RNA–Protein interactions for RNA: ENST00000552240.6

PRICKLE1-209, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-209ENST00000552240 TBC1D10BQ4KMP7 808 aaPredicted RBP13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 C4orf32Q8N8J7 132 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 QTRT2Q9H974 415 aaKnown RBP13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 TCP11L1Q9NUJ3 509 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 SMARCAL1Q9NZC9 954 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 ADGRG1Q9Y653 693 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 CACNA1SQ13698 1873 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 CEP350Q5VT06 3117 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 TBX2Q13207 712 aaPredicted RBP13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 TCP11X2Q5H9J9 407 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 IRF2BP1Q8IU81 584 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 CDK5RAP3Q96JB5 506 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 BARHL2Q9NY43 387 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 MYH6P13533 1939 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 MFAP3LO75121 409 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 CHRNA5P30532 468 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 RHBDL3P58872 404 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 RNASE9P60153 205 aaKnown RBP13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 NT5DC1Q5TFE4 455 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 ANKRD40Q6AI12 368 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 SH3RF1Q7Z6J0 888 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 CALML3P27482 149 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 GRM4Q14833 912 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 SYCP1Q15431 976 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 MMRN2Q9H8L6 949 aa13.73□□□□□ -0.21
PRICKLE1-209ENST00000552240 RBAK-RBAKDNI3L0D1 243 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 STX10O60499 249 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 CXCR5P32302 372 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 NONOQ15233 471 aaKnown RBP eCLIP13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 IKZF4Q9H2S9 585 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 NLRC4Q9NPP4 1024 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 ERCC5P28715 1186 aaPredicted RBP13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 HOXA13P31271 388 aaPredicted RBP13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 TBC1D8BQ0IIM8 1120 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 GSPT2Q8IYD1 628 aaKnown RBP13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 SPATA20Q8TB22 786 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 NOC3LQ8WTT2 800 aaKnown RBP13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 DDX41Q9UJV9 622 aaKnown RBP13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 CHD4Q14839 1912 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 COL14A1Q05707 1796 aaKnown RBP13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 LDHCP07864 332 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 CYP4A11Q02928 519 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 FGFBP2Q9BYJ0 223 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 EXOC1Q9NV70 894 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 PKD2L1Q9P0L9 805 aa13.72□□□□□ -0.21
PRICKLE1-209ENST00000552240 ZNF185O15231 689 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 TPM1P09493 284 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 OR52Z1P0C646 297 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 FAM193AP78312 1265 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 TMC4Q7Z404 712 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 SNX29Q8TEQ0 813 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 PARD6BQ9BYG5 372 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 ABHD10Q9NUJ1 306 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 LRWD1Q9UFC0 647 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 LEMD3Q9Y2U8 911 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 DUOX1Q9NRD9 1551 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 NHSL1Q5SYE7 1610 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 PALM3A6NDB9 673 aaPredicted RBP13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 EPHB6O15197 1021 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 KIF5CO60282 957 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 SASH3O75995 380 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 FGRP09769 529 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 PDHBP11177 359 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 ECM1Q16610 540 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 SBK1Q52WX2 424 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 ZNF658Q5TYW1 1059 aaPredicted RBP13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 TMCO3Q6UWJ1 677 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 FCHSD1Q86WN1 690 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 SH2D3AQ9BRG2 576 aa13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 MAGEC2Q9UBF1 373 aaPredicted RBP13.71□□□□□ -0.21
PRICKLE1-209ENST00000552240 CLRN2A0PK11 232 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 SFI1A8K8P3 1242 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 SEMA3EO15041 775 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 MMP10P09238 476 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 CDKAL1Q5VV42 579 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 NEK8Q86SG6 692 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 PROM2Q8N271 834 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 RGS22Q8NE09 1264 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 EHD2Q9NZN4 543 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 ANKRD36CQ5JPF3 1778 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 VGLL3A8MV65 326 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 E9PMD0 336 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 PPP1R11O60927 126 aaPredicted RBP13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 CALCRLQ16602 461 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 CCDC93Q567U6 631 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 ANKRD20A12PQ8NF67 263 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 TUBGCP2Q9BSJ2 902 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 TRIM34Q9BYJ4 488 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 PDGFDQ9GZP0 370 aaPredicted RBP13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 L2HGDHQ9H9P8 463 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 C6orf50Q9HD87 102 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 TADA3O75528 432 aa13.7□□□□□ -0.22
PRICKLE1-209ENST00000552240 NAP1L1P55209 391 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms