RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 STOX1Q6ZVD7 989 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 DGKHQ86XP1 1220 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 CCDC144CPQ8IYA2 1237 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 ARRDC4Q8NCT1 418 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 KLHDC9Q8NEP7 349 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 CCPG1Q9ULG6 757 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 PHF24Q9UPV7 400 aa15.32■□□□□ 0.04
NPAS3-209ENST00000551008 POTEB2H3BUK9 544 aa15.31■□□□□ 0.04
NPAS3-209ENST00000551008 SOX1O00570 391 aaPredicted RBP15.31■□□□□ 0.04
NPAS3-209ENST00000551008 RARBP10826 455 aa15.31■□□□□ 0.04
NPAS3-209ENST00000551008 ACVR2BQ13705 512 aa15.31■□□□□ 0.04
NPAS3-209ENST00000551008 COL9A3Q14050 684 aaPredicted RBP15.31■□□□□ 0.04
NPAS3-209ENST00000551008 IMMTQ16891 758 aaKnown RBP15.31■□□□□ 0.04
NPAS3-209ENST00000551008 SLC39A5Q6ZMH5 540 aa15.31■□□□□ 0.04
NPAS3-209ENST00000551008 PNMA1Q8ND90 353 aa15.31■□□□□ 0.04
NPAS3-209ENST00000551008 FERMT2Q96AC1 680 aa15.31■□□□□ 0.04
NPAS3-209ENST00000551008 ZSCAN10Q96SZ4 725 aaPredicted RBP15.31■□□□□ 0.04
NPAS3-209ENST00000551008 ZHX1Q9UKY1 873 aaPredicted RBP15.31■□□□□ 0.04
NPAS3-209ENST00000551008 CNPY2Q9Y2B0 182 aa15.31■□□□□ 0.04
NPAS3-209ENST00000551008 TNKSO95271 1327 aa15.31■□□□□ 0.04
NPAS3-209ENST00000551008 LAMA2P24043 3122 aaKnown RBP15.3■□□□□ 0.04
NPAS3-209ENST00000551008 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.3■□□□□ 0.04
NPAS3-209ENST00000551008 KBTBD13C9JR72 458 aa15.3■□□□□ 0.04
NPAS3-209ENST00000551008 BMP8BP34820 402 aa15.3■□□□□ 0.04
NPAS3-209ENST00000551008 SLC35G1Q2M3R5 365 aa15.3■□□□□ 0.04
NPAS3-209ENST00000551008 CCDC144BQ3MJ40 725 aa15.3■□□□□ 0.04
NPAS3-209ENST00000551008 TMEM63BQ5T3F8 832 aa15.3■□□□□ 0.04
NPAS3-209ENST00000551008 MORC4Q8TE76 937 aa15.3■□□□□ 0.04
NPAS3-209ENST00000551008 UBA5Q9GZZ9 404 aa15.3■□□□□ 0.04
NPAS3-209ENST00000551008 UPF3AQ9H1J1 476 aaKnown RBP15.3■□□□□ 0.04
NPAS3-209ENST00000551008 SENP2Q9HC62 589 aa15.3■□□□□ 0.04
NPAS3-209ENST00000551008 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
NPAS3-209ENST00000551008 KIAA1217Q5T5P2 1943 aa15.29■□□□□ 0.04
NPAS3-209ENST00000551008 WDR19Q8NEZ3 1342 aa15.29■□□□□ 0.04
NPAS3-209ENST00000551008 NT5C2P49902 561 aa15.29■□□□□ 0.04
NPAS3-209ENST00000551008 TRIM60Q495X7 471 aa15.29■□□□□ 0.04
NPAS3-209ENST00000551008 SLC30A10Q6XR72 485 aa15.29■□□□□ 0.04
NPAS3-209ENST00000551008 IQCA1Q86XH1 822 aa15.29■□□□□ 0.04
NPAS3-209ENST00000551008 ABHD16BQ9H3Z7 469 aa15.29■□□□□ 0.04
NPAS3-209ENST00000551008 FAM184BQ9ULE4 1060 aa15.29■□□□□ 0.04
NPAS3-209ENST00000551008 A0A1W2PPC1 479 aa15.28■□□□□ 0.04
NPAS3-209ENST00000551008 A0A1W2PQ45 241 aaPredicted RBP15.28■□□□□ 0.04
NPAS3-209ENST00000551008 A0A1W2PQY0 241 aa15.28■□□□□ 0.04
NPAS3-209ENST00000551008 DUSP11O75319 330 aaKnown RBP15.28■□□□□ 0.04
NPAS3-209ENST00000551008 CST5P28325 142 aaPredicted RBP15.28■□□□□ 0.04
NPAS3-209ENST00000551008 ANTXR2P58335 489 aa15.28■□□□□ 0.04
NPAS3-209ENST00000551008 NKX3-2P78367 333 aa15.28■□□□□ 0.04
NPAS3-209ENST00000551008 BAATQ14032 418 aaPredicted RBP15.28■□□□□ 0.04
NPAS3-209ENST00000551008 GPATCH4Q5T3I0 446 aaKnown RBP15.28■□□□□ 0.04
NPAS3-209ENST00000551008 C1orf53Q5VUE5 145 aa15.28■□□□□ 0.04
NPAS3-209ENST00000551008 TAPT1Q6NXT6 567 aa15.28■□□□□ 0.04
NPAS3-209ENST00000551008 NSMFQ6X4W1 530 aa15.28■□□□□ 0.04
NPAS3-209ENST00000551008 STAG2Q8N3U4 1231 aa15.28■□□□□ 0.04
NPAS3-209ENST00000551008 KRT23Q9C075 422 aa15.28■□□□□ 0.04
NPAS3-209ENST00000551008 PDGFCQ9NRA1 345 aa15.28■□□□□ 0.04
NPAS3-209ENST00000551008 GJA9P57773 515 aa15.27■□□□□ 0.04
NPAS3-209ENST00000551008 MDM2Q00987 491 aaPredicted RBP15.27■□□□□ 0.04
NPAS3-209ENST00000551008 SH3RF1Q7Z6J0 888 aa15.27■□□□□ 0.04
NPAS3-209ENST00000551008 MAP4K1Q92918 833 aa15.27■□□□□ 0.04
NPAS3-209ENST00000551008 KAT14Q9H8E8 782 aa15.27■□□□□ 0.04
NPAS3-209ENST00000551008 CNNM2Q9H8M5 875 aa15.27■□□□□ 0.04
NPAS3-209ENST00000551008 PDLIM7Q9NR12 457 aa15.27■□□□□ 0.04
NPAS3-209ENST00000551008 GNEQ9Y223 722 aaKnown RBP15.27■□□□□ 0.04
NPAS3-209ENST00000551008 ATP11BQ9Y2G3 1177 aa15.27■□□□□ 0.04
NPAS3-209ENST00000551008 E7EWF7 191 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 ITGB8P26012 769 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 ALDH5A1P51649 535 aaPredicted RBP15.26■□□□□ 0.03
NPAS3-209ENST00000551008 ACLYP53396 1101 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 KCNA10Q16322 511 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 CCDC178Q5BJE1 867 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 RNF180Q86T96 592 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 FBXO16Q8IX29 292 aaPredicted RBP15.26■□□□□ 0.03
NPAS3-209ENST00000551008 ADGRF4Q8IZF3 695 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 RUFY2Q8WXA3 655 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 TBC1D5Q92609 795 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 LRCH3Q96II8 777 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 TSEN34Q9BSV6 310 aaKnown RBP15.26■□□□□ 0.03
NPAS3-209ENST00000551008 LSG1Q9H089 658 aaKnown RBP15.26■□□□□ 0.03
NPAS3-209ENST00000551008 JMJD4Q9H9V9 463 aa15.26■□□□□ 0.03
NPAS3-209ENST00000551008 RBM8AQ9Y5S9 174 aaKnown RBP15.26■□□□□ 0.03
NPAS3-209ENST00000551008 TRIM43BA6NCK2 446 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 ASB14A6NK59 587 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 OPLAHO14841 1288 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 PPP1R11O60927 126 aaPredicted RBP15.25■□□□□ 0.03
NPAS3-209ENST00000551008 SMPD1P17405 629 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 TLE2Q04725 743 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 CDC37Q16543 378 aaPredicted RBP15.25■□□□□ 0.03
NPAS3-209ENST00000551008 ASPRV1Q53RT3 343 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 MB21D2Q8IYB1 491 aaPredicted RBP15.25■□□□□ 0.03
NPAS3-209ENST00000551008 TRIM43Q96BQ3 446 aaPredicted RBP15.25■□□□□ 0.03
NPAS3-209ENST00000551008 MTMR8Q96EF0 704 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 ESYT1Q9BSJ8 1104 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 COL20A1Q9P218 1284 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 MAD2L2Q9UI95 211 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 SCN10AQ9Y5Y9 1956 aa15.25■□□□□ 0.03
NPAS3-209ENST00000551008 EDNRBP24530 442 aa15.24■□□□□ 0.03
NPAS3-209ENST00000551008 RPS6P62753 249 aaKnown RBP15.24■□□□□ 0.03
NPAS3-209ENST00000551008 BEX3Q00994 111 aa15.24■□□□□ 0.03
NPAS3-209ENST00000551008 QRICH1Q2TAL8 776 aa15.24■□□□□ 0.03
NPAS3-209ENST00000551008 USH1GQ495M9 461 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms