RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 C11orf49Q9H6J7 331 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 ZHX1Q9UKY1 873 aaPredicted RBP11.93□□□□□ -0.5
LINC00517-201ENST00000553396 CNPY2Q9Y2B0 182 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 LRRC37A2A6NM11 1700 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 PFASO15067 1338 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 H0YGN5 161 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 SNAI1O95863 264 aaPredicted RBP11.92□□□□□ -0.5
LINC00517-201ENST00000553396 ZNF865P0CJ78 1059 aaPredicted RBP11.92□□□□□ -0.5
LINC00517-201ENST00000553396 WTAPQ15007 396 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 SART3Q15020 963 aaKnown RBP11.92□□□□□ -0.5
LINC00517-201ENST00000553396 TMEM67Q5HYA8 995 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 GJC2Q5T442 439 aaPredicted RBP11.92□□□□□ -0.5
LINC00517-201ENST00000553396 CREB3L3Q68CJ9 461 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 ARMCX2Q7L311 632 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 ADGRF4Q8IZF3 695 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 STAG2Q8N3U4 1231 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 MSL3Q8N5Y2 521 aaKnown RBP11.92□□□□□ -0.5
LINC00517-201ENST00000553396 FAM133AQ8N9E0 248 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 VAT1LQ9HCJ6 419 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.92□□□□□ -0.5
LINC00517-201ENST00000553396 CYP39A1Q9NYL5 469 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 NRBP1Q9UHY1 535 aa11.92□□□□□ -0.5
LINC00517-201ENST00000553396 DDX49Q9Y6V7 483 aaKnown RBP11.92□□□□□ -0.5
LINC00517-201ENST00000553396 WDR19Q8NEZ3 1342 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 SYNGAP1Q96PV0 1343 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 PTPDC1A2A3K4 754 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 SOWAHBA6NEL2 793 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 EVI5O60447 810 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 RARBP10826 455 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 BAATQ14032 418 aaPredicted RBP11.91□□□□□ -0.5
LINC00517-201ENST00000553396 COL9A3Q14050 684 aaPredicted RBP11.91□□□□□ -0.5
LINC00517-201ENST00000553396 NECTIN1Q15223 517 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 MAMDC4Q6UXC1 1216 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 SLC30A10Q6XR72 485 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 ZNF467Q7Z7K2 595 aaPredicted RBP11.91□□□□□ -0.5
LINC00517-201ENST00000553396 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 PURBQ96QR8 312 aaKnown RBP11.91□□□□□ -0.5
LINC00517-201ENST00000553396 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
LINC00517-201ENST00000553396 PPP4R2Q9NY27 417 aa11.91□□□□□ -0.5
LINC00517-201ENST00000553396 ASTN1O14525 1302 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 DNM1LO00429 736 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 PRC1O43663 620 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 PGK1P00558 417 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 COL6A1P12109 1028 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 AKR1A1P14550 325 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 CALML3P27482 149 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 GRM4Q14833 912 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 QRICH1Q2TAL8 776 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 RNF20Q5VTR2 975 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 NUP133Q8WUM0 1156 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 CLEC4DQ8WXI8 215 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 MYL10Q9BUA6 226 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 SENP6Q9GZR1 1112 aaPredicted RBP11.9□□□□□ -0.5
LINC00517-201ENST00000553396 JMJD4Q9H9V9 463 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 XPNPEP3Q9NQH7 507 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 MAD2L2Q9UI95 211 aa11.9□□□□□ -0.5
LINC00517-201ENST00000553396 TRIOBPQ9H2D6 2365 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 PALM3A6NDB9 673 aaPredicted RBP11.89□□□□□ -0.51
LINC00517-201ENST00000553396 KBTBD13C9JR72 458 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 KLRF2D3W0D1 207 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 GABBR2O75899 941 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 MCM5P33992 734 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 ACVR2BQ13705 512 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 RNF207Q6ZRF8 634 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 EEPD1Q7L9B9 569 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 CATIPQ7Z7H3 387 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 HOMER1Q86YM7 354 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 ARRDC4Q8NCT1 418 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 IGDCC4Q8TDY8 1250 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 LRRC2Q9BYS8 371 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 ABHD16BQ9H3Z7 469 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 FAM184BQ9ULE4 1060 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 NR2E3Q9Y5X4 410 aa11.89□□□□□ -0.51
LINC00517-201ENST00000553396 ASB14A6NK59 587 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 SH2B2O14492 632 aaPredicted RBP11.88□□□□□ -0.51
LINC00517-201ENST00000553396 ADCY6O43306 1168 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
LINC00517-201ENST00000553396 RPS6P62753 249 aaKnown RBP11.88□□□□□ -0.51
LINC00517-201ENST00000553396 TROAPQ12815 778 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 LRRC41Q15345 812 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 LRRC26Q2I0M4 334 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 CCDC144BQ3MJ40 725 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 NFXL1Q6ZNB6 911 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 FBXO11Q86XK2 927 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 FBXO16Q8IX29 292 aaPredicted RBP11.88□□□□□ -0.51
LINC00517-201ENST00000553396 RASEFQ8IZ41 740 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 ZNF654Q8IZM8 581 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 TCEANC2Q96MN5 208 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 KATNBL1Q9H079 304 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 PCDH10Q9P2E7 1040 aa11.88□□□□□ -0.51
LINC00517-201ENST00000553396 ABCB11O95342 1321 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 SYNRGQ9UMZ2 1314 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.87□□□□□ -0.51
LINC00517-201ENST00000553396 MYADML2A6NDP7 307 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 ADAMTS4O75173 837 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 RXRAP19793 462 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms