RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 FGD4Q96M96 766 aa23.81■■□□□ 1.4
SLC48A1-208ENST00000551301 GLT1D1Q96MS3 346 aa23.81■■□□□ 1.4
SLC48A1-208ENST00000551301 MPHOSPH6Q99547 160 aaKnown RBP23.81■■□□□ 1.4
SLC48A1-208ENST00000551301 ZKSCAN3Q9BRR0 538 aa23.81■■□□□ 1.4
SLC48A1-208ENST00000551301 UBAC1Q9BSL1 405 aa23.81■■□□□ 1.4
SLC48A1-208ENST00000551301 RAD50Q92878 1312 aa23.81■■□□□ 1.4
SLC48A1-208ENST00000551301 LAMA4Q16363 1823 aa23.8■■□□□ 1.4
SLC48A1-208ENST00000551301 MCM3APO60318 1980 aa23.8■■□□□ 1.4
SLC48A1-208ENST00000551301 TLE2Q04725 743 aa23.8■■□□□ 1.4
SLC48A1-208ENST00000551301 KCNA10Q16322 511 aa23.8■■□□□ 1.4
SLC48A1-208ENST00000551301 VTI1AQ96AJ9 217 aa23.8■■□□□ 1.4
SLC48A1-208ENST00000551301 ZSCAN10Q96SZ4 725 aaPredicted RBP23.8■■□□□ 1.4
SLC48A1-208ENST00000551301 SOWAHBA6NEL2 793 aa23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 DCDC2CA8MYV0 355 aa23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 B4E1Z4 1266 aa23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 CST5P28325 142 aaPredicted RBP23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 TNFAIP2Q03169 654 aa23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 TRDNQ13061 729 aa23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 GNASQ5JWF2 1037 aa23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 GPR153Q6NV75 609 aa23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 PNMA1Q8ND90 353 aa23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 KLHDC9Q8NEP7 349 aa23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 AP5M1Q9H0R1 490 aa23.79■■□□□ 1.4
SLC48A1-208ENST00000551301 PTPDC1A2A3K4 754 aa23.78■■□□□ 1.4
SLC48A1-208ENST00000551301 PQBP1O60828 265 aaKnown RBP23.78■■□□□ 1.4
SLC48A1-208ENST00000551301 CLTBP09497 229 aa23.78■■□□□ 1.4
SLC48A1-208ENST00000551301 SNHG28P0DPA3 235 aa23.78■■□□□ 1.4
SLC48A1-208ENST00000551301 PDE4AP27815 886 aa23.78■■□□□ 1.4
SLC48A1-208ENST00000551301 GJA9P57773 515 aa23.78■■□□□ 1.4
SLC48A1-208ENST00000551301 LOC102724159A0A0B4J2E5 919 aa23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 B4DLN1 442 aa23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 SOX1O00570 391 aaPredicted RBP23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 MRPL12P52815 198 aaKnown RBP23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 BAATQ14032 418 aaPredicted RBP23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 PWP2Q15269 919 aaKnown RBP23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 LRCH3Q96II8 777 aa23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 UPF3AQ9H1J1 476 aaKnown RBP23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 PDLIM7Q9NR12 457 aa23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 ZSWIM5Q9P217 1185 aa23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 ELP1O95163 1332 aa23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 MROH7Q68CQ1 1323 aa23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 WDR19Q8NEZ3 1342 aa23.77■■□□□ 1.4
SLC48A1-208ENST00000551301 GSPT1P15170 499 aaKnown RBP23.76■■□□□ 1.39
SLC48A1-208ENST00000551301 ASPRV1Q53RT3 343 aa23.76■■□□□ 1.39
SLC48A1-208ENST00000551301 IQSEC1Q6DN90 963 aa23.76■■□□□ 1.39
SLC48A1-208ENST00000551301 RNF207Q6ZRF8 634 aa23.76■■□□□ 1.39
SLC48A1-208ENST00000551301 ANKS1AQ92625 1134 aa23.76■■□□□ 1.39
SLC48A1-208ENST00000551301 TOX2Q96NM4 488 aa23.76■■□□□ 1.39
SLC48A1-208ENST00000551301 VTA1Q9NP79 307 aa23.76■■□□□ 1.39
SLC48A1-208ENST00000551301 U3KPZ7 1027 aaPredicted RBP23.76■■□□□ 1.39
SLC48A1-208ENST00000551301 DHX16O60231 1041 aaKnown RBP23.75■■□□□ 1.39
SLC48A1-208ENST00000551301 ZEB2O60315 1214 aa23.75■■□□□ 1.39
SLC48A1-208ENST00000551301 ASGR1P07306 291 aa23.75■■□□□ 1.39
SLC48A1-208ENST00000551301 ENAHQ8N8S7 591 aaPredicted RBP23.75■■□□□ 1.39
SLC48A1-208ENST00000551301 KATNBL1Q9H079 304 aa23.75■■□□□ 1.39
SLC48A1-208ENST00000551301 TMEM39AQ9NV64 488 aa23.75■■□□□ 1.39
SLC48A1-208ENST00000551301 TNKSO95271 1327 aa23.75■■□□□ 1.39
SLC48A1-208ENST00000551301 NFIBO00712 420 aa23.74■■□□□ 1.39
SLC48A1-208ENST00000551301 PARP1P09874 1014 aaKnown RBP23.74■■□□□ 1.39
SLC48A1-208ENST00000551301 GOLGA8HP0CJ92 632 aa23.74■■□□□ 1.39
SLC48A1-208ENST00000551301 RAG1P15918 1043 aa23.74■■□□□ 1.39
SLC48A1-208ENST00000551301 CALML3P27482 149 aa23.74■■□□□ 1.39
SLC48A1-208ENST00000551301 IFIT1BQ5T764 474 aaKnown RBP23.74■■□□□ 1.39
SLC48A1-208ENST00000551301 CCSAPQ6IQ19 270 aaPredicted RBP23.74■■□□□ 1.39
SLC48A1-208ENST00000551301 EEPD1Q7L9B9 569 aa23.74■■□□□ 1.39
SLC48A1-208ENST00000551301 ANKRD33Q7Z3H0 272 aa23.74■■□□□ 1.39
SLC48A1-208ENST00000551301 BADQ92934 168 aa23.74■■□□□ 1.39
SLC48A1-208ENST00000551301 A0A0U1RQG5 324 aaPredicted RBP23.73■■□□□ 1.39
SLC48A1-208ENST00000551301 CABYRO75952 493 aa23.73■■□□□ 1.39
SLC48A1-208ENST00000551301 CHMLP26374 656 aa23.73■■□□□ 1.39
SLC48A1-208ENST00000551301 TLK2Q86UE8 772 aa23.73■■□□□ 1.39
SLC48A1-208ENST00000551301 UBA5Q9GZZ9 404 aa23.73■■□□□ 1.39
SLC48A1-208ENST00000551301 MAF1Q9H063 256 aa23.73■■□□□ 1.39
SLC48A1-208ENST00000551301 Q9Y3F1 56 aa23.73■■□□□ 1.39
SLC48A1-208ENST00000551301 TRIM43BA6NCK2 446 aa23.72■■□□□ 1.39
SLC48A1-208ENST00000551301 MYADML2A6NDP7 307 aa23.72■■□□□ 1.39
SLC48A1-208ENST00000551301 ADCY6O43306 1168 aa23.72■■□□□ 1.39
SLC48A1-208ENST00000551301 ALDH5A1P51649 535 aaPredicted RBP23.72■■□□□ 1.39
SLC48A1-208ENST00000551301 USH1GQ495M9 461 aa23.72■■□□□ 1.39
SLC48A1-208ENST00000551301 KIAA1211Q6ZU35 1233 aa23.72■■□□□ 1.39
SLC48A1-208ENST00000551301 FBXO16Q8IX29 292 aaPredicted RBP23.72■■□□□ 1.39
SLC48A1-208ENST00000551301 MORC4Q8TE76 937 aa23.72■■□□□ 1.39
SLC48A1-208ENST00000551301 TRIM43Q96BQ3 446 aaPredicted RBP23.72■■□□□ 1.39
SLC48A1-208ENST00000551301 SZT2Q5T011 3432 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 ABCB11O95342 1321 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 ERICH2A1L162 156 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 KIAA0355O15063 1070 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 TLR3O15455 904 aaKnown RBP23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 DYNC1LI2O43237 492 aaPredicted RBP23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 NKX3-2P78367 333 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 PDE4DQ08499 809 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 SART3Q15020 963 aaKnown RBP23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 FSCN1Q16658 493 aaKnown RBP23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 SH3RF1Q7Z6J0 888 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 RALYLQ86SE5 291 aaKnown RBP23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 RGS22Q8NE09 1264 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 DNERQ8NFT8 737 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 CLEC4DQ8WXI8 215 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 SEZ6LQ9BYH1 1024 aa23.71■■□□□ 1.39
SLC48A1-208ENST00000551301 ASTN1O14525 1302 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms