RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 TRIOO75962 3097 aa10.65□□□□□ -0.7
PRKCH-203ENST00000552875 H3BNC9 293 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 DYNC1LI2O43237 492 aaPredicted RBP10.64□□□□□ -0.71
PRKCH-203ENST00000552875 IGSF3O75054 1194 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 VAMP4O75379 141 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 SDHBP21912 280 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 LTBRP36941 435 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 USP5P45974 858 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 RFX5P48382 616 aaPredicted RBP10.64□□□□□ -0.71
PRKCH-203ENST00000552875 MKRN4PQ13434 485 aaPredicted RBP10.64□□□□□ -0.71
PRKCH-203ENST00000552875 GPM6BQ13491 265 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 SEPT2Q15019 361 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 FAM47CQ5HY64 1035 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 TBC1D9Q6ZT07 1266 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 ZBTB33Q86T24 672 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 ANKRD35Q8N283 1001 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.64□□□□□ -0.71
PRKCH-203ENST00000552875 RIPOR3Q96MK2 946 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 TEX13BQ9BXU2 312 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 SEMA4AQ9H3S1 761 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 POLR3EQ9NVU0 708 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 HMG20BQ9P0W2 317 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 ADAMTS5Q9UNA0 930 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 Q9Y3F1 56 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 ATRXP46100 2492 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 PLXNA3P51805 1871 aa10.64□□□□□ -0.71
PRKCH-203ENST00000552875 DNAJC25-GNG10A0A024R161 153 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 A0A1W2PRG0 241 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 LOC730098B7Z3J9 87 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 VWA5AO00534 786 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 TIMM10P62072 90 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 DEFB103AP81534 67 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 IKBKEQ14164 716 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 CTC1Q2NKJ3 1217 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 EPC2Q52LR7 807 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 TMCO2Q7Z6W1 182 aaPredicted RBP10.63□□□□□ -0.71
PRKCH-203ENST00000552875 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 KIAA2013Q8IYS2 634 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 SPICE1Q8N0Z3 855 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 PPP2R3CQ969Q6 453 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 XAGE2Q96GT9 111 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 CHAMP1Q96JM3 812 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 DLL3Q9NYJ7 618 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 ZNF214Q9UL59 606 aaPredicted RBP10.63□□□□□ -0.71
PRKCH-203ENST00000552875 GNEQ9Y223 722 aaKnown RBP10.63□□□□□ -0.71
PRKCH-203ENST00000552875 KMT2EQ8IZD2 1858 aa10.63□□□□□ -0.71
PRKCH-203ENST00000552875 NCOR2Q9Y618 2525 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 IL16Q14005 1332 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 ICAM3P32942 547 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 CBX2Q14781 532 aaPredicted RBP10.62□□□□□ -0.71
PRKCH-203ENST00000552875 BRDTQ58F21 947 aaPredicted RBP10.62□□□□□ -0.71
PRKCH-203ENST00000552875 FAM117BQ6P1L5 589 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 TMEM179Q6ZVK1 233 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 CAGE1Q8TC20 777 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 AFAP1L1Q8TED9 768 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 HINFPQ9BQA5 517 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 VCPKMTQ9H867 229 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 FBXO40Q9UH90 709 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 CTDP1Q9Y5B0 961 aaPredicted RBP10.62□□□□□ -0.71
PRKCH-203ENST00000552875 TPRP12270 2363 aaKnown RBP10.62□□□□□ -0.71
PRKCH-203ENST00000552875 GVINP1Q7Z2Y8 2422 aa10.62□□□□□ -0.71
PRKCH-203ENST00000552875 SIPA1L1O43166 1804 aa10.61□□□□□ -0.71
PRKCH-203ENST00000552875 ASB14A6NK59 587 aa10.61□□□□□ -0.71
PRKCH-203ENST00000552875 LMNAP02545 664 aaKnown RBP10.61□□□□□ -0.71
PRKCH-203ENST00000552875 GUCY1A2P33402 732 aa10.61□□□□□ -0.71
PRKCH-203ENST00000552875 NDUFV1P49821 464 aa10.61□□□□□ -0.71
PRKCH-203ENST00000552875 CPT1AP50416 773 aa10.61□□□□□ -0.71
PRKCH-203ENST00000552875 PTPN11Q06124 597 aaPredicted RBP10.61□□□□□ -0.71
PRKCH-203ENST00000552875 PTPN21Q16825 1174 aa10.61□□□□□ -0.71
PRKCH-203ENST00000552875 SNRNP48Q6IEG0 339 aaKnown RBP10.61□□□□□ -0.71
PRKCH-203ENST00000552875 NFRKBQ6P4R8 1299 aa10.61□□□□□ -0.71
PRKCH-203ENST00000552875 NEUROD6Q96NK8 337 aa10.61□□□□□ -0.71
PRKCH-203ENST00000552875 PPP1R9AQ9ULJ8 1098 aa10.61□□□□□ -0.71
PRKCH-203ENST00000552875 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
PRKCH-203ENST00000552875 ASTN1O14525 1302 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 CFAP47Q6ZTR5 3102 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 ACACBO00763 2458 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.6□□□□□ -0.71
PRKCH-203ENST00000552875 EYA4O95677 639 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 AMHP03971 560 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 UQCRFS1P1P0C7P4 283 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 SHMT1P34896 483 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 KIAA0319Q5VV43 1072 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 IQSEC1Q6DN90 963 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 MTG1Q9BT17 334 aaPredicted RBP10.6□□□□□ -0.71
PRKCH-203ENST00000552875 PHF7Q9BWX1 381 aaPredicted RBP10.6□□□□□ -0.71
PRKCH-203ENST00000552875 LMAN2LQ9H0V9 348 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 HDAC5Q9UQL6 1122 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 TMX2Q9Y320 296 aa10.6□□□□□ -0.71
PRKCH-203ENST00000552875 FANCIQ9NVI1 1328 aa10.59□□□□□ -0.71
PRKCH-203ENST00000552875 CACNA1FO60840 1977 aa10.59□□□□□ -0.71
PRKCH-203ENST00000552875 POLR3DP05423 398 aaPredicted RBP10.59□□□□□ -0.71
PRKCH-203ENST00000552875 SLC4A3P48751 1232 aa10.59□□□□□ -0.71
PRKCH-203ENST00000552875 ICA1Q05084 483 aa10.59□□□□□ -0.71
PRKCH-203ENST00000552875 DLX2Q07687 328 aaPredicted RBP10.59□□□□□ -0.71
PRKCH-203ENST00000552875 HYAL1Q12794 435 aa10.59□□□□□ -0.71
PRKCH-203ENST00000552875 PI16Q6UXB8 463 aa10.59□□□□□ -0.71
PRKCH-203ENST00000552875 FBXO11Q86XK2 927 aa10.59□□□□□ -0.71
PRKCH-203ENST00000552875 TMEM192Q8IY95 271 aa10.59□□□□□ -0.71
PRKCH-203ENST00000552875 RPGRIP1Q96KN7 1286 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms