RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	DUSP11	O75319	330 aa	Known RBP	11.32	□□□□□ -0.6
PFKM-222	ENST00000551339	CCDC144B	Q3MJ40	725 aa		11.32	□□□□□ -0.6
PFKM-222	ENST00000551339	TRIM60	Q495X7	471 aa		11.32	□□□□□ -0.6
PFKM-222	ENST00000551339	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.32	□□□□□ -0.6
PFKM-222	ENST00000551339	CASC1	Q6TDU7	716 aa		11.32	□□□□□ -0.6
PFKM-222	ENST00000551339	IQCA1	Q86XH1	822 aa		11.32	□□□□□ -0.6
PFKM-222	ENST00000551339	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.32	□□□□□ -0.6
PFKM-222	ENST00000551339	TSEN34	Q9BSV6	310 aa	Known RBP	11.32	□□□□□ -0.6
PFKM-222	ENST00000551339	ATP11B	Q9Y2G3	1177 aa		11.32	□□□□□ -0.6
PFKM-222	ENST00000551339	SYNRG	Q9UMZ2	1314 aa		11.32	□□□□□ -0.6
PFKM-222	ENST00000551339	RANBP2	P49792	3224 aa	Known RBP	11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	ASB14	A6NK59	587 aa		11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	SOX1	O00570	391 aa	Predicted RBP	11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	CDC45	O75419	566 aa		11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	CYP21A2	P08686	494 aa		11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	GOLGA8H	P0CJ92	632 aa		11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	ACLY	P53396	1101 aa		11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	IRX5	P78411	483 aa	Predicted RBP	11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	MDM2	Q00987	491 aa	Predicted RBP	11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	BAAT	Q14032	418 aa	Predicted RBP	11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	KCNA10	Q16322	511 aa		11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	GPATCH4	Q5T3I0	446 aa	Known RBP	11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	ENAH	Q8N8S7	591 aa	Predicted RBP	11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	CLEC4D	Q8WXI8	215 aa		11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	PURB	Q96QR8	312 aa	Known RBP	11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	UBE2O	Q9C0C9	1292 aa	Known RBP	11.31	□□□□□ -0.6
PFKM-222	ENST00000551339	DDX49	Q9Y6V7	483 aa	Known RBP	11.31	□□□□□ -0.6
PFKM-222	ENST00000551339		A0A1W2PQ45	241 aa	Predicted RBP	11.3	□□□□□ -0.6
PFKM-222	ENST00000551339		A0A1W2PQY0	241 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	MYADML2	A6NDP7	307 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	NFIB	O00712	420 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	CST5	P28325	142 aa	Predicted RBP	11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	GJA9	P57773	515 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	NKX3-2	P78367	333 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	TLE2	Q04725	743 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	TRDN	Q13061	729 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	NSMF	Q6X4W1	530 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	TDH	Q8IZJ6	230 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	PNMA1	Q8ND90	353 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	MORC4	Q8TE76	937 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	UBA5	Q9GZZ9	404 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	LSG1	Q9H089	658 aa	Known RBP	11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	UPF3A	Q9H1J1	476 aa	Known RBP	11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	CPVL	Q9H3G5	476 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	KAT14	Q9H8E8	782 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	PNMA2	Q9UL42	364 aa		11.3	□□□□□ -0.6
PFKM-222	ENST00000551339	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	TRIM43B	A6NCK2	446 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	MOXD2P	A6NHM9	499 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	CTAGE5	O15320	804 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	TNFAIP2	Q03169	654 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	LRIT3	Q3SXY7	679 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	TAPT1	Q6NXT6	567 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	CYB5R4	Q7L1T6	521 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	SH3RF1	Q7Z6J0	888 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	LRCH3	Q96II8	777 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	PDGFC	Q9NRA1	345 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	PRKAG2	Q9UGJ0	569 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	GNE	Q9Y223	722 aa	Known RBP	11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	RBM8A	Q9Y5S9	174 aa	Known RBP	11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	TNKS	O95271	1327 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339	WDR19	Q8NEZ3	1342 aa		11.29	□□□□□ -0.6
PFKM-222	ENST00000551339		E7EWF7	191 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	ASGR1	P07306	291 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	C6orf222	P0C671	652 aa	Predicted RBP	11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	SMPD1	P17405	629 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	NECTIN1	Q15223	517 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	SEC23A	Q15436	765 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	GNAS	Q5JWF2	1037 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	TMEM63B	Q5T3F8	832 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	IQSEC1	Q6DN90	963 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	RNF207	Q6ZRF8	634 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	EEPD1	Q7L9B9	569 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	ANKRD33	Q7Z3H0	272 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	ADGRF4	Q8IZF3	695 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	PCSK9	Q8NBP7	692 aa	Known RBP	11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	NCOA7	Q8NI08	942 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	NUP133	Q8WUM0	1156 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	UBAC1	Q9BSL1	405 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	SPC25	Q9HBM1	224 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	ANO2	Q9NQ90	1003 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	STARD7	Q9NQZ5	370 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	PDLIM7	Q9NR12	457 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	ADD3	Q9UEY8	706 aa	Known RBP	11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	ELP1	O95163	1332 aa		11.28	□□□□□ -0.6
PFKM-222	ENST00000551339	LOC102724159	A0A0B4J2E5	919 aa		11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	PTPDC1	A2A3K4	754 aa		11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	PQBP1	O60828	265 aa	Known RBP	11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	PARP1	P09874	1014 aa	Known RBP	11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	PTGS1	P23219	599 aa		11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	ITGB8	P26012	769 aa		11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	CALML3	P27482	149 aa		11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	CDK7	P50613	346 aa		11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	ALDH5A1	P51649	535 aa	Predicted RBP	11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	RPS6	P62753	249 aa	Known RBP	11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	BEX3	Q00994	111 aa		11.27	□□□□□ -0.61
PFKM-222	ENST00000551339	PWP2	Q15269	919 aa	Known RBP	11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms