RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 FRMPD3Q5JV73 1810 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 PRC1O43663 620 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 GOLGA8HP0CJ92 632 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 GJA8P48165 433 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 ANTXR2P58335 489 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 MLLT1Q03111 559 aaPredicted RBP14.58□□□□□ -0.08
SLIRP-211ENST00000557623 TRIM32Q13049 653 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 MAP3K21Q5TCX8 1036 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 CATIPQ7Z7H3 387 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 ANKRD35Q8N283 1001 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 TRERF1Q96PN7 1200 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 NEK1Q96PY6 1258 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.58□□□□□ -0.08
SLIRP-211ENST00000557623 PAK6Q9NQU5 681 aaPredicted RBP14.58□□□□□ -0.08
SLIRP-211ENST00000557623 RNF146Q9NTX7 359 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 FLRT1Q9NZU1 646 aa14.58□□□□□ -0.08
SLIRP-211ENST00000557623 SGPL1O95470 568 aa14.57□□□□□ -0.08
SLIRP-211ENST00000557623 ALAS1P13196 640 aa14.57□□□□□ -0.08
SLIRP-211ENST00000557623 EN2P19622 333 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-211ENST00000557623 SNAP25P60880 206 aa14.57□□□□□ -0.08
SLIRP-211ENST00000557623 CACNB2Q08289 660 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-211ENST00000557623 ZNF792Q3KQV3 632 aa14.57□□□□□ -0.08
SLIRP-211ENST00000557623 U2AF1L4Q8WU68 220 aaKnown RBP14.57□□□□□ -0.08
SLIRP-211ENST00000557623 MAML3Q96JK9 1138 aa14.57□□□□□ -0.08
SLIRP-211ENST00000557623 UBA5Q9GZZ9 404 aa14.57□□□□□ -0.08
SLIRP-211ENST00000557623 HOMER2Q9NSB8 354 aa14.57□□□□□ -0.08
SLIRP-211ENST00000557623 PFASO15067 1338 aa14.57□□□□□ -0.08
SLIRP-211ENST00000557623 WDR19Q8NEZ3 1342 aa14.57□□□□□ -0.08
SLIRP-211ENST00000557623 DNAJC25-GNG10A0A024R161 153 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
SLIRP-211ENST00000557623 EIF5BO60841 1220 aaKnown RBP14.56□□□□□ -0.08
SLIRP-211ENST00000557623 IGHA2P01877 340 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 PGK2P07205 417 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 HMGB1P09429 215 aaKnown RBP14.56□□□□□ -0.08
SLIRP-211ENST00000557623 HSPA4P34932 840 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 LIFRP42702 1097 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 GRM4Q14833 912 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 MSL3Q8N5Y2 521 aaKnown RBP14.56□□□□□ -0.08
SLIRP-211ENST00000557623 KCNB2Q92953 911 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 DEFB118Q96PH6 123 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 MAP3K14Q99558 947 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 MFRPQ9BY79 579 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 LY9Q9HBG7 655 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 SCUBE2Q9NQ36 999 aa14.56□□□□□ -0.08
SLIRP-211ENST00000557623 CENPFP49454 3210 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 MCM3APO60318 1980 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-211ENST00000557623 CCDC69A6NI79 296 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 KLRF2D3W0D1 207 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 SH2B2O14492 632 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-211ENST00000557623 DDAH1O94760 285 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 TFRCP02786 760 aaKnown RBP14.55□□□□□ -0.08
SLIRP-211ENST00000557623 CYP2C19P33261 490 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 TROAPQ12815 778 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 NFXL1Q6ZNB6 911 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 DHX32Q7L7V1 743 aaKnown RBP14.55□□□□□ -0.08
SLIRP-211ENST00000557623 ADGRF4Q8IZF3 695 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 SENP2Q9HC62 589 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 NRBP1Q9UHY1 535 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 MAD2L2Q9UI95 211 aa14.55□□□□□ -0.08
SLIRP-211ENST00000557623 MSCO60682 206 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 CALM1P0DP23 149 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 CALM2P0DP24 149 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 CALM3P0DP25 149 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 CCND3P30281 292 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-211ENST00000557623 KIF5BP33176 963 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 CDC37Q16543 378 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-211ENST00000557623 STAG2Q8N3U4 1231 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-211ENST00000557623 NUP133Q8WUM0 1156 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 TINF2Q9BSI4 451 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 CRISPLD2Q9H0B8 497 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 CPVLQ9H3G5 476 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 A1CFQ9NQ94 594 aaKnown RBP14.54□□□□□ -0.08
SLIRP-211ENST00000557623 LCTP09848 1927 aa14.54□□□□□ -0.08
SLIRP-211ENST00000557623 ABCB11O95342 1321 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 SYNGAP1Q96PV0 1343 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 CYBAP13498 195 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 PSMA5P28066 241 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 CNGA1P29973 690 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 GNAQP50148 359 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 TRAF1Q13077 416 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 ADCK5Q3MIX3 580 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 MUM1L1Q5H9M0 696 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 MAMDC4Q6UXC1 1216 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 SYNE3Q6ZMZ3 975 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 SHISA4Q96DD7 197 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 MAF1Q9H063 256 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 JMJD4Q9H9V9 463 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 VAT1LQ9HCJ6 419 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 SNX14Q9Y5W7 946 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 SLC12A7Q9Y666 1083 aa14.53□□□□□ -0.08
SLIRP-211ENST00000557623 BAZ2BQ9UIF8 2168 aaKnown RBP14.52□□□□□ -0.08
SLIRP-211ENST00000557623 EXOSC10Q01780 885 aaKnown RBP14.52□□□□□ -0.09
SLIRP-211ENST00000557623 QRICH1Q2TAL8 776 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 USH1GQ495M9 461 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 BLOC1S2Q6QNY1 142 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 NSMFQ6X4W1 530 aa14.52□□□□□ -0.09
SLIRP-211ENST00000557623 SGMS1Q86VZ5 419 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms