RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 MYH7P12883 1935 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 GREB1LQ9C091 1923 aaPredicted RBP14.59□□□□□ -0.07
DDX54-206ENST00000549271 ATP2A1O14983 1001 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 PRKAB2O43741 272 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 MBD4O95243 580 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 EEF2P13639 858 aaKnown RBP14.59□□□□□ -0.07
DDX54-206ENST00000549271 FAM83BQ5T0W9 1011 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 FAM178BQ8IXR5 827 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 GJD3Q8N144 294 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 SLC9A7Q96T83 725 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 LRRCC1Q9C099 1032 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 GNEQ9Y223 722 aaKnown RBP14.59□□□□□ -0.07
DDX54-206ENST00000549271 USP34Q70CQ2 3546 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 TANC1Q9C0D5 1861 aa14.59□□□□□ -0.07
DDX54-206ENST00000549271 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.58□□□□□ -0.08
DDX54-206ENST00000549271 CDK8P49336 464 aa14.58□□□□□ -0.08
DDX54-206ENST00000549271 ZSCAN25Q6NSZ9 544 aa14.58□□□□□ -0.08
DDX54-206ENST00000549271 C16orf86Q6ZW13 317 aa14.58□□□□□ -0.08
DDX54-206ENST00000549271 CCDC144CPQ8IYA2 1237 aa14.58□□□□□ -0.08
DDX54-206ENST00000549271 TET1Q8NFU7 2136 aa14.58□□□□□ -0.08
DDX54-206ENST00000549271 PHOSPHO2Q8TCD6 241 aa14.58□□□□□ -0.08
DDX54-206ENST00000549271 FBXL18Q96ME1 805 aa14.58□□□□□ -0.08
DDX54-206ENST00000549271 GOPCQ9HD26 462 aa14.58□□□□□ -0.08
DDX54-206ENST00000549271 LMCD1Q9NZU5 365 aa14.58□□□□□ -0.08
DDX54-206ENST00000549271 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.57□□□□□ -0.08
DDX54-206ENST00000549271 USP17L12C9JPN9 530 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 USP17L21D6R901 530 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 ALADP13716 330 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 TNFAIP2Q03169 654 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 FSCN1Q16658 493 aaKnown RBP14.57□□□□□ -0.08
DDX54-206ENST00000549271 SLFNL1Q499Z3 407 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 SPRED2Q7Z698 418 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 AMOTL1Q8IY63 956 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 DDRGK1Q96HY6 314 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 CRBNQ96SW2 442 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 SLF1Q9BQI6 1058 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 KANSL2Q9H9L4 492 aa14.57□□□□□ -0.08
DDX54-206ENST00000549271 CFAP54Q96N23 3096 aa14.56□□□□□ -0.08
DDX54-206ENST00000549271 PSMC6P62333 389 aa14.56□□□□□ -0.08
DDX54-206ENST00000549271 LEXMQ3ZCV2 418 aa14.56□□□□□ -0.08
DDX54-206ENST00000549271 DEFB128Q7Z7B8 93 aa14.56□□□□□ -0.08
DDX54-206ENST00000549271 TLK2Q86UE8 772 aa14.56□□□□□ -0.08
DDX54-206ENST00000549271 HERC6Q8IVU3 1022 aa14.56□□□□□ -0.08
DDX54-206ENST00000549271 UIMC1Q96RL1 719 aa14.56□□□□□ -0.08
DDX54-206ENST00000549271 ALDH8A1Q9H2A2 487 aaPredicted RBP14.56□□□□□ -0.08
DDX54-206ENST00000549271 CYP2D7A0A087X1C5 515 aa14.55□□□□□ -0.08
DDX54-206ENST00000549271 ACTN1P12814 892 aa14.55□□□□□ -0.08
DDX54-206ENST00000549271 PTGS1P23219 599 aa14.55□□□□□ -0.08
DDX54-206ENST00000549271 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
DDX54-206ENST00000549271 ANKRD35Q8N283 1001 aa14.55□□□□□ -0.08
DDX54-206ENST00000549271 PRPF38AQ8NAV1 312 aaKnown RBP14.55□□□□□ -0.08
DDX54-206ENST00000549271 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.55□□□□□ -0.08
DDX54-206ENST00000549271 NUP88Q99567 741 aaPredicted RBP14.55□□□□□ -0.08
DDX54-206ENST00000549271 PUS7LQ9H0K6 701 aaKnown RBP14.55□□□□□ -0.08
DDX54-206ENST00000549271 UBE2ZQ9H832 354 aaPredicted RBP14.55□□□□□ -0.08
DDX54-206ENST00000549271 ARPP21Q9UBL0 812 aaPredicted RBP14.55□□□□□ -0.08
DDX54-206ENST00000549271 SLC4A4Q9Y6R1 1079 aa14.55□□□□□ -0.08
DDX54-206ENST00000549271 POTEB3A0JP26 581 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 ZEB2O60315 1214 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 CHGBP05060 677 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 CYP2C9P11712 490 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 RFC2P35250 354 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 CSPP1Q1MSJ5 1256 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 SBK1Q52WX2 424 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 GIMAP6Q6P9H5 292 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 POTEBQ6S5H4 581 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 CPXCR1Q8N123 301 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 FAM133AQ8N9E0 248 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 STRBPQ96SI9 672 aaKnown RBP14.54□□□□□ -0.08
DDX54-206ENST00000549271 AP5M1Q9H0R1 490 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 FBXO40Q9UH90 709 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 SIP14410 1827 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 MYH4Q9Y623 1939 aa14.54□□□□□ -0.08
DDX54-206ENST00000549271 SCN10AQ9Y5Y9 1956 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 KIF28PB7ZC32 967 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 DYNC1LI2O43237 492 aaPredicted RBP14.53□□□□□ -0.08
DDX54-206ENST00000549271 RAD21O60216 631 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 SUPT20HL2P0C7V6 817 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 IL9P15248 144 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 SMPD1P17405 629 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 CNTN2Q02246 1040 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 NOL8Q76FK4 1167 aaKnown RBP14.53□□□□□ -0.08
DDX54-206ENST00000549271 CHST13Q8NET6 341 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.53□□□□□ -0.08
DDX54-206ENST00000549271 SLC38A10Q9HBR0 1119 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 RAVER2Q9HCJ3 691 aaKnown RBP14.53□□□□□ -0.08
DDX54-206ENST00000549271 ECHDC1Q9NTX5 307 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 TRMT13Q9NUP7 481 aaKnown RBP14.53□□□□□ -0.08
DDX54-206ENST00000549271 Q9Y3F1 56 aa14.53□□□□□ -0.08
DDX54-206ENST00000549271 TNKSO95271 1327 aa14.52□□□□□ -0.08
DDX54-206ENST00000549271 LCHNA4D1U4 455 aa14.52□□□□□ -0.09
DDX54-206ENST00000549271 DCXO43602 365 aa14.52□□□□□ -0.09
DDX54-206ENST00000549271 ZBED4O75132 1171 aa14.52□□□□□ -0.09
DDX54-206ENST00000549271 SSTR3P32745 418 aaPredicted RBP14.52□□□□□ -0.09
DDX54-206ENST00000549271 OAZ1P54368 228 aa14.52□□□□□ -0.09
DDX54-206ENST00000549271 KBTBD3Q8NAB2 608 aa14.52□□□□□ -0.09
DDX54-206ENST00000549271 GDPD5Q8WTR4 605 aa14.52□□□□□ -0.09
DDX54-206ENST00000549271 TRIP12Q14669 1992 aaPredicted RBP14.52□□□□□ -0.09
DDX54-206ENST00000549271 LCTP09848 1927 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms