RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 LY9Q9HBG7 655 aa21.93■■□□□ 1.1
HDAC4-217ENST00000553145 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.93■■□□□ 1.1
HDAC4-217ENST00000553145 CNPY2Q9Y2B0 182 aa21.93■■□□□ 1.1
HDAC4-217ENST00000553145 DDX49Q9Y6V7 483 aaKnown RBP21.93■■□□□ 1.1
HDAC4-217ENST00000553145 LRRC37A2A6NM11 1700 aa21.92■■□□□ 1.1
HDAC4-217ENST00000553145 PALM3A6NDB9 673 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-217ENST00000553145 BAATQ14032 418 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-217ENST00000553145 GRM4Q14833 912 aa21.92■■□□□ 1.1
HDAC4-217ENST00000553145 SLC35G1Q2M3R5 365 aa21.92■■□□□ 1.1
HDAC4-217ENST00000553145 USH1GQ495M9 461 aa21.92■■□□□ 1.1
HDAC4-217ENST00000553145 ARMCX2Q7L311 632 aa21.92■■□□□ 1.1
HDAC4-217ENST00000553145 CCDC144CPQ8IYA2 1237 aa21.92■■□□□ 1.1
HDAC4-217ENST00000553145 LENG1Q96BZ8 264 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-217ENST00000553145 JMJD4Q9H9V9 463 aa21.92■■□□□ 1.1
HDAC4-217ENST00000553145 VAT1LQ9HCJ6 419 aa21.92■■□□□ 1.1
HDAC4-217ENST00000553145 ZHX1Q9UKY1 873 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-217ENST00000553145 KLRF2D3W0D1 207 aa21.91■■□□□ 1.1
HDAC4-217ENST00000553145 TROAPQ12815 778 aa21.91■■□□□ 1.1
HDAC4-217ENST00000553145 QRICH1Q2TAL8 776 aa21.91■■□□□ 1.1
HDAC4-217ENST00000553145 SLC30A10Q6XR72 485 aa21.91■■□□□ 1.1
HDAC4-217ENST00000553145 KATNBL1Q9H079 304 aa21.91■■□□□ 1.1
HDAC4-217ENST00000553145 PNMA2Q9UL42 364 aa21.91■■□□□ 1.1
HDAC4-217ENST00000553145 DHX16O60231 1041 aaKnown RBP21.9■■□□□ 1.1
HDAC4-217ENST00000553145 AKR1A1P14550 325 aa21.9■■□□□ 1.1
HDAC4-217ENST00000553145 MCM5P33992 734 aa21.9■■□□□ 1.1
HDAC4-217ENST00000553145 ACVR2BQ13705 512 aa21.9■■□□□ 1.1
HDAC4-217ENST00000553145 GJC2Q5T442 439 aaPredicted RBP21.9■■□□□ 1.1
HDAC4-217ENST00000553145 RASEFQ8IZ41 740 aa21.9■■□□□ 1.1
HDAC4-217ENST00000553145 PTPDC1A2A3K4 754 aa21.89■■□□□ 1.09
HDAC4-217ENST00000553145 H0YGN5 161 aa21.89■■□□□ 1.09
HDAC4-217ENST00000553145 DNM1LO00429 736 aa21.89■■□□□ 1.09
HDAC4-217ENST00000553145 SH2B2O14492 632 aaPredicted RBP21.89■■□□□ 1.09
HDAC4-217ENST00000553145 ADCY6O43306 1168 aa21.89■■□□□ 1.09
HDAC4-217ENST00000553145 RNF20Q5VTR2 975 aa21.89■■□□□ 1.09
HDAC4-217ENST00000553145 MTA3Q9BTC8 594 aa21.89■■□□□ 1.09
HDAC4-217ENST00000553145 MYL10Q9BUA6 226 aa21.89■■□□□ 1.09
HDAC4-217ENST00000553145 LRRC2Q9BYS8 371 aa21.89■■□□□ 1.09
HDAC4-217ENST00000553145 ABHD16BQ9H3Z7 469 aa21.89■■□□□ 1.09
HDAC4-217ENST00000553145 RARBP10826 455 aa21.88■■□□□ 1.09
HDAC4-217ENST00000553145 LRRC41Q15345 812 aa21.88■■□□□ 1.09
HDAC4-217ENST00000553145 CATIPQ7Z7H3 387 aa21.88■■□□□ 1.09
HDAC4-217ENST00000553145 MTMR8Q96EF0 704 aa21.88■■□□□ 1.09
HDAC4-217ENST00000553145 TMEM87BQ96K49 555 aa21.88■■□□□ 1.09
HDAC4-217ENST00000553145 XPNPEP3Q9NQH7 507 aa21.88■■□□□ 1.09
HDAC4-217ENST00000553145 ABCB11O95342 1321 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 ASB14A6NK59 587 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 CYTH3O43739 400 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 EVI5O60447 810 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 PPP1R11O60927 126 aaPredicted RBP21.87■■□□□ 1.09
HDAC4-217ENST00000553145 PGK1P00558 417 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 MYCNP04198 464 aaPredicted RBP21.87■■□□□ 1.09
HDAC4-217ENST00000553145 CALML3P27482 149 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 RPS6P62753 249 aaKnown RBP21.87■■□□□ 1.09
HDAC4-217ENST00000553145 ADCK5Q3MIX3 580 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 RNF207Q6ZRF8 634 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 FBXO11Q86XK2 927 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 ZNF654Q8IZM8 581 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 ARRDC4Q8NCT1 418 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 TBC1D5Q92609 795 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 FAM184BQ9ULE4 1060 aa21.87■■□□□ 1.09
HDAC4-217ENST00000553145 MYH6P13533 1939 aa21.86■■□□□ 1.09
HDAC4-217ENST00000553145 ALDH5A1P51649 535 aaPredicted RBP21.86■■□□□ 1.09
HDAC4-217ENST00000553145 LRRC26Q2I0M4 334 aa21.86■■□□□ 1.09
HDAC4-217ENST00000553145 CCDC144BQ3MJ40 725 aa21.86■■□□□ 1.09
HDAC4-217ENST00000553145 TSGA10IPQ3SY00 556 aa21.86■■□□□ 1.09
HDAC4-217ENST00000553145 NUP133Q8WUM0 1156 aa21.86■■□□□ 1.09
HDAC4-217ENST00000553145 NEK1Q96PY6 1258 aa21.86■■□□□ 1.09
HDAC4-217ENST00000553145 SENP6Q9GZR1 1112 aaPredicted RBP21.86■■□□□ 1.09
HDAC4-217ENST00000553145 RIOX1Q9H6W3 641 aa21.86■■□□□ 1.09
HDAC4-217ENST00000553145 ADAMTS4O75173 837 aa21.85■■□□□ 1.09
HDAC4-217ENST00000553145 DDAH1O94760 285 aa21.85■■□□□ 1.09
HDAC4-217ENST00000553145 NFXL1Q6ZNB6 911 aa21.85■■□□□ 1.09
HDAC4-217ENST00000553145 MORC4Q8TE76 937 aa21.85■■□□□ 1.09
HDAC4-217ENST00000553145 TCEANC2Q96MN5 208 aa21.85■■□□□ 1.09
HDAC4-217ENST00000553145 PIGSQ96S52 555 aa21.85■■□□□ 1.09
HDAC4-217ENST00000553145 SYNRGQ9UMZ2 1314 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.84■■□□□ 1.09
HDAC4-217ENST00000553145 KBTBD13C9JR72 458 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 OPLAHO14841 1288 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 ZBTB5O15062 677 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 RXRAP19793 462 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 LIFRP42702 1097 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 IRX5P78411 483 aaPredicted RBP21.84■■□□□ 1.09
HDAC4-217ENST00000553145 EEPD1Q7L9B9 569 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 HOMER1Q86YM7 354 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 RAB11FIP4Q86YS3 637 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 FBXO16Q8IX29 292 aaPredicted RBP21.84■■□□□ 1.09
HDAC4-217ENST00000553145 C7orf61Q8IZ16 206 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 KCNB2Q92953 911 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 AMNQ9BXJ7 453 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 NR2E3Q9Y5X4 410 aa21.84■■□□□ 1.09
HDAC4-217ENST00000553145 CCDC69A6NI79 296 aa21.83■■□□□ 1.09
HDAC4-217ENST00000553145 HSPA4P34932 840 aa21.83■■□□□ 1.09
HDAC4-217ENST00000553145 EXOSC10Q01780 885 aaKnown RBP21.83■■□□□ 1.09
HDAC4-217ENST00000553145 TMTC2Q8N394 836 aa21.83■■□□□ 1.09
HDAC4-217ENST00000553145 RGS22Q8NE09 1264 aa21.83■■□□□ 1.09
HDAC4-217ENST00000553145 MAP3K14Q99558 947 aa21.83■■□□□ 1.09
HDAC4-217ENST00000553145 PDGFCQ9NRA1 345 aa21.83■■□□□ 1.09
HDAC4-217ENST00000553145 COL20A1Q9P218 1284 aa21.83■■□□□ 1.09
HDAC4-217ENST00000553145 ADD3Q9UEY8 706 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms