RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CPVLQ9H3G5 476 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 ABHD16BQ9H3Z7 469 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.54■□□□□ 0.56
DDX54-204ENST00000546898 PCDH10Q9P2E7 1040 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 NR2E3Q9Y5X4 410 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 LOC102724159A0A0B4J2E5 919 aa18.53■□□□□ 0.56
DDX54-204ENST00000546898 SOWAHBA6NEL2 793 aa18.53■□□□□ 0.56
DDX54-204ENST00000546898 NFIBO00712 420 aa18.53■□□□□ 0.56
DDX54-204ENST00000546898 TAL1P17542 331 aaPredicted RBP18.53■□□□□ 0.56
DDX54-204ENST00000546898 GRM4Q14833 912 aa18.53■□□□□ 0.56
DDX54-204ENST00000546898 PWP2Q15269 919 aaKnown RBP18.53■□□□□ 0.56
DDX54-204ENST00000546898 CHST3Q7LGC8 479 aa18.53■□□□□ 0.56
DDX54-204ENST00000546898 IGDCC4Q8TDY8 1250 aa18.53■□□□□ 0.56
DDX54-204ENST00000546898 TMEM87BQ96K49 555 aa18.53■□□□□ 0.56
DDX54-204ENST00000546898 ADD3Q9UEY8 706 aaKnown RBP18.53■□□□□ 0.56
DDX54-204ENST00000546898 MAD2L2Q9UI95 211 aa18.53■□□□□ 0.56
DDX54-204ENST00000546898 ZHX1Q9UKY1 873 aaPredicted RBP18.53■□□□□ 0.56
DDX54-204ENST00000546898 ABCB11O95342 1321 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 PALM3A6NDB9 673 aaPredicted RBP18.52■□□□□ 0.56
DDX54-204ENST00000546898 KBTBD13C9JR72 458 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 KLRF2D3W0D1 207 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 PRC1O43663 620 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 DHX16O60231 1041 aaKnown RBP18.52■□□□□ 0.56
DDX54-204ENST00000546898 EVI5O60447 810 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 TROAPQ12815 778 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 ACVR2BQ13705 512 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 CATIPQ7Z7H3 387 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 CCDC144CPQ8IYA2 1237 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 STAG2Q8N3U4 1231 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 CLEC4DQ8WXI8 215 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 JMJD4Q9H9V9 463 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 XPNPEP3Q9NQH7 507 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 FAM184BQ9ULE4 1060 aa18.52■□□□□ 0.56
DDX54-204ENST00000546898 BAZ2BQ9UIF8 2168 aaKnown RBP18.52■□□□□ 0.56
DDX54-204ENST00000546898 DDAH1O94760 285 aa18.51■□□□□ 0.55
DDX54-204ENST00000546898 BAATQ14032 418 aaPredicted RBP18.51■□□□□ 0.55
DDX54-204ENST00000546898 QRICH1Q2TAL8 776 aa18.51■□□□□ 0.55
DDX54-204ENST00000546898 USH1GQ495M9 461 aa18.51■□□□□ 0.55
DDX54-204ENST00000546898 ANO1Q5XXA6 986 aa18.51■□□□□ 0.55
DDX54-204ENST00000546898 RNF207Q6ZRF8 634 aa18.51■□□□□ 0.55
DDX54-204ENST00000546898 TMTC2Q8N394 836 aa18.51■□□□□ 0.55
DDX54-204ENST00000546898 RGS22Q8NE09 1264 aa18.51■□□□□ 0.55
DDX54-204ENST00000546898 MAP3K14Q99558 947 aa18.51■□□□□ 0.55
DDX54-204ENST00000546898 LY9Q9HBG7 655 aa18.51■□□□□ 0.55
DDX54-204ENST00000546898 SENP2Q9HC62 589 aa18.51■□□□□ 0.55
DDX54-204ENST00000546898 ASTN1O14525 1302 aa18.5■□□□□ 0.55
DDX54-204ENST00000546898 PTPDC1A2A3K4 754 aa18.5■□□□□ 0.55
DDX54-204ENST00000546898 SH2B2O14492 632 aaPredicted RBP18.5■□□□□ 0.55
DDX54-204ENST00000546898 TSGA10IPQ3SY00 556 aa18.5■□□□□ 0.55
DDX54-204ENST00000546898 GJC2Q5T442 439 aaPredicted RBP18.5■□□□□ 0.55
DDX54-204ENST00000546898 RNF180Q86T96 592 aa18.5■□□□□ 0.55
DDX54-204ENST00000546898 FBXO11Q86XK2 927 aa18.5■□□□□ 0.55
DDX54-204ENST00000546898 MORC4Q8TE76 937 aa18.5■□□□□ 0.55
DDX54-204ENST00000546898 MTMR8Q96EF0 704 aa18.5■□□□□ 0.55
DDX54-204ENST00000546898 KATNBL1Q9H079 304 aa18.5■□□□□ 0.55
DDX54-204ENST00000546898 H0YGN5 161 aa18.49■□□□□ 0.55
DDX54-204ENST00000546898 LIFRP42702 1097 aa18.49■□□□□ 0.55
DDX54-204ENST00000546898 ALDH5A1P51649 535 aaPredicted RBP18.49■□□□□ 0.55
DDX54-204ENST00000546898 RPS6P62753 249 aaKnown RBP18.49■□□□□ 0.55
DDX54-204ENST00000546898 TRAF1Q13077 416 aa18.49■□□□□ 0.55
DDX54-204ENST00000546898 KRT32Q14532 448 aa18.49■□□□□ 0.55
DDX54-204ENST00000546898 LRRC41Q15345 812 aa18.49■□□□□ 0.55
DDX54-204ENST00000546898 SLC30A10Q6XR72 485 aa18.49■□□□□ 0.55
DDX54-204ENST00000546898 ZNF654Q8IZM8 581 aa18.49■□□□□ 0.55
DDX54-204ENST00000546898 MPHOSPH6Q99547 160 aaKnown RBP18.49■□□□□ 0.55
DDX54-204ENST00000546898 AMNQ9BXJ7 453 aa18.49■□□□□ 0.55
DDX54-204ENST00000546898 RIOX1Q9H6W3 641 aa18.49■□□□□ 0.55
DDX54-204ENST00000546898 VAT1LQ9HCJ6 419 aa18.49■□□□□ 0.55
DDX54-204ENST00000546898 MRPL11Q9Y3B7 192 aaKnown RBP18.49■□□□□ 0.55
DDX54-204ENST00000546898 CCDC69A6NI79 296 aa18.48■□□□□ 0.55
DDX54-204ENST00000546898 ZBTB5O15062 677 aa18.48■□□□□ 0.55
DDX54-204ENST00000546898 DUSP11O75319 330 aaKnown RBP18.48■□□□□ 0.55
DDX54-204ENST00000546898 CALML3P27482 149 aa18.48■□□□□ 0.55
DDX54-204ENST00000546898 KIF5BP33176 963 aa18.48■□□□□ 0.55
DDX54-204ENST00000546898 CCDC144BQ3MJ40 725 aa18.48■□□□□ 0.55
DDX54-204ENST00000546898 MCF2L2Q86YR7 1114 aa18.48■□□□□ 0.55
DDX54-204ENST00000546898 DNERQ8NFT8 737 aa18.48■□□□□ 0.55
DDX54-204ENST00000546898 CTCFLQ8NI51 663 aaPredicted RBP18.48■□□□□ 0.55
DDX54-204ENST00000546898 NEK1Q96PY6 1258 aa18.48■□□□□ 0.55
DDX54-204ENST00000546898 SENP6Q9GZR1 1112 aaPredicted RBP18.48■□□□□ 0.55
DDX54-204ENST00000546898 VTA1Q9NP79 307 aa18.48■□□□□ 0.55
DDX54-204ENST00000546898 SYNRGQ9UMZ2 1314 aa18.48■□□□□ 0.55
DDX54-204ENST00000546898 ADAMTS4O75173 837 aa18.47■□□□□ 0.55
DDX54-204ENST00000546898 REC8O95072 547 aa18.47■□□□□ 0.55
DDX54-204ENST00000546898 NFXL1Q6ZNB6 911 aa18.47■□□□□ 0.55
DDX54-204ENST00000546898 NUP133Q8WUM0 1156 aa18.47■□□□□ 0.55
DDX54-204ENST00000546898 PHF24Q9UPV7 400 aa18.47■□□□□ 0.55
DDX54-204ENST00000546898 KIAA1217Q5T5P2 1943 aa18.47■□□□□ 0.55
DDX54-204ENST00000546898 B4DLN1 442 aa18.46■□□□□ 0.55
DDX54-204ENST00000546898 EPB41L2O43491 1005 aaKnown RBP18.46■□□□□ 0.55
DDX54-204ENST00000546898 PGK1P00558 417 aa18.46■□□□□ 0.55
DDX54-204ENST00000546898 MYCNP04198 464 aaPredicted RBP18.46■□□□□ 0.55
DDX54-204ENST00000546898 CALM1P0DP23 149 aa18.46■□□□□ 0.55
DDX54-204ENST00000546898 CALM2P0DP24 149 aa18.46■□□□□ 0.55
DDX54-204ENST00000546898 CALM3P0DP25 149 aa18.46■□□□□ 0.55
DDX54-204ENST00000546898 CST5P28325 142 aaPredicted RBP18.46■□□□□ 0.55
DDX54-204ENST00000546898 MRPL12P52815 198 aaKnown RBP18.46■□□□□ 0.55
DDX54-204ENST00000546898 SGMS1Q86VZ5 419 aa18.46■□□□□ 0.55
DDX54-204ENST00000546898 C7orf61Q8IZ16 206 aa18.46■□□□□ 0.55
DDX54-204ENST00000546898 LENG1Q96BZ8 264 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms