RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 ADGRF4Q8IZF3 695 aa17.25■□□□□ 0.35
CCDC38-205ENST00000546947 MTA3Q9BTC8 594 aa17.25■□□□□ 0.35
CCDC38-205ENST00000546947 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
CCDC38-205ENST00000546947 ABHD16BQ9H3Z7 469 aa17.25■□□□□ 0.35
CCDC38-205ENST00000546947 LRRC37A2A6NM11 1700 aa17.24■□□□□ 0.35
CCDC38-205ENST00000546947 SOWAHBA6NEL2 793 aa17.24■□□□□ 0.35
CCDC38-205ENST00000546947 KBTBD13C9JR72 458 aa17.24■□□□□ 0.35
CCDC38-205ENST00000546947 H0YGN5 161 aa17.24■□□□□ 0.35
CCDC38-205ENST00000546947 SLC27A2O14975 620 aa17.24■□□□□ 0.35
CCDC38-205ENST00000546947 ACVR2BQ13705 512 aa17.24■□□□□ 0.35
CCDC38-205ENST00000546947 CDC37Q16543 378 aaPredicted RBP17.24■□□□□ 0.35
CCDC38-205ENST00000546947 CLEC4DQ8WXI8 215 aa17.24■□□□□ 0.35
CCDC38-205ENST00000546947 MAF1Q9H063 256 aa17.24■□□□□ 0.35
CCDC38-205ENST00000546947 CPVLQ9H3G5 476 aa17.24■□□□□ 0.35
CCDC38-205ENST00000546947 ZHX1Q9UKY1 873 aaPredicted RBP17.24■□□□□ 0.35
CCDC38-205ENST00000546947 FAM184BQ9ULE4 1060 aa17.24■□□□□ 0.35
CCDC38-205ENST00000546947 NFIBO00712 420 aa17.23■□□□□ 0.35
CCDC38-205ENST00000546947 ANTXR2P58335 489 aa17.23■□□□□ 0.35
CCDC38-205ENST00000546947 LRRC41Q15345 812 aa17.23■□□□□ 0.35
CCDC38-205ENST00000546947 TMEM67Q5HYA8 995 aa17.23■□□□□ 0.35
CCDC38-205ENST00000546947 GJC2Q5T442 439 aaPredicted RBP17.23■□□□□ 0.35
CCDC38-205ENST00000546947 RNF20Q5VTR2 975 aa17.23■□□□□ 0.35
CCDC38-205ENST00000546947 CHST3Q7LGC8 479 aa17.23■□□□□ 0.35
CCDC38-205ENST00000546947 CCDC144CPQ8IYA2 1237 aa17.23■□□□□ 0.35
CCDC38-205ENST00000546947 IGDCC4Q8TDY8 1250 aa17.23■□□□□ 0.35
CCDC38-205ENST00000546947 SENP6Q9GZR1 1112 aaPredicted RBP17.23■□□□□ 0.35
CCDC38-205ENST00000546947 XPNPEP3Q9NQH7 507 aa17.23■□□□□ 0.35
CCDC38-205ENST00000546947 MAD2L2Q9UI95 211 aa17.23■□□□□ 0.35
CCDC38-205ENST00000546947 ABCB11O95342 1321 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 LOC102724159A0A0B4J2E5 919 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 PTPDC1A2A3K4 754 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 PALM3A6NDB9 673 aaPredicted RBP17.22■□□□□ 0.35
CCDC38-205ENST00000546947 KLRF2D3W0D1 207 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 DHX16O60231 1041 aaKnown RBP17.22■□□□□ 0.35
CCDC38-205ENST00000546947 MCM5P33992 734 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 BAATQ14032 418 aaPredicted RBP17.22■□□□□ 0.35
CCDC38-205ENST00000546947 GRM4Q14833 912 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 PWP2Q15269 919 aaKnown RBP17.22■□□□□ 0.35
CCDC38-205ENST00000546947 USH1GQ495M9 461 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 RNF207Q6ZRF8 634 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 RNF180Q86T96 592 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 STAG2Q8N3U4 1231 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 RGS22Q8NE09 1264 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 KATNBL1Q9H079 304 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 JMJD4Q9H9V9 463 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 PPP4R2Q9NY27 417 aa17.22■□□□□ 0.35
CCDC38-205ENST00000546947 ADD3Q9UEY8 706 aaKnown RBP17.22■□□□□ 0.35
CCDC38-205ENST00000546947 ASTN1O14525 1302 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 PRC1O43663 620 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 DUSP11O75319 330 aaKnown RBP17.21■□□□□ 0.35
CCDC38-205ENST00000546947 TROAPQ12815 778 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 QRICH1Q2TAL8 776 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 CATIPQ7Z7H3 387 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 FBXO11Q86XK2 927 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 C7orf61Q8IZ16 206 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 TMTC2Q8N394 836 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 MORC4Q8TE76 937 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 TMEM87BQ96K49 555 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 SENP2Q9HC62 589 aa17.21■□□□□ 0.35
CCDC38-205ENST00000546947 ALDH5A1P51649 535 aaPredicted RBP17.2■□□□□ 0.34
CCDC38-205ENST00000546947 RPS6P62753 249 aaKnown RBP17.2■□□□□ 0.34
CCDC38-205ENST00000546947 LRRC26Q2I0M4 334 aa17.2■□□□□ 0.34
CCDC38-205ENST00000546947 CCDC144BQ3MJ40 725 aa17.2■□□□□ 0.34
CCDC38-205ENST00000546947 SLC30A10Q6XR72 485 aa17.2■□□□□ 0.34
CCDC38-205ENST00000546947 MTMR8Q96EF0 704 aa17.2■□□□□ 0.34
CCDC38-205ENST00000546947 MAP3K14Q99558 947 aa17.2■□□□□ 0.34
CCDC38-205ENST00000546947 LY9Q9HBG7 655 aa17.2■□□□□ 0.34
CCDC38-205ENST00000546947 VAT1LQ9HCJ6 419 aa17.2■□□□□ 0.34
CCDC38-205ENST00000546947 ADAMTS4O75173 837 aa17.19■□□□□ 0.34
CCDC38-205ENST00000546947 DDAH1O94760 285 aa17.19■□□□□ 0.34
CCDC38-205ENST00000546947 PGK1P00558 417 aa17.19■□□□□ 0.34
CCDC38-205ENST00000546947 MYCNP04198 464 aaPredicted RBP17.19■□□□□ 0.34
CCDC38-205ENST00000546947 CALML3P27482 149 aa17.19■□□□□ 0.34
CCDC38-205ENST00000546947 DNERQ8NFT8 737 aa17.19■□□□□ 0.34
CCDC38-205ENST00000546947 LENG1Q96BZ8 264 aaPredicted RBP17.19■□□□□ 0.34
CCDC38-205ENST00000546947 MPHOSPH6Q99547 160 aaKnown RBP17.19■□□□□ 0.34
CCDC38-205ENST00000546947 TSEN34Q9BSV6 310 aaKnown RBP17.19■□□□□ 0.34
CCDC38-205ENST00000546947 RIOX1Q9H6W3 641 aa17.19■□□□□ 0.34
CCDC38-205ENST00000546947 MRPL11Q9Y3B7 192 aaKnown RBP17.19■□□□□ 0.34
CCDC38-205ENST00000546947 SYNRGQ9UMZ2 1314 aa17.19■□□□□ 0.34
CCDC38-205ENST00000546947 SH2B2O14492 632 aaPredicted RBP17.18■□□□□ 0.34
CCDC38-205ENST00000546947 ZBTB5O15062 677 aa17.18■□□□□ 0.34
CCDC38-205ENST00000546947 LIFRP42702 1097 aa17.18■□□□□ 0.34
CCDC38-205ENST00000546947 TRAF1Q13077 416 aa17.18■□□□□ 0.34
CCDC38-205ENST00000546947 TSGA10IPQ3SY00 556 aa17.18■□□□□ 0.34
CCDC38-205ENST00000546947 MCF2L2Q86YR7 1114 aa17.18■□□□□ 0.34
CCDC38-205ENST00000546947 ZNF654Q8IZM8 581 aa17.18■□□□□ 0.34
CCDC38-205ENST00000546947 PURBQ96QR8 312 aaKnown RBP17.18■□□□□ 0.34
CCDC38-205ENST00000546947 AMNQ9BXJ7 453 aa17.18■□□□□ 0.34
CCDC38-205ENST00000546947 SPC25Q9HBM1 224 aa17.18■□□□□ 0.34
CCDC38-205ENST00000546947 VTA1Q9NP79 307 aa17.18■□□□□ 0.34
CCDC38-205ENST00000546947 PHF24Q9UPV7 400 aa17.18■□□□□ 0.34
CCDC38-205ENST00000546947 CCDC69A6NI79 296 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 B4DLN1 442 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 ADCY6O43306 1168 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
CCDC38-205ENST00000546947 ADCYAP1R1P41586 468 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 MRPL12P52815 198 aaKnown RBP17.17■□□□□ 0.34
CCDC38-205ENST00000546947 ATN1P54259 1190 aaPredicted RBP17.17■□□□□ 0.34
CCDC38-205ENST00000546947 GJA9P57773 515 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms