RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 IGDCC4Q8TDY8 1250 aa23.95■■□□□ 1.42
VTI1B-205ENST00000555543 GPHNQ9NQX3 736 aaPredicted RBP23.95■■□□□ 1.42
VTI1B-205ENST00000555543 MAD2L2Q9UI95 211 aa23.95■■□□□ 1.42
VTI1B-205ENST00000555543 ZHX1Q9UKY1 873 aaPredicted RBP23.95■■□□□ 1.42
VTI1B-205ENST00000555543 ERICH2A1L162 156 aa23.94■■□□□ 1.42
VTI1B-205ENST00000555543 CENPBP07199 599 aaPredicted RBP23.94■■□□□ 1.42
VTI1B-205ENST00000555543 SART3Q15020 963 aaKnown RBP23.94■■□□□ 1.42
VTI1B-205ENST00000555543 USH1GQ495M9 461 aa23.94■■□□□ 1.42
VTI1B-205ENST00000555543 GJC2Q5T442 439 aaPredicted RBP23.94■■□□□ 1.42
VTI1B-205ENST00000555543 CASC1Q6TDU7 716 aa23.94■■□□□ 1.42
VTI1B-205ENST00000555543 KATNBL1Q9H079 304 aa23.94■■□□□ 1.42
VTI1B-205ENST00000555543 JMJD4Q9H9V9 463 aa23.94■■□□□ 1.42
VTI1B-205ENST00000555543 DNM1LO00429 736 aa23.93■■□□□ 1.42
VTI1B-205ENST00000555543 AKR1A1P14550 325 aa23.93■■□□□ 1.42
VTI1B-205ENST00000555543 BAATQ14032 418 aaPredicted RBP23.93■■□□□ 1.42
VTI1B-205ENST00000555543 SLC35G1Q2M3R5 365 aa23.93■■□□□ 1.42
VTI1B-205ENST00000555543 SLC30A10Q6XR72 485 aa23.93■■□□□ 1.42
VTI1B-205ENST00000555543 LY9Q9HBG7 655 aa23.93■■□□□ 1.42
VTI1B-205ENST00000555543 PPP4R2Q9NY27 417 aa23.93■■□□□ 1.42
VTI1B-205ENST00000555543 PALM3A6NDB9 673 aaPredicted RBP23.92■■□□□ 1.42
VTI1B-205ENST00000555543 KLRF2D3W0D1 207 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 ADCY6O43306 1168 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 PRC1O43663 620 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 EVI5O60447 810 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 RARBP10826 455 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 TROAPQ12815 778 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 ACVR2BQ13705 512 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 GRM4Q14833 912 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 LRRC41Q15345 812 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 QRICH1Q2TAL8 776 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 VAT1LQ9HCJ6 419 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 XPNPEP3Q9NQH7 507 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 PNMA2Q9UL42 364 aa23.92■■□□□ 1.42
VTI1B-205ENST00000555543 PTPDC1A2A3K4 754 aa23.91■■□□□ 1.42
VTI1B-205ENST00000555543 DHX16O60231 1041 aaKnown RBP23.91■■□□□ 1.42
VTI1B-205ENST00000555543 MYCNP04198 464 aaPredicted RBP23.91■■□□□ 1.42
VTI1B-205ENST00000555543 LRRC26Q2I0M4 334 aa23.91■■□□□ 1.42
VTI1B-205ENST00000555543 ARRDC4Q8NCT1 418 aa23.91■■□□□ 1.42
VTI1B-205ENST00000555543 ABHD16BQ9H3Z7 469 aa23.91■■□□□ 1.42
VTI1B-205ENST00000555543 PGK1P00558 417 aa23.9■■□□□ 1.42
VTI1B-205ENST00000555543 MCM5P33992 734 aa23.9■■□□□ 1.42
VTI1B-205ENST00000555543 C7orf61Q8IZ16 206 aa23.9■■□□□ 1.42
VTI1B-205ENST00000555543 SENP6Q9GZR1 1112 aaPredicted RBP23.9■■□□□ 1.42
VTI1B-205ENST00000555543 FAM184BQ9ULE4 1060 aa23.9■■□□□ 1.42
VTI1B-205ENST00000555543 RANBP2P49792 3224 aaKnown RBP23.89■■□□□ 1.42
VTI1B-205ENST00000555543 ASB14A6NK59 587 aa23.89■■□□□ 1.41
VTI1B-205ENST00000555543 KBTBD13C9JR72 458 aa23.89■■□□□ 1.41
VTI1B-205ENST00000555543 SH2B2O14492 632 aaPredicted RBP23.89■■□□□ 1.41
VTI1B-205ENST00000555543 RPS6P62753 249 aaKnown RBP23.89■■□□□ 1.41
VTI1B-205ENST00000555543 CCDC144BQ3MJ40 725 aa23.89■■□□□ 1.41
VTI1B-205ENST00000555543 ERICH6BQ5W0A0 696 aa23.89■■□□□ 1.41
VTI1B-205ENST00000555543 RNF207Q6ZRF8 634 aa23.89■■□□□ 1.41
VTI1B-205ENST00000555543 RASEFQ8IZ41 740 aa23.89■■□□□ 1.41
VTI1B-205ENST00000555543 MTMR8Q96EF0 704 aa23.89■■□□□ 1.41
VTI1B-205ENST00000555543 MTA3Q9BTC8 594 aa23.89■■□□□ 1.41
VTI1B-205ENST00000555543 MYL10Q9BUA6 226 aa23.89■■□□□ 1.41
VTI1B-205ENST00000555543 NR2E3Q9Y5X4 410 aa23.89■■□□□ 1.41
VTI1B-205ENST00000555543 MYH6P13533 1939 aa23.88■■□□□ 1.41
VTI1B-205ENST00000555543 SYNRGQ9UMZ2 1314 aa23.88■■□□□ 1.41
VTI1B-205ENST00000555543 PPP1R11O60927 126 aaPredicted RBP23.88■■□□□ 1.41
VTI1B-205ENST00000555543 ADAMTS4O75173 837 aa23.88■■□□□ 1.41
VTI1B-205ENST00000555543 CALML3P27482 149 aa23.88■■□□□ 1.41
VTI1B-205ENST00000555543 CATIPQ7Z7H3 387 aa23.88■■□□□ 1.41
VTI1B-205ENST00000555543 ZNF654Q8IZM8 581 aa23.88■■□□□ 1.41
VTI1B-205ENST00000555543 LRRC2Q9BYS8 371 aa23.88■■□□□ 1.41
VTI1B-205ENST00000555543 ABCB11O95342 1321 aa23.87■■□□□ 1.41
VTI1B-205ENST00000555543 CYTH3O43739 400 aa23.87■■□□□ 1.41
VTI1B-205ENST00000555543 ALDH5A1P51649 535 aaPredicted RBP23.87■■□□□ 1.41
VTI1B-205ENST00000555543 ATN1P54259 1190 aaPredicted RBP23.87■■□□□ 1.41
VTI1B-205ENST00000555543 IRX5P78411 483 aaPredicted RBP23.87■■□□□ 1.41
VTI1B-205ENST00000555543 RNF20Q5VTR2 975 aa23.87■■□□□ 1.41
VTI1B-205ENST00000555543 FBXO11Q86XK2 927 aa23.87■■□□□ 1.41
VTI1B-205ENST00000555543 FBXO16Q8IX29 292 aaPredicted RBP23.87■■□□□ 1.41
VTI1B-205ENST00000555543 MORC4Q8TE76 937 aa23.87■■□□□ 1.41
VTI1B-205ENST00000555543 TBC1D5Q92609 795 aa23.87■■□□□ 1.41
VTI1B-205ENST00000555543 TMEM87BQ96K49 555 aa23.87■■□□□ 1.41
VTI1B-205ENST00000555543 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.86■■□□□ 1.41
VTI1B-205ENST00000555543 ADCYAP1R1P41586 468 aa23.86■■□□□ 1.41
VTI1B-205ENST00000555543 ADCK5Q3MIX3 580 aa23.86■■□□□ 1.41
VTI1B-205ENST00000555543 EEPD1Q7L9B9 569 aa23.86■■□□□ 1.41
VTI1B-205ENST00000555543 NUP133Q8WUM0 1156 aa23.86■■□□□ 1.41
VTI1B-205ENST00000555543 RIOX1Q9H6W3 641 aa23.86■■□□□ 1.41
VTI1B-205ENST00000555543 PCDH10Q9P2E7 1040 aa23.86■■□□□ 1.41
VTI1B-205ENST00000555543 MYADML2A6NDP7 307 aa23.85■■□□□ 1.41
VTI1B-205ENST00000555543 ZBTB5O15062 677 aa23.85■■□□□ 1.41
VTI1B-205ENST00000555543 DUSP11O75319 330 aaKnown RBP23.85■■□□□ 1.41
VTI1B-205ENST00000555543 DDAH1O94760 285 aa23.85■■□□□ 1.41
VTI1B-205ENST00000555543 RNF180Q86T96 592 aa23.85■■□□□ 1.41
VTI1B-205ENST00000555543 HOMER1Q86YM7 354 aa23.85■■□□□ 1.41
VTI1B-205ENST00000555543 RGS22Q8NE09 1264 aa23.85■■□□□ 1.41
VTI1B-205ENST00000555543 FERMT2Q96AC1 680 aa23.85■■□□□ 1.41
VTI1B-205ENST00000555543 PIGSQ96S52 555 aa23.85■■□□□ 1.41
VTI1B-205ENST00000555543 PDGFCQ9NRA1 345 aa23.85■■□□□ 1.41
VTI1B-205ENST00000555543 ADD3Q9UEY8 706 aaKnown RBP23.85■■□□□ 1.41
VTI1B-205ENST00000555543 ZMYND8Q9ULU4 1186 aaPredicted RBP23.85■■□□□ 1.41
VTI1B-205ENST00000555543 BAZ2BQ9UIF8 2168 aaKnown RBP23.84■■□□□ 1.41
VTI1B-205ENST00000555543 OPLAHO14841 1288 aa23.84■■□□□ 1.41
VTI1B-205ENST00000555543 PTGS1P23219 599 aa23.84■■□□□ 1.41
VTI1B-205ENST00000555543 LIFRP42702 1097 aa23.84■■□□□ 1.41
VTI1B-205ENST00000555543 TSGA10IPQ3SY00 556 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms