 816 aa13.91□□□□□ -0.18
RABGGTA-215ENST00000560207 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 STK36Q9NRP7 1315 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 DNAJC25-GNG10A0A024R161 153 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 HMGCRP04035 888 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 CDC27P30260 824 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 FUT2Q10981 343 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 NTRK3Q16288 839 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 PFKFB3Q16875 520 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 USH1GQ495M9 461 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 MFSD14CQ5VZR4 134 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 CCDC148Q8NFR7 591 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 GTF3C6Q969F1 213 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 CPVLQ9H3G5 476 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 A1CFQ9NQ94 594 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 HOMER2Q9NSB8 354 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 CYP39A1Q9NYL5 469 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 KIF3AQ9Y496 699 aa13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 V9GY48 417 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-215ENST00000560207 SYNGAP1Q96PV0 1343 aa13.9□□□□□ -0.19
RABGGTA-215ENST00000560207 ESYT2A0FGR8 921 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 PTPDC1A2A3K4 754 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 GCOM1H8Y6P7 765 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 PIK3CDO00329 1044 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 POLR2MP0CAP2 368 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 SCG2P13521 617 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 GNA11P29992 359 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 CCT2P78371 535 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 ZNF792Q3KQV3 632 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 GALNT17Q6IS24 598 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 MAMDC4Q6UXC1 1216 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 NSMFQ6X4W1 530 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 BICD2Q8TD16 824 aa13.89□□□□□ -0.19
RABGGTA-215ENST00000560207 CLEC4DQ8WXI8 215 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms