RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 TSPY3P0CV98 308 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 TSPY8P0CW00 308 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 PLA2G5P39877 138 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 TDO2P48775 406 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 PPP2R2DQ66LE6 453 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 SLFN13Q68D06 897 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 CXCL17Q6UXB2 119 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 KBTBD3Q8NAB2 608 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 NEDD1Q8NHV4 660 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 PHOSPHO2Q8TCD6 241 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 APPBP2Q92624 585 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 MPHOSPH6Q99547 160 aaKnown RBP12.15□□□□□ -0.46
RDH11-210ENST00000557331 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
RDH11-210ENST00000557331 ECHDC1Q9NTX5 307 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 XIRP2A4UGR9 3374 aa12.15□□□□□ -0.46
RDH11-210ENST00000557331 MYH7P12883 1935 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 KIF28PB7ZC32 967 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 PATL2C9JE40 543 aaKnown RBP12.14□□□□□ -0.47
RDH11-210ENST00000557331 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 ERC2O15083 957 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 RNF113AO15541 343 aaKnown RBP12.14□□□□□ -0.47
RDH11-210ENST00000557331 DYNC1LI2O43237 492 aaPredicted RBP12.14□□□□□ -0.47
RDH11-210ENST00000557331 KPNA6O60684 536 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 APPP05067 770 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 ATP2A2P16615 1042 aaKnown RBP12.14□□□□□ -0.47
RDH11-210ENST00000557331 SLC1A4P43007 532 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 CPT1AP50416 773 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 ADGRE1Q14246 886 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 TMEM67Q5HYA8 995 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 OTOP2Q7RTS6 562 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 CEP95Q96GE4 821 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 FGD4Q96M96 766 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 NKX2-4Q9H2Z4 354 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 A1CFQ9NQ94 594 aaKnown RBP12.14□□□□□ -0.47
RDH11-210ENST00000557331 RNF146Q9NTX7 359 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 PLIN4Q96Q06 1357 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 MCM3APO60318 1980 aa12.14□□□□□ -0.47
RDH11-210ENST00000557331 RAD50Q92878 1312 aa12.13□□□□□ -0.47
RDH11-210ENST00000557331 GREB1LQ9C091 1923 aaPredicted RBP12.13□□□□□ -0.47
RDH11-210ENST00000557331 B4DLN1 442 aa12.13□□□□□ -0.47
RDH11-210ENST00000557331 ADCY6O43306 1168 aa12.13□□□□□ -0.47
RDH11-210ENST00000557331 BMP1P13497 986 aa12.13□□□□□ -0.47
RDH11-210ENST00000557331 MRPL12P52815 198 aaKnown RBP12.13□□□□□ -0.47
RDH11-210ENST00000557331 HNRNPUQ00839 825 aaKnown RBP eCLIP12.13□□□□□ -0.47
RDH11-210ENST00000557331 IKQ13123 557 aaPredicted RBP12.13□□□□□ -0.47
RDH11-210ENST00000557331 CCDC85BQ15834 202 aaPredicted RBP12.13□□□□□ -0.47
RDH11-210ENST00000557331 DUSP28Q4G0W2 176 aa12.13□□□□□ -0.47
RDH11-210ENST00000557331 RCSD1Q6JBY9 416 aa12.13□□□□□ -0.47
RDH11-210ENST00000557331 SIRT2Q8IXJ6 389 aa12.13□□□□□ -0.47
RDH11-210ENST00000557331 TRERF1Q96PN7 1200 aa12.13□□□□□ -0.47
RDH11-210ENST00000557331 SLC9A7Q96T83 725 aa12.13□□□□□ -0.47
RDH11-210ENST00000557331 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
RDH11-210ENST00000557331 HOMER2Q9NSB8 354 aa12.13□□□□□ -0.47
RDH11-210ENST00000557331 PRRC2BQ5JSZ5 2229 aaKnown RBP12.13□□□□□ -0.47
RDH11-210ENST00000557331 ZBBXA8MT70 800 aa12.12□□□□□ -0.47
RDH11-210ENST00000557331 SMIM22K7EJ46 135 aa12.12□□□□□ -0.47
RDH11-210ENST00000557331 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
RDH11-210ENST00000557331 NKRFO15226 690 aaKnown RBP eCLIP12.12□□□□□ -0.47
RDH11-210ENST00000557331 GPAA1O43292 621 aa12.12□□□□□ -0.47
RDH11-210ENST00000557331 PARNO95453 639 aaKnown RBP12.12□□□□□ -0.47
RDH11-210ENST00000557331 BEX3Q00994 111 aa12.12□□□□□ -0.47
RDH11-210ENST00000557331 CNTN2Q02246 1040 aa12.12□□□□□ -0.47
RDH11-210ENST00000557331 PTPN11Q06124 597 aaPredicted RBP12.12□□□□□ -0.47
RDH11-210ENST00000557331 MORC4Q8TE76 937 aa12.12□□□□□ -0.47
RDH11-210ENST00000557331 MAF1Q9H063 256 aa12.12□□□□□ -0.47
RDH11-210ENST00000557331 ALDH8A1Q9H2A2 487 aaPredicted RBP12.12□□□□□ -0.47
RDH11-210ENST00000557331 YBX2Q9Y2T7 364 aaKnown RBP12.12□□□□□ -0.47
RDH11-210ENST00000557331 HCN4Q9Y3Q4 1203 aa12.12□□□□□ -0.47
RDH11-210ENST00000557331 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 SOWAHBA6NEL2 793 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 B4GALT4O60513 344 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 ALAS1P13196 640 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 SMPD1P17405 629 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 CCL23P55773 120 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 BFSP2Q13515 415 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 SLFNL1Q499Z3 407 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 NFRKBQ6P4R8 1299 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 KIAA1211Q6ZU35 1233 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 IFNL3Q8IZI9 196 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 RETREG2Q8NC44 543 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 OSBP2Q969R2 916 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 TRPV6Q9H1D0 765 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 CYP39A1Q9NYL5 469 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 LMCD1Q9NZU5 365 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 ISY1Q9ULR0 285 aaKnown RBP12.11□□□□□ -0.47
RDH11-210ENST00000557331 ASTN1O14525 1302 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 GRIN2DO15399 1336 aa12.11□□□□□ -0.47
RDH11-210ENST00000557331 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.1□□□□□ -0.47
RDH11-210ENST00000557331 BAIAP3O94812 1187 aa12.1□□□□□ -0.47
RDH11-210ENST00000557331 ICAM1P05362 532 aa12.1□□□□□ -0.47
RDH11-210ENST00000557331 TFAP4Q01664 338 aa12.1□□□□□ -0.47
RDH11-210ENST00000557331 SKIV2LQ15477 1246 aaKnown RBP12.1□□□□□ -0.47
RDH11-210ENST00000557331 TAPT1Q6NXT6 567 aa12.1□□□□□ -0.47
RDH11-210ENST00000557331 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
RDH11-210ENST00000557331 CCDC155Q8N6L0 562 aa12.1□□□□□ -0.47
RDH11-210ENST00000557331 AGBL1Q96MI9 1066 aa12.1□□□□□ -0.47
RDH11-210ENST00000557331 MTG1Q9BT17 334 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms